RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 SRSF12Q8WXF0 261 aaKnown RBP7.54□□□□□ -1.2
NUDCD3-203ENST00000460110 SEBOXQ9HB31 216 aaPredicted RBP7.54□□□□□ -1.2
NUDCD3-203ENST00000460110 PGPEP1LA6NFU8 196 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 PMS2P5A8MQ11 134 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 FOXH1O75593 365 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 IGHV4-39P01824 125 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 SRP19P09132 144 aaKnown RBP7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 ATP5G3P48201 142 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 MEF2BQ02080 365 aaPredicted RBP7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 RUSC1-AS1Q66K80 236 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 TET2Q6N021 2002 aaPredicted RBP7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 ZNF343Q6P1L6 599 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 SLC25A33Q9BSK2 321 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 VAX2Q9UIW0 290 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 JMJD1CQ15652 2540 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 DSCAML1Q8TD84 2053 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 A0A087X0M5 115 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 A0A1B0GX30 115 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 UBE2CO00762 179 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 NDUFB4O95168 129 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 TMEM11P17152 192 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 PDLIM4P50479 330 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 LYZP61626 148 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 RHOBP62745 196 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 TMEM177Q53S58 311 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 LEMD1Q68G75 181 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 Q8N7P7 452 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 P2RX4Q99571 388 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 SIGLEC9Q9Y336 463 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 CBY1Q9Y3M2 126 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 TRAV5A0A0B4J249 113 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 TMEM8BA6NDV4 472 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 AP4M1O00189 453 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 RNASE2P10153 161 aaKnown RBP7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 AGAP20933 346 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 DLX6P56179 175 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 SSBP2P81877 361 aaPredicted RBP7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 PRSS8Q16651 343 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 KHDC3LQ587J8 217 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 LDLRAD2Q5SZI1 272 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 MRPL41Q8IXM3 137 aaKnown RBP7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 OR52E5Q8NH55 327 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 TVP23CQ96ET8 276 aa7.53□□□□□ -1.2
NUDCD3-203ENST00000460110 TPTE2P1Q5T6R2 138 aa7.52□□□□□ -1.21
NUDCD3-203ENST00000460110 OR10D4PQ8NGN7 298 aa7.52□□□□□ -1.21
NUDCD3-203ENST00000460110 TMEM167AQ8TBQ9 72 aa7.52□□□□□ -1.21
NUDCD3-203ENST00000460110 MS4A10Q96PG2 267 aa7.52□□□□□ -1.21
NUDCD3-203ENST00000460110 GAB2Q9UQC2 676 aa7.52□□□□□ -1.21
NUDCD3-203ENST00000460110 TRAV40A0A0B4J280 105 aa7.52□□□□□ -1.21
NUDCD3-203ENST00000460110 LOC102723971A0A1B0GUV8 181 aa7.52□□□□□ -1.21
NUDCD3-203ENST00000460110 TNFRSF13BO14836 293 aaPredicted RBP7.52□□□□□ -1.21
NUDCD3-203ENST00000460110 MT-ND4LP03901 98 aa7.52□□□□□ -1.21
NUDCD3-203ENST00000460110 PRTN3P24158 256 aa7.52□□□□□ -1.21
NUDCD3-203ENST00000460110 C11orf71Q6IPW1 123 aa7.52□□□□□ -1.21
NUDCD3-203ENST00000460110 ST6GALNAC6Q969X2 333 aa7.52□□□□□ -1.21
NUDCD3-203ENST00000460110 EAF1Q96JC9 268 aaPredicted RBP7.52□□□□□ -1.21
NUDCD3-203ENST00000460110 GNB4Q9HAV0 340 aa7.52□□□□□ -1.21
NUDCD3-203ENST00000460110 GAR1Q9NY12 217 aaKnown RBP7.52□□□□□ -1.21
NUDCD3-203ENST00000460110 COLCA2A8K830 154 aa7.52□□□□□ -1.21
NUDCD3-203ENST00000460110 IGLV1-47P01700 117 aa7.52□□□□□ -1.21
NUDCD3-203ENST00000460110 SUMO1P63165 101 aaKnown RBP7.52□□□□□ -1.21
NUDCD3-203ENST00000460110 HIST2H2BCQ6DN03 193 aa7.52□□□□□ -1.21
NUDCD3-203ENST00000460110 WNT10AQ9GZT5 417 aa7.52□□□□□ -1.21
NUDCD3-203ENST00000460110 IGHV4-61A0A0C4DH41 118 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 VENTXO95231 258 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 CD69Q07108 199 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 RHEBQ15382 184 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 DTX2Q86UW9 622 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 C15orf54Q8N8G6 183 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 HIST1H2BAQ96A08 127 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 PIMREGQ9BSJ6 248 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 C7orf69Q9H7B7 122 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 NDUFA4L2Q9NRX3 87 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 CARHSP1Q9Y2V2 147 aaKnown RBP7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 MGST1P10620 155 aaKnown RBP7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 SAA4P35542 130 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 TAS2R60P59551 318 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 RANP62826 216 aaKnown RBP7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 UBE2L3P68036 154 aaKnown RBP7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 Q56UQ5 140 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 SP5Q6BEB4 398 aaPredicted RBP7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 SPNS3Q6ZMD2 512 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 C14orf144Q96I85 54 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 TMEM68Q96MH6 324 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 DERL1Q9BUN8 251 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 FNDC4Q9H6D8 234 aaPredicted RBP7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 LINC00574Q9H8X3 128 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 KCNIP2Q9NS61 270 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 SERTAD4Q9NUC0 356 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 SORL1Q92673 2214 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 IGHV3OR16-13A0A075B7E8 117 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 IGHV3-74A0A0B4J1X5 117 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 FAM90A9PA6NNJ1 464 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 ZNF506Q5JVG8 444 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 ZNF257Q9Y2Q1 563 aa7.51□□□□□ -1.21
NUDCD3-203ENST00000460110 NBR2O15453 112 aa7.5□□□□□ -1.21
NUDCD3-203ENST00000460110 SPINK4O60575 86 aa7.5□□□□□ -1.21
NUDCD3-203ENST00000460110 MPDU1O75352 247 aa7.5□□□□□ -1.21
NUDCD3-203ENST00000460110 TMEM241Q24JQ0 296 aa7.5□□□□□ -1.21
NUDCD3-203ENST00000460110 FAM120AOSQ5T036 256 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms