RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 LINC00305Q7Z4B0 112 aa8.22□□□□□ -1.09
UFD1-205ENST00000459854 TMEM144Q7Z5S9 345 aa8.22□□□□□ -1.09
UFD1-205ENST00000459854 C9orf40Q8IXQ3 194 aa8.22□□□□□ -1.09
UFD1-205ENST00000459854 CCL17Q92583 94 aa8.22□□□□□ -1.09
UFD1-205ENST00000459854 CALYQ9NYX4 217 aa8.22□□□□□ -1.09
UFD1-205ENST00000459854 ASIPP42127 132 aa8.21□□□□□ -1.09
UFD1-205ENST00000459854 UNQ5815/PRO19632Q6UWF5 114 aa8.21□□□□□ -1.09
UFD1-205ENST00000459854 LHFPL4Q7Z7J7 247 aa8.21□□□□□ -1.09
UFD1-205ENST00000459854 FER1L6-AS1Q8NA97 138 aa8.21□□□□□ -1.09
UFD1-205ENST00000459854 TMUB1Q9BVT8 246 aa8.21□□□□□ -1.09
UFD1-205ENST00000459854 HES7Q9BYE0 225 aa8.21□□□□□ -1.09
UFD1-205ENST00000459854 FHL5Q5TD97 284 aa8.21□□□□□ -1.1
UFD1-205ENST00000459854 IFI27L1Q96BM0 104 aa8.21□□□□□ -1.1
UFD1-205ENST00000459854 ATP6V0BQ99437 205 aa8.21□□□□□ -1.1
UFD1-205ENST00000459854 ZNF71Q9NQZ8 489 aaPredicted RBP8.21□□□□□ -1.1
UFD1-205ENST00000459854 ERG28Q9UKR5 140 aa8.21□□□□□ -1.1
UFD1-205ENST00000459854 H0YIZ8 118 aa8.21□□□□□ -1.1
UFD1-205ENST00000459854 PAX1P15863 534 aa8.21□□□□□ -1.1
UFD1-205ENST00000459854 FOXL2P58012 376 aa8.21□□□□□ -1.1
UFD1-205ENST00000459854 SLC25A48Q6ZT89 311 aaKnown RBP8.21□□□□□ -1.1
UFD1-205ENST00000459854 OR5P3Q8WZ94 311 aa8.21□□□□□ -1.1
UFD1-205ENST00000459854 RSPO3Q9BXY4 272 aaPredicted RBP8.21□□□□□ -1.1
UFD1-205ENST00000459854 TRAV5A0A0B4J249 113 aa8.21□□□□□ -1.1
UFD1-205ENST00000459854 CENPVL1A0A0U1RR11 272 aa8.21□□□□□ -1.1
UFD1-205ENST00000459854 TMEM229AB2RXF0 380 aa8.21□□□□□ -1.1
UFD1-205ENST00000459854 DTX1Q86Y01 620 aa8.21□□□□□ -1.1
UFD1-205ENST00000459854 ASCL2Q99929 193 aa8.21□□□□□ -1.1
UFD1-205ENST00000459854 SCN3AQ9NY46 2000 aa8.21□□□□□ -1.1
UFD1-205ENST00000459854 DKK1O94907 266 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 LEPP41159 167 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 CDKN1BP46527 198 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 TMEM54Q969K7 222 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 CITED1Q99966 193 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 GTSF1LQ9H1H1 148 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 SPTBP11277 2137 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 LHX2P50458 406 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 PMVKQ15126 192 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 TM4SF20Q53R12 229 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 ATP1A1-AS1Q5TC04 95 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 GFI1BQ5VTD9 330 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 IMMP1LQ96LU5 166 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 TMEM238C9JI98 176 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 RPRMLQ8N4K4 120 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 FAM89BQ8N5H3 189 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 ACACAQ13085 2346 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 F2Z2F3 143 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 J3QRE1 110 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 PPIHO43447 177 aaKnown RBP8.2□□□□□ -1.1
UFD1-205ENST00000459854 SNAI2O43623 268 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 LGALS1P09382 135 aaKnown RBP8.2□□□□□ -1.1
UFD1-205ENST00000459854 C10orf91Q5T1B1 145 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 CTHRC1Q96CG8 243 aa8.2□□□□□ -1.1
UFD1-205ENST00000459854 IGKV1D-42A0A075B6H8 117 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 F8W1H4 67 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 PSG1P11464 419 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 COQ2Q96H96 371 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 TMEM101Q96IK0 257 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 C18orf15Q96N68 181 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 EREGO14944 169 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 EGR1P18146 543 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 KLF17Q5JT82 389 aaPredicted RBP8.19□□□□□ -1.1
UFD1-205ENST00000459854 MDP1Q86V88 176 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 BOD1L2Q8IYS8 172 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 KIR3DL3Q8N743 410 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 TEX45Q8NA69 505 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 KLF2Q9Y5W3 355 aaPredicted RBP8.19□□□□□ -1.1
UFD1-205ENST00000459854 KMT2EQ8IZD2 1858 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 NINQ8N4C6 2090 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 HRKO00198 91 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 CD3EP07766 207 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 TFF3Q07654 80 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 FAM90A1Q86YD7 464 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 ABHD12Q8N2K0 398 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 RNF182Q8N6D2 247 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 ZNF385AQ96PM9 386 aaKnown RBP8.19□□□□□ -1.1
UFD1-205ENST00000459854 MAP1BP46821 2468 aaKnown RBP8.19□□□□□ -1.1
UFD1-205ENST00000459854 TRBV20-1A0A075B6N2 111 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 NPFFO15130 113 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 MLNRO43193 412 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 IGKV3-11P04433 115 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 FAM166AQ6J272 317 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 ASCL4Q6XD76 172 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 NPIPB3Q92617 1050 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 WDR83OSQ9Y284 106 aa8.19□□□□□ -1.1
UFD1-205ENST00000459854 BCL6BQ8N143 479 aaPredicted RBP8.18□□□□□ -1.1
UFD1-205ENST00000459854 OCC1Q8TAD7 63 aa8.18□□□□□ -1.1
UFD1-205ENST00000459854 SLC25A15Q9Y619 301 aa8.18□□□□□ -1.1
UFD1-205ENST00000459854 FAM106CPP0CH98 169 aa8.18□□□□□ -1.1
UFD1-205ENST00000459854 CNTFRP26992 372 aa8.18□□□□□ -1.1
UFD1-205ENST00000459854 SPINK14Q6IE38 97 aa8.18□□□□□ -1.1
UFD1-205ENST00000459854 SLC25A28Q96A46 364 aa8.18□□□□□ -1.1
UFD1-205ENST00000459854 SNHG12Q9BXW3 62 aa8.18□□□□□ -1.1
UFD1-205ENST00000459854 DKK4Q9UBT3 224 aa8.18□□□□□ -1.1
UFD1-205ENST00000459854 KLF12Q9Y4X4 402 aa8.18□□□□□ -1.1
UFD1-205ENST00000459854 PCDH15Q96QU1 1955 aa8.18□□□□□ -1.1
UFD1-205ENST00000459854 C3orf79P0CE67 100 aa8.18□□□□□ -1.1
UFD1-205ENST00000459854 KIR3DS1Q14943 382 aa8.18□□□□□ -1.1
UFD1-205ENST00000459854 WDR82Q6UXN9 313 aa8.18□□□□□ -1.1
UFD1-205ENST00000459854 FDCSPQ8NFU4 85 aa8.18□□□□□ -1.1
UFD1-205ENST00000459854 OR9G1Q8NH87 305 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms