RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 C10orf113Q5VZT2 155 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 CTRB2Q6GPI1 263 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 TEX38Q6PEX7 206 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 SPSB3Q6PJ21 355 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 BCL6BQ8N143 479 aaPredicted RBP4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 CIARTQ8N365 385 aaPredicted RBP4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 SIGLECL1Q8N7X8 197 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 STXBP6Q8NFX7 210 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 OR4X2Q8NGF9 303 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 GATAD1Q8WUU5 269 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 SFT2D1Q8WV19 159 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 NPIPB3Q92617 1050 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 HRH4Q9H3N8 390 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 C11orf1Q9H5F2 150 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 C21orf62Q9NYP8 219 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 WDR83OSQ9Y284 106 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 USP9XQ93008 2570 aaPredicted RBP4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 ZZEF1O43149 2961 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 TCRBV4S1A1TA0A5B7 111 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 TMEM89A2RUT3 159 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 PSMB11A5LHX3 300 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 ANKRD34BA5PLL1 514 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 BMPR1BO00238 502 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 TCF21O43680 179 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 HYPMO75409 117 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 CLN5O75503 358 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 OR2J3O76001 311 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 YIF1AO95070 293 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 LY6G6DO95868 133 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 CXorf1O96002 111 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 IGF1P05019 195 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 MYOD1P15172 320 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 S100A1P23297 94 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 CDC34P49427 236 aaPredicted RBP4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 PSMB3P49720 205 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 RHOGP84095 191 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 RUNX1Q01196 453 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 C15orf32Q32M92 178 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 BSXQ3C1V8 233 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 KHDC3LQ587J8 217 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 FAM74A1Q5RGS3 127 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 IL34Q6ZMJ4 242 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 CYP2G1PQ6ZSU1 146 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 IL17RELQ6ZVW7 336 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 TMEM116Q8NCL8 245 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 OR51G1Q8NGK1 321 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 OR4X1Q8NH49 305 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 MARC2Q969Z3 335 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 GRAMD2BQ96HH9 432 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 MS4A10Q96PG2 267 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 CITED4Q96RK1 184 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 ATP6V0BQ99437 205 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 TRGV9Q99603 122 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 RSG1Q9BU20 258 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 MRPL32Q9BYC8 188 aaKnown RBP4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 ARV1Q9H2C2 271 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 DNAJC4Q9NNZ3 241 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 CYTL1Q9NRR1 136 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 TECRQ9NZ01 308 aaKnown RBP4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 SLC45A2Q9UMX9 530 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 PXMP4Q9Y6I8 212 aa4.62□□□□□ -1.67
RNU1-88P-201ENST00000459274 CTXND1A0A1B0GTU2 59 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 MDFIC2A0A1B0GVS7 189 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 PMS2P5A8MQ11 134 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 TEX22C9J3V5 150 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 F6UZH7 168 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 ELANEP08246 267 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 LINC00869P0C866 280 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 ORM2P19652 201 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 YPEL3P61236 119 aaPredicted RBP4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 IFITM2Q01629 132 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 FAM106AQ4KMX7 169 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 KHDC1LQ5JSQ8 128 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 FAM78BQ5VT40 261 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 PVRIGQ6DKI7 326 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 FAM122CQ6P4D5 195 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 UQCC3Q6UW78 93 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 COMMD7Q86VX2 200 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 STPG3Q8N7X2 389 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 OR1B1Q8NGR6 318 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 SUN5Q8TC36 379 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 DPF1Q92782 380 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 BSCL2Q96G97 398 aaPredicted RBP4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 HSPB9Q9BQS6 159 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 SMDT1Q9H4I9 107 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 PRDM13Q9H4Q3 707 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 WFDC1Q9HC57 220 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 TREM1Q9NP99 234 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 ZNF580Q9UK33 172 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 HIGD1AQ9Y241 93 aa4.61□□□□□ -1.67
RNU1-88P-201ENST00000459274 UBR5O95071 2799 aaPredicted RBP4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 PTPN13Q12923 2485 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 LRRK2Q5S007 2527 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 IGLV11-55A0A075B6I3 123 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 IGHV3-21A0A0B4J1V1 117 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 A0A1B0GUS0 222 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 A0A1W2PS18 150 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 RAB19A4D1S5 217 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 MAP1LC3B2A6NCE7 125 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 DNAJC9-AS1A6NH13 148 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms