RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 IGLL5B9A064 214 aa15.66■□□□□ 0.1
CPNE1-220ENST00000458038 B3GALNT1O75752 331 aa15.66■□□□□ 0.1
CPNE1-220ENST00000458038 RNASE2P10153 161 aaKnown RBP15.66■□□□□ 0.1
CPNE1-220ENST00000458038 TBPP20226 339 aa15.66■□□□□ 0.1
CPNE1-220ENST00000458038 IZUMO4Q1ZYL8 232 aa15.66■□□□□ 0.1
CPNE1-220ENST00000458038 SPINK9Q5DT21 86 aa15.66■□□□□ 0.1
CPNE1-220ENST00000458038 RNASE10Q5GAN6 216 aaKnown RBP15.66■□□□□ 0.1
CPNE1-220ENST00000458038 TRPT1Q86TN4 253 aaKnown RBP15.66■□□□□ 0.1
CPNE1-220ENST00000458038 APLNQ9ULZ1 77 aa15.66■□□□□ 0.1
CPNE1-220ENST00000458038 DNAH10Q8IVF4 4471 aa15.66■□□□□ 0.1
CPNE1-220ENST00000458038 C3orf85A0A1B0GTC6 90 aa15.65■□□□□ 0.1
CPNE1-220ENST00000458038 M0QYG6 137 aa15.65■□□□□ 0.1
CPNE1-220ENST00000458038 ELK1P19419 428 aa15.65■□□□□ 0.1
CPNE1-220ENST00000458038 OPRK1P41145 380 aa15.65■□□□□ 0.1
CPNE1-220ENST00000458038 P2RY1P47900 373 aa15.65■□□□□ 0.1
CPNE1-220ENST00000458038 HOXA1P49639 335 aaPredicted RBP15.65■□□□□ 0.1
CPNE1-220ENST00000458038 PRR20EP86478 221 aa15.65■□□□□ 0.1
CPNE1-220ENST00000458038 PRR20CP86479 221 aa15.65■□□□□ 0.1
CPNE1-220ENST00000458038 PRR20DP86480 221 aa15.65■□□□□ 0.1
CPNE1-220ENST00000458038 PRR20BP86481 221 aa15.65■□□□□ 0.1
CPNE1-220ENST00000458038 PRR20AP86496 221 aa15.65■□□□□ 0.1
CPNE1-220ENST00000458038 LHFPL1Q86WI0 220 aa15.65■□□□□ 0.1
CPNE1-220ENST00000458038 FAM24BQ8N5W8 94 aa15.65■□□□□ 0.1
CPNE1-220ENST00000458038 STXBP6Q8NFX7 210 aa15.65■□□□□ 0.1
CPNE1-220ENST00000458038 ZFAND1Q8TCF1 268 aa15.65■□□□□ 0.1
CPNE1-220ENST00000458038 TMEM230Q96A57 120 aa15.65■□□□□ 0.1
CPNE1-220ENST00000458038 RRNAD1Q96FB5 475 aaKnown RBP15.65■□□□□ 0.1
CPNE1-220ENST00000458038 TP53RKQ96S44 253 aa15.65■□□□□ 0.1
CPNE1-220ENST00000458038 ZNF705EA8MWA4 302 aaPredicted RBP15.64■□□□□ 0.09
CPNE1-220ENST00000458038 GIG44P09565 113 aaPredicted RBP15.64■□□□□ 0.09
CPNE1-220ENST00000458038 ETV6P41212 452 aa15.64■□□□□ 0.09
CPNE1-220ENST00000458038 CCDC71LQ8N9Z2 235 aa15.64■□□□□ 0.09
CPNE1-220ENST00000458038 VPS13DQ5THJ4 4388 aa15.63■□□□□ 0.09
CPNE1-220ENST00000458038 TRAV10A0A0B4J240 114 aa15.63■□□□□ 0.09
CPNE1-220ENST00000458038 IGHV4-28A0A0C4DH34 117 aa15.63■□□□□ 0.09
CPNE1-220ENST00000458038 RPS10-NUDT3A0A1W2PQS6 291 aa15.63■□□□□ 0.09
CPNE1-220ENST00000458038 RBMY1A1P0DJD3 496 aaKnown RBP15.63■□□□□ 0.09
CPNE1-220ENST00000458038 RBMY1CP0DJD4 496 aa15.63■□□□□ 0.09
CPNE1-220ENST00000458038 AP2S1P53680 142 aaPredicted RBP15.63■□□□□ 0.09
CPNE1-220ENST00000458038 RBMY1FQ15415 496 aaKnown RBP15.63■□□□□ 0.09
CPNE1-220ENST00000458038 TRIM16LQ309B1 348 aa15.63■□□□□ 0.09
CPNE1-220ENST00000458038 MZT2AQ6P582 158 aa15.63■□□□□ 0.09
CPNE1-220ENST00000458038 FNDC4Q9H6D8 234 aaPredicted RBP15.63■□□□□ 0.09
CPNE1-220ENST00000458038 COPZ2Q9P299 210 aa15.63■□□□□ 0.09
CPNE1-220ENST00000458038 HELTA6NFD8 242 aa15.62■□□□□ 0.09
CPNE1-220ENST00000458038 TNFAIP8O95379 198 aa15.62■□□□□ 0.09
CPNE1-220ENST00000458038 PI3P19957 117 aa15.62■□□□□ 0.09
CPNE1-220ENST00000458038 HLA-DMBP28068 263 aa15.62■□□□□ 0.09
CPNE1-220ENST00000458038 RORCP51449 518 aa15.62■□□□□ 0.09
CPNE1-220ENST00000458038 BSXQ3C1V8 233 aa15.62■□□□□ 0.09
CPNE1-220ENST00000458038 FAM219AQ8IW50 185 aa15.62■□□□□ 0.09
CPNE1-220ENST00000458038 TERB2Q8NHR7 220 aa15.62■□□□□ 0.09
CPNE1-220ENST00000458038 DCANP1Q8TF63 244 aa15.62■□□□□ 0.09
CPNE1-220ENST00000458038 C15orf40Q8WUR7 153 aa15.62■□□□□ 0.09
CPNE1-220ENST00000458038 HECTD4Q9Y4D8 3996 aa15.61■□□□□ 0.09
CPNE1-220ENST00000458038 HPGDSO60760 199 aa15.61■□□□□ 0.09
CPNE1-220ENST00000458038 IGKV1-17P01599 117 aa15.61■□□□□ 0.09
CPNE1-220ENST00000458038 ZNF688P0C7X2 276 aa15.61■□□□□ 0.09
CPNE1-220ENST00000458038 UCP1P25874 307 aa15.61■□□□□ 0.09
CPNE1-220ENST00000458038 HTR2BP41595 481 aa15.61■□□□□ 0.09
CPNE1-220ENST00000458038 SPCS3P61009 180 aa15.61■□□□□ 0.09
CPNE1-220ENST00000458038 AARDQ4LEZ3 155 aa15.61■□□□□ 0.09
CPNE1-220ENST00000458038 OR52E5Q8NH55 327 aa15.61■□□□□ 0.09
CPNE1-220ENST00000458038 RNASE11Q8TAA1 199 aaKnown RBP15.61■□□□□ 0.09
CPNE1-220ENST00000458038 KLK11Q9UBX7 282 aa15.61■□□□□ 0.09
CPNE1-220ENST00000458038 CD3DP04234 171 aa15.6■□□□□ 0.09
CPNE1-220ENST00000458038 PPP5CP53041 499 aa15.6■□□□□ 0.09
CPNE1-220ENST00000458038 RNF126Q9BV68 326 aa15.6■□□□□ 0.09
CPNE1-220ENST00000458038 FUNDC2Q9BWH2 189 aa15.6■□□□□ 0.09
CPNE1-220ENST00000458038 SEPSECSQ9HD40 501 aaKnown RBP15.6■□□□□ 0.09
CPNE1-220ENST00000458038 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.6■□□□□ 0.09
CPNE1-220ENST00000458038 MTFP1Q9UDX5 166 aa15.6■□□□□ 0.09
CPNE1-220ENST00000458038 TBC1D24Q9ULP9 559 aa15.6■□□□□ 0.09
CPNE1-220ENST00000458038 U3KQE9 123 aa15.6■□□□□ 0.09
CPNE1-220ENST00000458038 FAM25AB3EWG3 89 aa15.59■□□□□ 0.09
CPNE1-220ENST00000458038 FAM25CB3EWG5 89 aa15.59■□□□□ 0.09
CPNE1-220ENST00000458038 FAM25GB3EWG6 89 aa15.59■□□□□ 0.09
CPNE1-220ENST00000458038 SLC25A4P12235 298 aa15.59■□□□□ 0.09
CPNE1-220ENST00000458038 YPEL3P61236 119 aaPredicted RBP15.59■□□□□ 0.09
CPNE1-220ENST00000458038 VBP1P61758 197 aa15.59■□□□□ 0.09
CPNE1-220ENST00000458038 NUTF2P61970 127 aaKnown RBP15.59■□□□□ 0.09
CPNE1-220ENST00000458038 NCS1P62166 190 aa15.59■□□□□ 0.09
CPNE1-220ENST00000458038 DHRS2Q13268 280 aa15.59■□□□□ 0.09
CPNE1-220ENST00000458038 MLANAQ16655 118 aa15.59■□□□□ 0.09
CPNE1-220ENST00000458038 ACTL10Q5JWF8 245 aa15.59■□□□□ 0.09
CPNE1-220ENST00000458038 LINC00336Q6ZUF6 198 aa15.59■□□□□ 0.09
CPNE1-220ENST00000458038 OR1S2Q8NGQ3 325 aa15.59■□□□□ 0.09
CPNE1-220ENST00000458038 Q8WTZ3 238 aa15.59■□□□□ 0.09
CPNE1-220ENST00000458038 AP3S1Q92572 193 aa15.59■□□□□ 0.09
CPNE1-220ENST00000458038 C1QTNF4Q9BXJ3 329 aa15.59■□□□□ 0.09
CPNE1-220ENST00000458038 MRPL36Q9P0J6 103 aaKnown RBP15.59■□□□□ 0.09
CPNE1-220ENST00000458038 CACFD1Q9UGQ2 172 aa15.59■□□□□ 0.09
CPNE1-220ENST00000458038 X6R8D5 127 aa15.59■□□□□ 0.09
CPNE1-220ENST00000458038 KNCNA6PVL3 124 aa15.58■□□□□ 0.08
CPNE1-220ENST00000458038 SP6Q3SY56 376 aa15.58■□□□□ 0.08
CPNE1-220ENST00000458038 TIGITQ495A1 244 aa15.58■□□□□ 0.08
CPNE1-220ENST00000458038 CSNK1G2-AS1Q8NCQ2 148 aa15.58■□□□□ 0.08
CPNE1-220ENST00000458038 RNASEH2CQ8TDP1 164 aaKnown RBP15.58■□□□□ 0.08
CPNE1-220ENST00000458038 RAB40CQ96S21 281 aa15.58■□□□□ 0.08
CPNE1-220ENST00000458038 DNAH6Q9C0G6 4158 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms