RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 PITPNC1Q9UKF7 332 aa13.4□□□□□ -0.27
CCDC43-202ENST00000457422 NBASA2RRP1 2371 aa13.39□□□□□ -0.27
CCDC43-202ENST00000457422 ABCA4P78363 2273 aa13.39□□□□□ -0.27
CCDC43-202ENST00000457422 OR7C2O60412 319 aa13.39□□□□□ -0.27
CCDC43-202ENST00000457422 S100A2P29034 98 aa13.39□□□□□ -0.27
CCDC43-202ENST00000457422 RPL27AP46776 148 aaKnown RBP13.39□□□□□ -0.27
CCDC43-202ENST00000457422 SELENOTP62341 195 aa13.39□□□□□ -0.27
CCDC43-202ENST00000457422 ETFRF1Q6IPR1 90 aa13.39□□□□□ -0.27
CCDC43-202ENST00000457422 C11orf71Q6IPW1 123 aa13.39□□□□□ -0.27
CCDC43-202ENST00000457422 TEX38Q6PEX7 206 aa13.39□□□□□ -0.27
CCDC43-202ENST00000457422 NPIPB3Q92617 1050 aa13.39□□□□□ -0.27
CCDC43-202ENST00000457422 FAM167A-AS1Q96KT0 104 aa13.39□□□□□ -0.27
CCDC43-202ENST00000457422 PFDN5Q99471 154 aa13.39□□□□□ -0.27
CCDC43-202ENST00000457422 SIGLEC9Q9Y336 463 aa13.39□□□□□ -0.27
CCDC43-202ENST00000457422 A0A1W2PRE2 83 aa13.38□□□□□ -0.27
CCDC43-202ENST00000457422 LY6LH3BQJ8 138 aa13.38□□□□□ -0.27
CCDC43-202ENST00000457422 IGHV3-48P01763 117 aa13.38□□□□□ -0.27
CCDC43-202ENST00000457422 LIPFP07098 398 aa13.38□□□□□ -0.27
CCDC43-202ENST00000457422 CRYGCP07315 174 aa13.38□□□□□ -0.27
CCDC43-202ENST00000457422 PAX2Q02962 417 aa13.38□□□□□ -0.27
CCDC43-202ENST00000457422 SSX2Q16385 188 aa13.38□□□□□ -0.27
CCDC43-202ENST00000457422 ACTL10Q5JWF8 245 aa13.38□□□□□ -0.27
CCDC43-202ENST00000457422 OR1L4Q8NGR5 311 aa13.38□□□□□ -0.27
CCDC43-202ENST00000457422 NIT2Q9NQR4 276 aa13.38□□□□□ -0.27
CCDC43-202ENST00000457422 ONECUT1Q9UBC0 465 aa13.38□□□□□ -0.27
CCDC43-202ENST00000457422 HNF1AP20823 631 aa13.38□□□□□ -0.27
CCDC43-202ENST00000457422 COMPP49747 757 aaPredicted RBP13.38□□□□□ -0.27
CCDC43-202ENST00000457422 GFI1BQ5VTD9 330 aa13.38□□□□□ -0.27
CCDC43-202ENST00000457422 RNF5Q99942 180 aa13.38□□□□□ -0.27
CCDC43-202ENST00000457422 SLC25A2Q9BXI2 301 aa13.38□□□□□ -0.27
CCDC43-202ENST00000457422 MRPL36Q9P0J6 103 aaKnown RBP13.38□□□□□ -0.27
CCDC43-202ENST00000457422 PLXNB1O43157 2135 aa13.38□□□□□ -0.27
CCDC43-202ENST00000457422 LRBAP50851 2863 aa13.37□□□□□ -0.27
CCDC43-202ENST00000457422 C22orf46C9J442 243 aa13.37□□□□□ -0.27
CCDC43-202ENST00000457422 TNXAQ16473 311 aa13.37□□□□□ -0.27
CCDC43-202ENST00000457422 OR10G8Q8NGN5 311 aa13.37□□□□□ -0.27
CCDC43-202ENST00000457422 RPEQ96AT9 228 aa13.37□□□□□ -0.27
CCDC43-202ENST00000457422 EAF1Q96JC9 268 aaPredicted RBP13.37□□□□□ -0.27
CCDC43-202ENST00000457422 GPR61Q9BZJ8 451 aa13.37□□□□□ -0.27
CCDC43-202ENST00000457422 GGTLC3B5MD39 225 aa13.36□□□□□ -0.27
CCDC43-202ENST00000457422 K7EN84 100 aa13.36□□□□□ -0.27
CCDC43-202ENST00000457422 BPIFB3P59826 476 aa13.36□□□□□ -0.27
CCDC43-202ENST00000457422 COA6Q5JTJ3 125 aaKnown RBP13.36□□□□□ -0.27
CCDC43-202ENST00000457422 PPP1R27Q86WC6 154 aa13.36□□□□□ -0.27
CCDC43-202ENST00000457422 NEU4Q8WWR8 484 aaPredicted RBP13.36□□□□□ -0.27
CCDC43-202ENST00000457422 TIMD4Q96H15 378 aa13.36□□□□□ -0.27
CCDC43-202ENST00000457422 DCHS2Q6V1P9 2916 aa13.36□□□□□ -0.27
CCDC43-202ENST00000457422 COX7A2P2O60397 106 aa13.36□□□□□ -0.27
CCDC43-202ENST00000457422 OR10J4P0C629 311 aa13.36□□□□□ -0.27
CCDC43-202ENST00000457422 MORN5Q5VZ52 161 aa13.36□□□□□ -0.27
CCDC43-202ENST00000457422 HCP5Q6MZN7 132 aa13.36□□□□□ -0.27
CCDC43-202ENST00000457422 OR1P1Q8NH06 330 aa13.36□□□□□ -0.27
CCDC43-202ENST00000457422 SGMS2Q8NHU3 365 aa13.36□□□□□ -0.27
CCDC43-202ENST00000457422 CRYBB3P26998 211 aa13.35□□□□□ -0.27
CCDC43-202ENST00000457422 MFAP2P55001 183 aa13.35□□□□□ -0.27
CCDC43-202ENST00000457422 ZNF90Q03938 601 aa13.35□□□□□ -0.27
CCDC43-202ENST00000457422 C10orf113Q5VZT2 155 aa13.35□□□□□ -0.27
CCDC43-202ENST00000457422 PATE2Q6UY27 113 aa13.35□□□□□ -0.27
CCDC43-202ENST00000457422 C19orf35Q6ZS72 473 aa13.35□□□□□ -0.27
CCDC43-202ENST00000457422 TMEM183AQ8IXX5 376 aa13.35□□□□□ -0.27
CCDC43-202ENST00000457422 OR51M1Q9H341 326 aa13.35□□□□□ -0.27
CCDC43-202ENST00000457422 HRNRQ86YZ3 2850 aaPredicted RBP13.35□□□□□ -0.27
CCDC43-202ENST00000457422 TRAV9-1A0A075B6T8 112 aa13.35□□□□□ -0.27
CCDC43-202ENST00000457422 TRAV5A0A0B4J249 113 aa13.35□□□□□ -0.27
CCDC43-202ENST00000457422 HELTA6NFD8 242 aa13.35□□□□□ -0.27
CCDC43-202ENST00000457422 CORTO00230 105 aa13.35□□□□□ -0.27
CCDC43-202ENST00000457422 APELAP0DMC3 54 aa13.35□□□□□ -0.27
CCDC43-202ENST00000457422 RPL15P61313 204 aaKnown RBP13.35□□□□□ -0.27
CCDC43-202ENST00000457422 PDZD11Q5EBL8 140 aa13.35□□□□□ -0.27
CCDC43-202ENST00000457422 TMEM116Q8NCL8 245 aa13.35□□□□□ -0.27
CCDC43-202ENST00000457422 OR5AU1Q8NGC0 362 aa13.35□□□□□ -0.27
CCDC43-202ENST00000457422 MISP3Q96FF7 219 aa13.35□□□□□ -0.27
CCDC43-202ENST00000457422 TRGV9Q99603 122 aa13.35□□□□□ -0.27
CCDC43-202ENST00000457422 TEX22C9J3V5 150 aa13.34□□□□□ -0.27
CCDC43-202ENST00000457422 UBE2L3P68036 154 aaKnown RBP13.34□□□□□ -0.27
CCDC43-202ENST00000457422 PYY3Q5JQD4 70 aa13.34□□□□□ -0.27
CCDC43-202ENST00000457422 RUSC1-AS1Q66K80 236 aa13.34□□□□□ -0.27
CCDC43-202ENST00000457422 OR11H6Q8NGC7 330 aa13.34□□□□□ -0.27
CCDC43-202ENST00000457422 ZNF355PQ9NSJ1 428 aa13.34□□□□□ -0.27
CCDC43-202ENST00000457422 M0R1W7 72 aa13.33□□□□□ -0.27
CCDC43-202ENST00000457422 GNG4P50150 75 aa13.33□□□□□ -0.27
CCDC43-202ENST00000457422 PDLIM4P50479 330 aa13.33□□□□□ -0.27
CCDC43-202ENST00000457422 LY6DQ14210 128 aa13.33□□□□□ -0.27
CCDC43-202ENST00000457422 CENPWQ5EE01 88 aa13.33□□□□□ -0.27
CCDC43-202ENST00000457422 TPTE2P1Q5T6R2 138 aa13.33□□□□□ -0.27
CCDC43-202ENST00000457422 DTX2Q86UW9 622 aa13.33□□□□□ -0.27
CCDC43-202ENST00000457422 OR10D4PQ8NGN7 298 aa13.33□□□□□ -0.27
CCDC43-202ENST00000457422 C22orf15Q8WYQ4 148 aa13.33□□□□□ -0.27
CCDC43-202ENST00000457422 FBXL15Q9H469 300 aa13.33□□□□□ -0.27
CCDC43-202ENST00000457422 IL36BQ9NZH7 164 aa13.33□□□□□ -0.27
CCDC43-202ENST00000457422 F11RQ9Y624 299 aaKnown RBP13.33□□□□□ -0.27
CCDC43-202ENST00000457422 A0A0U1RQK1 487 aa13.33□□□□□ -0.28
CCDC43-202ENST00000457422 ZNF320A2RRD8 509 aa13.33□□□□□ -0.28
CCDC43-202ENST00000457422 SUMO1P63165 101 aaKnown RBP13.33□□□□□ -0.28
CCDC43-202ENST00000457422 LDLRAD2Q5SZI1 272 aa13.33□□□□□ -0.28
CCDC43-202ENST00000457422 SRSF8Q9BRL6 282 aaKnown RBP13.33□□□□□ -0.28
CCDC43-202ENST00000457422 GSN-AS1Q9NRJ2 163 aa13.33□□□□□ -0.28
CCDC43-202ENST00000457422 TNFRSF19Q9NS68 423 aa13.33□□□□□ -0.28
CCDC43-202ENST00000457422 COL6A6A6NMZ7 2263 aa13.33□□□□□ -0.28
CCDC43-202ENST00000457422 FABP1P07148 127 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms