RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 COMMD5Q9GZQ3 224 aa4.28□□□□□ -1.72
VPS41-209ENST00000457055 RPS10P5Q9NQ39 176 aa4.28□□□□□ -1.72
VPS41-209ENST00000457055 TMEM100Q9NV29 134 aa4.28□□□□□ -1.72
VPS41-209ENST00000457055 ZNF257Q9Y2Q1 563 aa4.28□□□□□ -1.72
VPS41-209ENST00000457055 PXMP4Q9Y6I8 212 aa4.28□□□□□ -1.72
VPS41-209ENST00000457055 PLXNA4Q9HCM2 1894 aa4.28□□□□□ -1.72
VPS41-209ENST00000457055 CHD3Q12873 2000 aaKnown RBP4.28□□□□□ -1.73
VPS41-209ENST00000457055 IGF2RP11717 2491 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 A0A087WZ39 114 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 TCRBV5S1A1TA0A578 114 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 ODAMA1E959 279 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 OR2T8A6NH00 312 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 TMEM262E9PQX1 116 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 WNT9BO14905 357 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 TAX1BP3O14907 124 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 PDCD6O75340 191 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 LYZL6O75951 148 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 EPPINO95925 133 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 HRASP01112 189 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 MT-ND6P03923 174 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 DRD3P35462 400 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 MYCNOSP40205 109 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 CDKN2AP42771 156 aaKnown RBP4.27□□□□□ -1.73
VPS41-209ENST00000457055 HERVK_113P63121 156 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 ZNF85Q03923 595 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 TMEM187Q14656 261 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 TDRG1Q3Y452 100 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 Q6AWC8 147 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 AMTNQ6UX39 209 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 Q6ZN92 141 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 C10orf126Q8N4M7 172 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 LY6G5BQ8NDX9 201 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 OR10J6PQ8NGY7 276 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 OR4K13Q8NH42 304 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 CARD19Q96LW7 228 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 NMNAT3Q96T66 252 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 RTL8AQ9BWD3 113 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 PNRC2Q9NPJ4 139 aaKnown RBP4.27□□□□□ -1.73
VPS41-209ENST00000457055 TMEM106BQ9NUM4 274 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 CLCF1Q9UBD9 225 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 CACNG5Q9UF02 275 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 ZNF222Q9UK12 451 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 FIS1Q9Y3D6 152 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 PLIN4Q96Q06 1357 aa4.27□□□□□ -1.73
VPS41-209ENST00000457055 CROCCQ5TZA2 2017 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 ZNF462Q96JM2 2506 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 DMXL2Q8TDJ6 3036 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 IGHV2-26A0A0B4J1V2 119 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 LY6G6EA0A0G2JKS1 128 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 TEX48A0A1B0GUV7 120 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 HMSDA8MTL9 139 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 FAM220BPB1ANY3 271 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 C8orf87E5RJ46 101 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 LY6LH3BQJ8 138 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 M0R1X1 148 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 RRHO14718 337 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 GSTZ1O43708 216 aaPredicted RBP4.26□□□□□ -1.73
VPS41-209ENST00000457055 ANGPTL7O43827 346 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 PGLYRP1O75594 196 aaPredicted RBP4.26□□□□□ -1.73
VPS41-209ENST00000457055 APOMO95445 188 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 EIF4EP06730 217 aaKnown RBP4.26□□□□□ -1.73
VPS41-209ENST00000457055 ADCYAP1P18509 176 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 CCL1P22362 96 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 GADD45AP24522 165 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 FKBP2P26885 142 aaKnown RBP4.26□□□□□ -1.73
VPS41-209ENST00000457055 PSMB8P28062 276 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 PRSS3P35030 304 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 RND2P52198 227 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 SEC61BP60468 96 aaKnown RBP4.26□□□□□ -1.73
VPS41-209ENST00000457055 HERV-K104P61576 105 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 PAX8Q06710 450 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 MSMO1Q15800 293 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 ADIRFQ15847 76 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 RTL8BQ17RB0 113 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 CENPWQ5EE01 88 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 PAGE3Q5JUK9 113 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 SPANXN4Q5MJ08 99 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 SLC25A30Q5SVS4 291 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 C10orf25Q5T742 122 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 AADACL3Q5VUY0 350 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 LCN8Q6JVE9 175 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 ZNF493Q6ZR52 646 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 LHFPL1Q86WI0 220 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 NR2C2APQ86WQ0 139 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 C9orf40Q8IXQ3 194 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 SAXO1Q8IYX7 474 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 ZFP41Q8N8Y5 198 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 ATP6V0E2Q8NHE4 81 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 SGMS2Q8NHU3 365 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 FGF14Q92915 247 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 POP5Q969H6 163 aaKnown RBP4.26□□□□□ -1.73
VPS41-209ENST00000457055 RAB37Q96AX2 223 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 IGF2BP2-AS1Q96M15 143 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 TSSK6Q9BXA6 273 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 MTFP1Q9UDX5 166 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 MARCOQ9UEW3 520 aaPredicted RBP4.26□□□□□ -1.73
VPS41-209ENST00000457055 PCTPQ9UKL6 214 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 PYGO1Q9Y3Y4 419 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 LINC00312Q9Y6C7 94 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 MIA3Q5JRA6 1907 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms