RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 SCGB2A1O75556 95 aa12.14□□□□□ -0.47
CPSF6-203ENST00000456847 HTR2BP41595 481 aa12.14□□□□□ -0.47
CPSF6-203ENST00000456847 INPP1P49441 399 aa12.14□□□□□ -0.47
CPSF6-203ENST00000456847 SRPXP78539 464 aa12.14□□□□□ -0.47
CPSF6-203ENST00000456847 AARDQ4LEZ3 155 aa12.14□□□□□ -0.47
CPSF6-203ENST00000456847 TMEM116Q8NCL8 245 aa12.14□□□□□ -0.47
CPSF6-203ENST00000456847 SMPXQ9UHP9 88 aa12.14□□□□□ -0.47
CPSF6-203ENST00000456847 LINC00322Q6ZN03 302 aaPredicted RBP12.13□□□□□ -0.47
CPSF6-203ENST00000456847 ZNF600Q6ZNG1 722 aa12.13□□□□□ -0.47
CPSF6-203ENST00000456847 LGI3Q8N145 548 aa12.13□□□□□ -0.47
CPSF6-203ENST00000456847 CITED4Q96RK1 184 aa12.13□□□□□ -0.47
CPSF6-203ENST00000456847 RHPN1-AS1Q9BWJ2 59 aa12.13□□□□□ -0.47
CPSF6-203ENST00000456847 UBQLN2Q9UHD9 624 aa12.13□□□□□ -0.47
CPSF6-203ENST00000456847 TRAV14DV4A0A0A6YYC5 116 aa12.13□□□□□ -0.47
CPSF6-203ENST00000456847 RPS10-NUDT3A0A1W2PQS6 291 aa12.13□□□□□ -0.47
CPSF6-203ENST00000456847 OR4C46A6NHA9 309 aa12.13□□□□□ -0.47
CPSF6-203ENST00000456847 SUPT4H1P63272 117 aaKnown RBP12.13□□□□□ -0.47
CPSF6-203ENST00000456847 PVRIGQ6DKI7 326 aa12.13□□□□□ -0.47
CPSF6-203ENST00000456847 SLC24A4Q8NFF2 622 aa12.13□□□□□ -0.47
CPSF6-203ENST00000456847 ZNF414Q96IQ9 312 aa12.13□□□□□ -0.47
CPSF6-203ENST00000456847 OR10C1Q96KK4 312 aa12.13□□□□□ -0.47
CPSF6-203ENST00000456847 FAM110AQ9BQ89 295 aa12.13□□□□□ -0.47
CPSF6-203ENST00000456847 HIPK2Q9H2X6 1198 aa12.13□□□□□ -0.47
CPSF6-203ENST00000456847 CACFD1Q9UGQ2 172 aa12.13□□□□□ -0.47
CPSF6-203ENST00000456847 A0A0B4J2A0 478 aa12.12□□□□□ -0.47
CPSF6-203ENST00000456847 CHEK1O14757 476 aa12.12□□□□□ -0.47
CPSF6-203ENST00000456847 TMEM50AO95807 157 aa12.12□□□□□ -0.47
CPSF6-203ENST00000456847 BMI1P35226 326 aa12.12□□□□□ -0.47
CPSF6-203ENST00000456847 BSXQ3C1V8 233 aa12.12□□□□□ -0.47
CPSF6-203ENST00000456847 TOMM20LQ6UXN7 152 aa12.12□□□□□ -0.47
CPSF6-203ENST00000456847 LYZL2Q7Z4W2 148 aa12.12□□□□□ -0.47
CPSF6-203ENST00000456847 GGTLC1Q9BX51 225 aa12.12□□□□□ -0.47
CPSF6-203ENST00000456847 FNDC4Q9H6D8 234 aaPredicted RBP12.12□□□□□ -0.47
CPSF6-203ENST00000456847 SHPKQ9UHJ6 478 aa12.12□□□□□ -0.47
CPSF6-203ENST00000456847 PUS1Q9Y606 427 aaKnown RBP eCLIP12.12□□□□□ -0.47
CPSF6-203ENST00000456847 IGHV3OR16-13A0A075B7E8 117 aa12.11□□□□□ -0.47
CPSF6-203ENST00000456847 IGHV3-74A0A0B4J1X5 117 aa12.11□□□□□ -0.47
CPSF6-203ENST00000456847 PIGBOS1A0A0B4J2F0 54 aa12.11□□□□□ -0.47
CPSF6-203ENST00000456847 VAMP1P23763 118 aa12.11□□□□□ -0.47
CPSF6-203ENST00000456847 CCR6P51684 374 aa12.11□□□□□ -0.47
CPSF6-203ENST00000456847 SMCO1Q147U7 214 aa12.11□□□□□ -0.47
CPSF6-203ENST00000456847 TRIQKQ629K1 86 aa12.11□□□□□ -0.47
CPSF6-203ENST00000456847 DEDD2Q8WXF8 326 aa12.11□□□□□ -0.47
CPSF6-203ENST00000456847 RNF2Q99496 336 aa12.11□□□□□ -0.47
CPSF6-203ENST00000456847 IGKV3-7A0A075B6H7 116 aa12.11□□□□□ -0.47
CPSF6-203ENST00000456847 LOC102724200A0A096LPH7 203 aaPredicted RBP12.11□□□□□ -0.47
CPSF6-203ENST00000456847 CLN5O75503 358 aa12.11□□□□□ -0.47
CPSF6-203ENST00000456847 MLANAQ16655 118 aa12.11□□□□□ -0.47
CPSF6-203ENST00000456847 C2orf83Q53S99 150 aa12.11□□□□□ -0.47
CPSF6-203ENST00000456847 OR1S1Q8NH92 325 aa12.11□□□□□ -0.47
CPSF6-203ENST00000456847 SLC25A21Q9BQT8 299 aaPredicted RBP12.11□□□□□ -0.47
CPSF6-203ENST00000456847 SRRQ9GZT4 340 aa12.11□□□□□ -0.47
CPSF6-203ENST00000456847 MRPL36Q9P0J6 103 aaKnown RBP12.11□□□□□ -0.47
CPSF6-203ENST00000456847 LYL1P12980 280 aa12.1□□□□□ -0.47
CPSF6-203ENST00000456847 NPY1RP25929 384 aa12.1□□□□□ -0.47
CPSF6-203ENST00000456847 TFPI2P48307 235 aa12.1□□□□□ -0.47
CPSF6-203ENST00000456847 TMEM128Q5BJH2 165 aa12.1□□□□□ -0.47
CPSF6-203ENST00000456847 NMSQ5H8A3 153 aa12.1□□□□□ -0.47
CPSF6-203ENST00000456847 OR4X1Q8NH49 305 aa12.1□□□□□ -0.47
CPSF6-203ENST00000456847 STAB2Q8WWQ8 2551 aa12.09□□□□□ -0.47
CPSF6-203ENST00000456847 TNFRSF9Q07011 255 aa12.09□□□□□ -0.47
CPSF6-203ENST00000456847 NOXA1Q86UR1 476 aa12.09□□□□□ -0.47
CPSF6-203ENST00000456847 RNASEH2CQ8TDP1 164 aaKnown RBP12.09□□□□□ -0.47
CPSF6-203ENST00000456847 ZFAND3Q9H8U3 227 aa12.09□□□□□ -0.47
CPSF6-203ENST00000456847 TRAV30A0A087WSZ9 112 aa12.09□□□□□ -0.47
CPSF6-203ENST00000456847 DUXBA0A1W2PPF3 345 aa12.09□□□□□ -0.47
CPSF6-203ENST00000456847 IFNA10P01566 189 aa12.09□□□□□ -0.47
CPSF6-203ENST00000456847 TCF24Q7RTU0 167 aa12.09□□□□□ -0.47
CPSF6-203ENST00000456847 CENPSQ8N2Z9 138 aa12.09□□□□□ -0.47
CPSF6-203ENST00000456847 DTD1Q8TEA8 209 aa12.09□□□□□ -0.47
CPSF6-203ENST00000456847 RBKSQ9H477 322 aa12.09□□□□□ -0.47
CPSF6-203ENST00000456847 TMEM231Q9H6L2 316 aa12.09□□□□□ -0.47
CPSF6-203ENST00000456847 EDA2RQ9HAV5 297 aa12.09□□□□□ -0.47
CPSF6-203ENST00000456847 IGHV3-66A0A0C4DH42 116 aa12.08□□□□□ -0.48
CPSF6-203ENST00000456847 A0A1B0GU03 582 aa12.08□□□□□ -0.48
CPSF6-203ENST00000456847 SLC25A4P12235 298 aa12.08□□□□□ -0.48
CPSF6-203ENST00000456847 RND2P52198 227 aa12.08□□□□□ -0.48
CPSF6-203ENST00000456847 RBMS2Q15434 407 aaKnown RBP12.08□□□□□ -0.48
CPSF6-203ENST00000456847 ODF3L2Q3SX64 289 aa12.08□□□□□ -0.48
CPSF6-203ENST00000456847 TIGITQ495A1 244 aa12.08□□□□□ -0.48
CPSF6-203ENST00000456847 ETFRF1Q6IPR1 90 aa12.08□□□□□ -0.48
CPSF6-203ENST00000456847 ST8SIA2Q92186 375 aa12.08□□□□□ -0.48
CPSF6-203ENST00000456847 HSPB7Q9UBY9 170 aa12.08□□□□□ -0.48
CPSF6-203ENST00000456847 TENM3Q9P273 2699 aa12.08□□□□□ -0.48
CPSF6-203ENST00000456847 PAFAH1B2P68402 229 aa12.07□□□□□ -0.48
CPSF6-203ENST00000456847 CASC10Q5T4H9 136 aa12.07□□□□□ -0.48
CPSF6-203ENST00000456847 ZFAND6Q6FIF0 208 aa12.07□□□□□ -0.48
CPSF6-203ENST00000456847 GBGT1Q8N5D6 347 aa12.07□□□□□ -0.48
CPSF6-203ENST00000456847 OR1S2Q8NGQ3 325 aa12.07□□□□□ -0.48
CPSF6-203ENST00000456847 METTL26Q96S19 204 aa12.07□□□□□ -0.48
CPSF6-203ENST00000456847 LINC00854A0A1B0GVQ3 168 aa12.07□□□□□ -0.48
CPSF6-203ENST00000456847 SFT2D2O95562 160 aa12.07□□□□□ -0.48
CPSF6-203ENST00000456847 APOHP02749 345 aaPredicted RBP12.07□□□□□ -0.48
CPSF6-203ENST00000456847 APOC4P55056 127 aa12.07□□□□□ -0.48
CPSF6-203ENST00000456847 RPL11P62913 178 aaKnown RBP12.07□□□□□ -0.48
CPSF6-203ENST00000456847 PPP1R1AQ13522 171 aa12.07□□□□□ -0.48
CPSF6-203ENST00000456847 NARS2Q96I59 477 aaKnown RBP12.07□□□□□ -0.48
CPSF6-203ENST00000456847 NAP1L6A6NFF2 107 aa12.06□□□□□ -0.48
CPSF6-203ENST00000456847 CD5P06127 495 aa12.06□□□□□ -0.48
CPSF6-203ENST00000456847 NPPCP23582 126 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms