RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 PPP5CP53041 499 aa12.13□□□□□ -0.47
TVP23A-202ENST00000456096 MLANAQ16655 118 aa12.13□□□□□ -0.47
TVP23A-202ENST00000456096 KCTD21Q4G0X4 260 aa12.13□□□□□ -0.47
TVP23A-202ENST00000456096 SNX29P2Q8IUI4 249 aa12.13□□□□□ -0.47
TVP23A-202ENST00000456096 YIPF6Q96EC8 236 aa12.13□□□□□ -0.47
TVP23A-202ENST00000456096 COMMD3Q9UBI1 195 aa12.13□□□□□ -0.47
TVP23A-202ENST00000456096 DYNC1H1Q14204 4646 aaKnown RBP12.13□□□□□ -0.47
TVP23A-202ENST00000456096 SMIM31A0A1B0GVY4 71 aa12.12□□□□□ -0.47
TVP23A-202ENST00000456096 ZNF705EA8MWA4 302 aaPredicted RBP12.12□□□□□ -0.47
TVP23A-202ENST00000456096 M0QYG6 137 aa12.12□□□□□ -0.47
TVP23A-202ENST00000456096 CLN5O75503 358 aa12.12□□□□□ -0.47
TVP23A-202ENST00000456096 ZNF688P0C7X2 276 aa12.12□□□□□ -0.47
TVP23A-202ENST00000456096 P0C879 139 aa12.12□□□□□ -0.47
TVP23A-202ENST00000456096 RNASE2P10153 161 aaKnown RBP12.12□□□□□ -0.47
TVP23A-202ENST00000456096 MIFP14174 115 aa12.12□□□□□ -0.47
TVP23A-202ENST00000456096 CRYBB3P26998 211 aa12.12□□□□□ -0.47
TVP23A-202ENST00000456096 RCVRNP35243 200 aa12.12□□□□□ -0.47
TVP23A-202ENST00000456096 P2RY1P47900 373 aa12.12□□□□□ -0.47
TVP23A-202ENST00000456096 SUB1P53999 127 aaKnown RBP eCLIP12.12□□□□□ -0.47
TVP23A-202ENST00000456096 TMEM41BQ5BJD5 291 aa12.12□□□□□ -0.47
TVP23A-202ENST00000456096 MORN3Q6PF18 240 aaPredicted RBP12.12□□□□□ -0.47
TVP23A-202ENST00000456096 Q6ZTC4 211 aa12.12□□□□□ -0.47
TVP23A-202ENST00000456096 GRAMD2BQ96HH9 432 aa12.12□□□□□ -0.47
TVP23A-202ENST00000456096 METTL26Q96S19 204 aa12.12□□□□□ -0.47
TVP23A-202ENST00000456096 FNDC4Q9H6D8 234 aaPredicted RBP12.12□□□□□ -0.47
TVP23A-202ENST00000456096 X6R8D5 127 aa12.12□□□□□ -0.47
TVP23A-202ENST00000456096 ELOA3CA0A087WX78 387 aaPredicted RBP12.11□□□□□ -0.47
TVP23A-202ENST00000456096 TRAV10A0A0B4J240 114 aa12.11□□□□□ -0.47
TVP23A-202ENST00000456096 CORTO00230 105 aa12.11□□□□□ -0.47
TVP23A-202ENST00000456096 APOA1P02647 267 aa12.11□□□□□ -0.47
TVP23A-202ENST00000456096 SPP1P10451 314 aa12.11□□□□□ -0.47
TVP23A-202ENST00000456096 PGAM2P15259 253 aa12.11□□□□□ -0.47
TVP23A-202ENST00000456096 AKR1C2P52895 323 aa12.11□□□□□ -0.47
TVP23A-202ENST00000456096 RND3P61587 244 aa12.11□□□□□ -0.47
TVP23A-202ENST00000456096 TMEM230Q96A57 120 aa12.11□□□□□ -0.47
TVP23A-202ENST00000456096 TP53RKQ96S44 253 aa12.11□□□□□ -0.47
TVP23A-202ENST00000456096 CLEC5AQ9NY25 188 aa12.11□□□□□ -0.47
TVP23A-202ENST00000456096 IGHV4-4A0A075B6R2 117 aa12.1□□□□□ -0.47
TVP23A-202ENST00000456096 OPRK1P41145 380 aa12.1□□□□□ -0.47
TVP23A-202ENST00000456096 HOXA1P49639 335 aaPredicted RBP12.1□□□□□ -0.47
TVP23A-202ENST00000456096 PIGPP57054 158 aa12.1□□□□□ -0.47
TVP23A-202ENST00000456096 ACTL10Q5JWF8 245 aa12.1□□□□□ -0.47
TVP23A-202ENST00000456096 OR4X1Q8NH49 305 aa12.1□□□□□ -0.47
TVP23A-202ENST00000456096 DCANP1Q8TF63 244 aa12.1□□□□□ -0.47
TVP23A-202ENST00000456096 ZNF486Q96H40 463 aaPredicted RBP12.1□□□□□ -0.47
TVP23A-202ENST00000456096 PDCD10Q9BUL8 212 aa12.1□□□□□ -0.47
TVP23A-202ENST00000456096 IGKV1-17P01599 117 aa12.09□□□□□ -0.47
TVP23A-202ENST00000456096 ELK1P19419 428 aa12.09□□□□□ -0.47
TVP23A-202ENST00000456096 TIGITQ495A1 244 aa12.09□□□□□ -0.47
TVP23A-202ENST00000456096 CENPSQ8N2Z9 138 aa12.09□□□□□ -0.47
TVP23A-202ENST00000456096 CSNK1G2-AS1Q8NCQ2 148 aa12.09□□□□□ -0.47
TVP23A-202ENST00000456096 TBC1D24Q9ULP9 559 aa12.09□□□□□ -0.47
TVP23A-202ENST00000456096 DNAH11Q96DT5 4516 aa12.09□□□□□ -0.47
TVP23A-202ENST00000456096 C3orf85A0A1B0GTC6 90 aa12.08□□□□□ -0.48
TVP23A-202ENST00000456096 ATG12O94817 140 aa12.08□□□□□ -0.48
TVP23A-202ENST00000456096 RPL5P46777 297 aaKnown RBP12.08□□□□□ -0.48
TVP23A-202ENST00000456096 SP6Q3SY56 376 aa12.08□□□□□ -0.48
TVP23A-202ENST00000456096 RNASE12Q5GAN4 147 aaKnown RBP12.08□□□□□ -0.48
TVP23A-202ENST00000456096 LHFPL1Q86WI0 220 aa12.08□□□□□ -0.48
TVP23A-202ENST00000456096 NARS2Q96I59 477 aaKnown RBP12.08□□□□□ -0.48
TVP23A-202ENST00000456096 ENY2Q9NPA8 101 aa12.08□□□□□ -0.48
TVP23A-202ENST00000456096 CELA1Q9UNI1 258 aa12.08□□□□□ -0.48
TVP23A-202ENST00000456096 A0A0G2JRQ6 117 aa12.07□□□□□ -0.48
TVP23A-202ENST00000456096 HPGDSO60760 199 aa12.07□□□□□ -0.48
TVP23A-202ENST00000456096 NCS1P62166 190 aa12.07□□□□□ -0.48
TVP23A-202ENST00000456096 DHRS2Q13268 280 aa12.07□□□□□ -0.48
TVP23A-202ENST00000456096 TRIM16LQ309B1 348 aa12.07□□□□□ -0.48
TVP23A-202ENST00000456096 BSXQ3C1V8 233 aa12.07□□□□□ -0.48
TVP23A-202ENST00000456096 Q6ZRM9 215 aa12.07□□□□□ -0.48
TVP23A-202ENST00000456096 LINC00336Q6ZUF6 198 aa12.07□□□□□ -0.48
TVP23A-202ENST00000456096 ZNF767PQ75MW2 155 aa12.07□□□□□ -0.48
TVP23A-202ENST00000456096 RAB40CQ96S21 281 aa12.07□□□□□ -0.48
TVP23A-202ENST00000456096 RNF126Q9BV68 326 aa12.07□□□□□ -0.48
TVP23A-202ENST00000456096 KLK11Q9UBX7 282 aa12.07□□□□□ -0.48
TVP23A-202ENST00000456096 U3KQE9 123 aa12.07□□□□□ -0.48
TVP23A-202ENST00000456096 TRAV30A0A087WSZ9 112 aa12.06□□□□□ -0.48
TVP23A-202ENST00000456096 SCGB2A1O75556 95 aa12.06□□□□□ -0.48
TVP23A-202ENST00000456096 CD3DP04234 171 aa12.06□□□□□ -0.48
TVP23A-202ENST00000456096 C12orf74Q32Q52 190 aa12.06□□□□□ -0.48
TVP23A-202ENST00000456096 RNASE10Q5GAN6 216 aaKnown RBP12.06□□□□□ -0.48
TVP23A-202ENST00000456096 PSMG4Q5JS54 123 aa12.06□□□□□ -0.48
TVP23A-202ENST00000456096 RRNAD1Q96FB5 475 aaKnown RBP12.06□□□□□ -0.48
TVP23A-202ENST00000456096 DEFB131BA0A096LNP1 70 aa12.05□□□□□ -0.48
TVP23A-202ENST00000456096 HELTA6NFD8 242 aa12.05□□□□□ -0.48
TVP23A-202ENST00000456096 EIF2B2P49770 351 aaKnown RBP12.05□□□□□ -0.48
TVP23A-202ENST00000456096 C16orf54Q6UWD8 224 aa12.05□□□□□ -0.48
TVP23A-202ENST00000456096 ARRDC1Q8N5I2 433 aa12.05□□□□□ -0.48
TVP23A-202ENST00000456096 OR52I2Q8NH67 350 aa12.05□□□□□ -0.48
TVP23A-202ENST00000456096 RNASE11Q8TAA1 199 aaKnown RBP12.05□□□□□ -0.48
TVP23A-202ENST00000456096 GLMPQ8WWB7 406 aa12.05□□□□□ -0.48
TVP23A-202ENST00000456096 SCRT1Q9BWW7 348 aa12.05□□□□□ -0.48
TVP23A-202ENST00000456096 VCX3AQ9NNX9 186 aa12.05□□□□□ -0.48
TVP23A-202ENST00000456096 COPZ2Q9P299 210 aa12.05□□□□□ -0.48
TVP23A-202ENST00000456096 A0A087WXM4 84 aa12.04□□□□□ -0.48
TVP23A-202ENST00000456096 A0A1B0GVY2 172 aa12.04□□□□□ -0.48
TVP23A-202ENST00000456096 HNRNPCP07910 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
TVP23A-202ENST00000456096 IGLC1P0CG04 106 aa12.04□□□□□ -0.48
TVP23A-202ENST00000456096 UCP1P25874 307 aa12.04□□□□□ -0.48
TVP23A-202ENST00000456096 SPCS3P61009 180 aa12.04□□□□□ -0.48
TVP23A-202ENST00000456096 VBP1P61758 197 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms