RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 PATE2Q6UY27 113 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 MAPK1IP1LQ8NDC0 245 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 OR13D1Q8NGV5 346 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 CCDC140Q96MF4 163 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 TMEM147Q9BVK8 224 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 TMEM231Q9H6L2 316 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 WASHC3Q9Y3C0 194 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 PKHD1L1Q86WI1 4243 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 H7C2Y5 167 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 MPDU1O75352 247 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 CRLF1O75462 422 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 CST7O76096 145 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 IGHG4P01861 327 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 OR13C7P0DN81 318 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 BCL2P10415 239 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 BTN1A1Q13410 526 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 CLINT1Q14677 625 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 C5orf64Q2M2E5 130 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 ZNF562Q6V9R5 426 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 VKORC1L1Q8N0U8 176 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 OR4C13Q8NGP0 309 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 SGMS2Q8NHU3 365 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 TIMD4Q96H15 378 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 C1RLQ9NZP8 487 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 FASNP49327 2511 aaKnown RBP3.83□□□□□ -1.8
RIF1-207ENST00000454583 WI2-2373I1.2A0A1W2PRP0 233 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 MOSP00540 346 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 CXCL1P09341 107 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 OR10J4P0C629 311 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 RAB14P61106 215 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 SLC38A11Q08AI6 406 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 KRTAP21-3Q3LHN1 58 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 GPHB5Q86YW7 130 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 SLC25A2Q9BXI2 301 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 SIRT7Q9NRC8 400 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 FBN3Q75N90 2809 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 TRBV24-1A0A075B6N3 115 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 A8MTW9 85 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 FBP1P09467 338 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 METTL15P1P0C7V9 234 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 NQO2P16083 231 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 CD33P20138 364 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 MC5RP33032 325 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 LGALS7P47929 136 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 AKR1C2P52895 323 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 EDDM3BP56851 147 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 PROK1P58294 105 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 LINC00310P59036 64 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 AKR1C1Q04828 323 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 AWAT1Q58HT5 328 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 TMEM116Q8NCL8 245 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 GATAD1Q8WUU5 269 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 LHX4Q969G2 390 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 CLCC1Q96S66 551 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 SMIM3Q9BZL3 60 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 RNF150Q9ULK6 438 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 LY96Q9Y6Y9 160 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 SACSQ9NZJ4 4579 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 TRBV6-1A0A0K0K1D8 114 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 C7orf77A4D0Y5 90 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 TMEM250H0YL14 139 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 K7EN84 100 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 NDUFB7P17568 137 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 HTR1DP28221 377 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 HSPE1P61604 102 aaKnown RBP3.82□□□□□ -1.8
RIF1-207ENST00000454583 AKIRIN2Q53H80 203 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 MORN5Q5VZ52 161 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 C19orf35Q6ZS72 473 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 GATD1Q8NB37 220 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 SPATA3Q8NHX4 192 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 C2CD4CQ8TF44 421 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 WFDC12Q8WWY7 111 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 TMEM37Q8WXS4 190 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 PKDREJQ9NTG1 2253 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 HECTD1Q9ULT8 2610 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 TRAV40A0A0B4J280 105 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 DNAJC9-AS1A6NH13 148 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 H3BUA1 57 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 SOCS3O14543 225 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 NBR2O15453 112 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 SERPINE2P07093 398 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 C8orf88P0DMB2 117 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 GPX4P36969 197 aaPredicted RBP3.82□□□□□ -1.8
RIF1-207ENST00000454583 GPR12P47775 334 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 GNG10P50151 68 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 GNB1P62873 340 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 CTAG1AP78358 180 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 GAMTQ14353 236 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 CYP2G1PQ6ZSU1 146 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 OR5B3Q8NH48 314 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 OR4S2Q8NH73 311 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 PINX1Q96BK5 328 aaKnown RBP3.82□□□□□ -1.8
RIF1-207ENST00000454583 CIB3Q96Q77 187 aaPredicted RBP3.82□□□□□ -1.8
RIF1-207ENST00000454583 IMMP2LQ96T52 175 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 HRH4Q9H3N8 390 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 TECRQ9NZ01 308 aaKnown RBP3.82□□□□□ -1.8
RIF1-207ENST00000454583 VPREB3Q9UKI3 123 aa3.82□□□□□ -1.8
RIF1-207ENST00000454583 YTHDF2Q9Y5A9 579 aaKnown RBP3.82□□□□□ -1.8
RIF1-207ENST00000454583 BORCS7-ASMTA0A0B4J1R7 106 aa3.81□□□□□ -1.8
RIF1-207ENST00000454583 CTXND1A0A1B0GTU2 59 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms