RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 COQ8AQ8NI60 647 aa10.71□□□□□ -0.69
HDAC4-205ENST00000454542 MARC2Q969Z3 335 aa10.71□□□□□ -0.69
HDAC4-205ENST00000454542 PALMDQ9NP74 551 aa10.71□□□□□ -0.69
HDAC4-205ENST00000454542 NUDT15Q9NV35 164 aa10.71□□□□□ -0.69
HDAC4-205ENST00000454542 TECRQ9NZ01 308 aaKnown RBP10.71□□□□□ -0.69
HDAC4-205ENST00000454542 UFC1Q9Y3C8 167 aa10.71□□□□□ -0.69
HDAC4-205ENST00000454542 TGP01266 2768 aa10.7□□□□□ -0.7
HDAC4-205ENST00000454542 IGHV3-35A0A0C4DH35 117 aa10.7□□□□□ -0.7
HDAC4-205ENST00000454542 IZUMO1RA6ND01 250 aa10.7□□□□□ -0.7
HDAC4-205ENST00000454542 NUPL2O15504 423 aaKnown RBP10.7□□□□□ -0.7
HDAC4-205ENST00000454542 ADAP1O75689 374 aa10.7□□□□□ -0.7
HDAC4-205ENST00000454542 LY86O95711 162 aa10.7□□□□□ -0.7
HDAC4-205ENST00000454542 IGHV3-48P01763 117 aa10.7□□□□□ -0.7
HDAC4-205ENST00000454542 HOXB5P09067 269 aa10.7□□□□□ -0.7
HDAC4-205ENST00000454542 CBLN1P23435 193 aa10.7□□□□□ -0.7
HDAC4-205ENST00000454542 OPRK1P41145 380 aa10.7□□□□□ -0.7
HDAC4-205ENST00000454542 NPBWR1P48145 328 aa10.7□□□□□ -0.7
HDAC4-205ENST00000454542 ATP5IP56385 69 aaPredicted RBP10.7□□□□□ -0.7
HDAC4-205ENST00000454542 RELQ04864 619 aaPredicted RBP10.7□□□□□ -0.7
HDAC4-205ENST00000454542 CD300EQ496F6 205 aaPredicted RBP10.7□□□□□ -0.7
HDAC4-205ENST00000454542 C4orf46Q504U0 113 aa10.7□□□□□ -0.7
HDAC4-205ENST00000454542 TM4SF20Q53R12 229 aa10.7□□□□□ -0.7
HDAC4-205ENST00000454542 DUSP18Q8NEJ0 188 aa10.7□□□□□ -0.7
HDAC4-205ENST00000454542 OR52B4Q8NGK2 314 aa10.7□□□□□ -0.7
HDAC4-205ENST00000454542 OR4X1Q8NH49 305 aa10.7□□□□□ -0.7
HDAC4-205ENST00000454542 OR10C1Q96KK4 312 aa10.7□□□□□ -0.7
HDAC4-205ENST00000454542 HIPK2Q9H2X6 1198 aa10.7□□□□□ -0.7
HDAC4-205ENST00000454542 DAZ1Q9NQZ3 744 aaKnown RBP10.7□□□□□ -0.7
HDAC4-205ENST00000454542 MLXQ9UH92 298 aa10.7□□□□□ -0.7
HDAC4-205ENST00000454542 U3KQ87 197 aa10.7□□□□□ -0.7
HDAC4-205ENST00000454542 RPS10-NUDT3A0A1W2PQS6 291 aa10.69□□□□□ -0.7
HDAC4-205ENST00000454542 C15orf62A8K5M9 175 aa10.69□□□□□ -0.7
HDAC4-205ENST00000454542 MPTX1A8MV57 137 aa10.69□□□□□ -0.7
HDAC4-205ENST00000454542 K7EMT4 169 aa10.69□□□□□ -0.7
HDAC4-205ENST00000454542 GNG7O60262 68 aa10.69□□□□□ -0.7
HDAC4-205ENST00000454542 CLN5O75503 358 aa10.69□□□□□ -0.7
HDAC4-205ENST00000454542 NOXA1Q86UR1 476 aa10.69□□□□□ -0.7
HDAC4-205ENST00000454542 Q8N1Y9 231 aa10.69□□□□□ -0.7
HDAC4-205ENST00000454542 OR4D5Q8NGN0 318 aa10.69□□□□□ -0.7
HDAC4-205ENST00000454542 DYNLRB2Q8TF09 96 aa10.69□□□□□ -0.7
HDAC4-205ENST00000454542 B9D2Q9BPU9 175 aa10.69□□□□□ -0.7
HDAC4-205ENST00000454542 ZFAND3Q9H8U3 227 aa10.69□□□□□ -0.7
HDAC4-205ENST00000454542 MRPL27Q9P0M9 148 aaKnown RBP10.69□□□□□ -0.7
HDAC4-205ENST00000454542 HUWE1Q7Z6Z7 4374 aaKnown RBP10.68□□□□□ -0.7
HDAC4-205ENST00000454542 TRAV6A0A075B6T7 132 aa10.68□□□□□ -0.7
HDAC4-205ENST00000454542 FAM240BA0A1B0GVZ2 78 aa10.68□□□□□ -0.7
HDAC4-205ENST00000454542 ZNF320A2RRD8 509 aa10.68□□□□□ -0.7
HDAC4-205ENST00000454542 TMEM50AO95807 157 aa10.68□□□□□ -0.7
HDAC4-205ENST00000454542 SLC25A4P12235 298 aa10.68□□□□□ -0.7
HDAC4-205ENST00000454542 MZT2BQ6NZ67 158 aa10.68□□□□□ -0.7
HDAC4-205ENST00000454542 PRSS54Q6PEW0 395 aa10.68□□□□□ -0.7
HDAC4-205ENST00000454542 UXS1Q8NBZ7 420 aa10.68□□□□□ -0.7
HDAC4-205ENST00000454542 TMEM116Q8NCL8 245 aa10.68□□□□□ -0.7
HDAC4-205ENST00000454542 ZNF785A8K8V0 405 aa10.67□□□□□ -0.7
HDAC4-205ENST00000454542 A8MZ25 164 aa10.67□□□□□ -0.7
HDAC4-205ENST00000454542 MED6O75586 246 aa10.67□□□□□ -0.7
HDAC4-205ENST00000454542 IGKV1-17P01599 117 aa10.67□□□□□ -0.7
HDAC4-205ENST00000454542 H2AFB2P0C5Z0 115 aa10.67□□□□□ -0.7
HDAC4-205ENST00000454542 IGLC1P0CG04 106 aa10.67□□□□□ -0.7
HDAC4-205ENST00000454542 ID3Q02535 119 aa10.67□□□□□ -0.7
HDAC4-205ENST00000454542 CD69Q07108 199 aa10.67□□□□□ -0.7
HDAC4-205ENST00000454542 MLANAQ16655 118 aa10.67□□□□□ -0.7
HDAC4-205ENST00000454542 BTNL8Q6UX41 500 aa10.67□□□□□ -0.7
HDAC4-205ENST00000454542 ZNF600Q6ZNG1 722 aa10.67□□□□□ -0.7
HDAC4-205ENST00000454542 TMEM61Q8N0U2 210 aa10.67□□□□□ -0.7
HDAC4-205ENST00000454542 ZNF431Q8TF32 576 aaPredicted RBP10.67□□□□□ -0.7
HDAC4-205ENST00000454542 CIB3Q96Q77 187 aaPredicted RBP10.67□□□□□ -0.7
HDAC4-205ENST00000454542 SMAD5-AS1Q9Y6J3 95 aa10.67□□□□□ -0.7
HDAC4-205ENST00000454542 TRAV25A0A0B4J276 109 aa10.66□□□□□ -0.7
HDAC4-205ENST00000454542 PRSS46E5RG02 174 aa10.66□□□□□ -0.7
HDAC4-205ENST00000454542 SYNGR2O43760 224 aa10.66□□□□□ -0.7
HDAC4-205ENST00000454542 SCAF4O95104 1147 aaKnown RBP10.66□□□□□ -0.7
HDAC4-205ENST00000454542 IFNA10P01566 189 aa10.66□□□□□ -0.7
HDAC4-205ENST00000454542 IAPPP10997 89 aa10.66□□□□□ -0.7
HDAC4-205ENST00000454542 TOMM20LQ6UXN7 152 aa10.66□□□□□ -0.7
HDAC4-205ENST00000454542 SLC16A13Q7RTY0 426 aa10.66□□□□□ -0.7
HDAC4-205ENST00000454542 OR1S2Q8NGQ3 325 aa10.66□□□□□ -0.7
HDAC4-205ENST00000454542 SEC22CQ9BRL7 303 aa10.66□□□□□ -0.7
HDAC4-205ENST00000454542 IFNA21P01568 189 aa10.65□□□□□ -0.7
HDAC4-205ENST00000454542 IL5P05113 134 aa10.65□□□□□ -0.7
HDAC4-205ENST00000454542 RND2P52198 227 aa10.65□□□□□ -0.7
HDAC4-205ENST00000454542 DEFB121Q5J5C9 76 aa10.65□□□□□ -0.7
HDAC4-205ENST00000454542 ETFRF1Q6IPR1 90 aa10.65□□□□□ -0.7
HDAC4-205ENST00000454542 ZBTB8BQ8NAP8 495 aaPredicted RBP10.65□□□□□ -0.7
HDAC4-205ENST00000454542 ENKURQ8TC29 256 aa10.65□□□□□ -0.7
HDAC4-205ENST00000454542 WDR89Q96FK6 387 aaPredicted RBP10.65□□□□□ -0.7
HDAC4-205ENST00000454542 PUS1Q9Y606 427 aaKnown RBP eCLIP10.65□□□□□ -0.7
HDAC4-205ENST00000454542 COL7A1Q02388 2944 aa10.65□□□□□ -0.7
HDAC4-205ENST00000454542 IGHV3OR16-8A0A075B7F1 116 aa10.64□□□□□ -0.71
HDAC4-205ENST00000454542 TRAV30A0A087WSZ9 112 aa10.64□□□□□ -0.71
HDAC4-205ENST00000454542 IGHV7-4-1A0A0J9YVY3 117 aa10.64□□□□□ -0.71
HDAC4-205ENST00000454542 SCGB2A1O75556 95 aa10.64□□□□□ -0.71
HDAC4-205ENST00000454542 GPX4P36969 197 aaPredicted RBP10.64□□□□□ -0.71
HDAC4-205ENST00000454542 NKX2-1P43699 371 aaPredicted RBP10.64□□□□□ -0.71
HDAC4-205ENST00000454542 IAH1Q2TAA2 248 aaPredicted RBP10.64□□□□□ -0.71
HDAC4-205ENST00000454542 NRARPQ7Z6K4 114 aa10.64□□□□□ -0.71
HDAC4-205ENST00000454542 GINS3Q9BRX5 216 aa10.64□□□□□ -0.71
HDAC4-205ENST00000454542 C20orf24Q9BUV8 137 aa10.64□□□□□ -0.71
HDAC4-205ENST00000454542 MAGT1Q9H0U3 335 aa10.64□□□□□ -0.71
HDAC4-205ENST00000454542 C19orf73Q9NVV2 129 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms