RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 K7EMT4 169 aa10.39□□□□□ -0.75
RFTN1-207ENST00000453536 CYB5BO43169 146 aa10.39□□□□□ -0.75
RFTN1-207ENST00000453536 TMEM50AO95807 157 aa10.39□□□□□ -0.75
RFTN1-207ENST00000453536 TNFRSF9Q07011 255 aa10.39□□□□□ -0.75
RFTN1-207ENST00000453536 PMS2P11Q13670 270 aa10.39□□□□□ -0.75
RFTN1-207ENST00000453536 TMEM187Q14656 261 aa10.39□□□□□ -0.75
RFTN1-207ENST00000453536 BSXQ3C1V8 233 aa10.39□□□□□ -0.75
RFTN1-207ENST00000453536 FAM219AQ8IW50 185 aa10.39□□□□□ -0.75
RFTN1-207ENST00000453536 MCFD2Q8NI22 146 aa10.39□□□□□ -0.75
RFTN1-207ENST00000453536 MAP6D1Q9H9H5 199 aa10.39□□□□□ -0.75
RFTN1-207ENST00000453536 C14orf166Q9Y224 244 aaKnown RBP10.39□□□□□ -0.75
RFTN1-207ENST00000453536 V9GYH0 126 aa10.39□□□□□ -0.75
RFTN1-207ENST00000453536 BIRC6Q9NR09 4857 aa10.39□□□□□ -0.75
RFTN1-207ENST00000453536 FRAS1Q86XX4 4008 aa10.38□□□□□ -0.75
RFTN1-207ENST00000453536 DISC1C4P0D8 188 aa10.38□□□□□ -0.75
RFTN1-207ENST00000453536 CTDSPLO15194 276 aa10.38□□□□□ -0.75
RFTN1-207ENST00000453536 GSTZ1O43708 216 aaPredicted RBP10.38□□□□□ -0.75
RFTN1-207ENST00000453536 DFFBO76075 338 aa10.38□□□□□ -0.75
RFTN1-207ENST00000453536 SNCAP37840 140 aa10.38□□□□□ -0.75
RFTN1-207ENST00000453536 OPRK1P41145 380 aa10.38□□□□□ -0.75
RFTN1-207ENST00000453536 RPL5P46777 297 aaKnown RBP10.38□□□□□ -0.75
RFTN1-207ENST00000453536 ZNF79Q15937 498 aa10.38□□□□□ -0.75
RFTN1-207ENST00000453536 LEMD1Q68G75 181 aa10.38□□□□□ -0.75
RFTN1-207ENST00000453536 TCF24Q7RTU0 167 aa10.38□□□□□ -0.75
RFTN1-207ENST00000453536 RBPMSQ93062 196 aaKnown RBP10.38□□□□□ -0.75
RFTN1-207ENST00000453536 TRIM63Q969Q1 353 aa10.38□□□□□ -0.75
RFTN1-207ENST00000453536 MCUBQ9NWR8 336 aa10.38□□□□□ -0.75
RFTN1-207ENST00000453536 TRAV14DV4A0A0A6YYC5 116 aa10.37□□□□□ -0.75
RFTN1-207ENST00000453536 IGKV1-17P01599 117 aa10.37□□□□□ -0.75
RFTN1-207ENST00000453536 AKR1C4P17516 323 aa10.37□□□□□ -0.75
RFTN1-207ENST00000453536 RELQ04864 619 aaPredicted RBP10.37□□□□□ -0.75
RFTN1-207ENST00000453536 KLF9Q13886 244 aaPredicted RBP10.37□□□□□ -0.75
RFTN1-207ENST00000453536 LYZL2Q7Z4W2 148 aa10.37□□□□□ -0.75
RFTN1-207ENST00000453536 RRNAD1Q96FB5 475 aaKnown RBP10.37□□□□□ -0.75
RFTN1-207ENST00000453536 RBM38Q9H0Z9 239 aaKnown RBP10.37□□□□□ -0.75
RFTN1-207ENST00000453536 INS-IGF2F8WCM5 200 aa10.36□□□□□ -0.75
RFTN1-207ENST00000453536 MRPS10P82664 201 aaKnown RBP10.36□□□□□ -0.75
RFTN1-207ENST00000453536 SSBP1Q04837 148 aaKnown RBP10.36□□□□□ -0.75
RFTN1-207ENST00000453536 RBMS2Q15434 407 aaKnown RBP10.36□□□□□ -0.75
RFTN1-207ENST00000453536 ANKRD55Q3KP44 614 aa10.36□□□□□ -0.75
RFTN1-207ENST00000453536 AARDQ4LEZ3 155 aa10.36□□□□□ -0.75
RFTN1-207ENST00000453536 DUSP18Q8NEJ0 188 aa10.36□□□□□ -0.75
RFTN1-207ENST00000453536 ATP6V0BQ99437 205 aa10.36□□□□□ -0.75
RFTN1-207ENST00000453536 TXN2Q99757 166 aa10.36□□□□□ -0.75
RFTN1-207ENST00000453536 PDCD10Q9BUL8 212 aa10.36□□□□□ -0.75
RFTN1-207ENST00000453536 MS4A6AQ9H2W1 248 aa10.36□□□□□ -0.75
RFTN1-207ENST00000453536 VSIRQ9H7M9 311 aa10.36□□□□□ -0.75
RFTN1-207ENST00000453536 VPS13DQ5THJ4 4388 aa10.36□□□□□ -0.75
RFTN1-207ENST00000453536 FABP12A6NFH5 140 aa10.35□□□□□ -0.75
RFTN1-207ENST00000453536 OR4C46A6NHA9 309 aa10.35□□□□□ -0.75
RFTN1-207ENST00000453536 CEBPZOSA8MTT3 80 aa10.35□□□□□ -0.75
RFTN1-207ENST00000453536 CLN5O75503 358 aa10.35□□□□□ -0.75
RFTN1-207ENST00000453536 RND2P52198 227 aa10.35□□□□□ -0.75
RFTN1-207ENST00000453536 SPCS3P61009 180 aa10.35□□□□□ -0.75
RFTN1-207ENST00000453536 LAMTOR1Q6IAA8 161 aa10.35□□□□□ -0.75
RFTN1-207ENST00000453536 PRSS54Q6PEW0 395 aa10.35□□□□□ -0.75
RFTN1-207ENST00000453536 ZNF600Q6ZNG1 722 aa10.35□□□□□ -0.75
RFTN1-207ENST00000453536 LYG2Q86SG7 212 aa10.35□□□□□ -0.75
RFTN1-207ENST00000453536 IL17DQ8TAD2 202 aa10.35□□□□□ -0.75
RFTN1-207ENST00000453536 C15orf40Q8WUR7 153 aa10.35□□□□□ -0.75
RFTN1-207ENST00000453536 ENY2Q9NPA8 101 aa10.35□□□□□ -0.75
RFTN1-207ENST00000453536 HEYLQ9NQ87 328 aaPredicted RBP10.35□□□□□ -0.75
RFTN1-207ENST00000453536 TMEM56-RWDD3S4R434 201 aa10.35□□□□□ -0.75
RFTN1-207ENST00000453536 CCDC160A6NGH7 325 aa10.34□□□□□ -0.75
RFTN1-207ENST00000453536 DEFB4AO15263 64 aa10.34□□□□□ -0.75
RFTN1-207ENST00000453536 SPRY2O43597 315 aa10.34□□□□□ -0.75
RFTN1-207ENST00000453536 NPBWR1P48145 328 aa10.34□□□□□ -0.75
RFTN1-207ENST00000453536 DEFB131AP59861 70 aa10.34□□□□□ -0.75
RFTN1-207ENST00000453536 SURF2Q15527 256 aaPredicted RBP10.34□□□□□ -0.75
RFTN1-207ENST00000453536 PYDC2Q56P42 97 aa10.34□□□□□ -0.75
RFTN1-207ENST00000453536 NMSQ5H8A3 153 aa10.34□□□□□ -0.75
RFTN1-207ENST00000453536 TMED4Q7Z7H5 227 aa10.34□□□□□ -0.75
RFTN1-207ENST00000453536 SLC24A4Q8NFF2 622 aa10.34□□□□□ -0.75
RFTN1-207ENST00000453536 OR4X1Q8NH49 305 aa10.34□□□□□ -0.75
RFTN1-207ENST00000453536 PRRT1Q99946 306 aa10.34□□□□□ -0.75
RFTN1-207ENST00000453536 RBKSQ9H477 322 aa10.34□□□□□ -0.75
RFTN1-207ENST00000453536 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.34□□□□□ -0.75
RFTN1-207ENST00000453536 DNAH10Q8IVF4 4471 aa10.33□□□□□ -0.76
RFTN1-207ENST00000453536 KNCNA6PVL3 124 aa10.33□□□□□ -0.76
RFTN1-207ENST00000453536 IGLC1P0CG04 106 aa10.33□□□□□ -0.76
RFTN1-207ENST00000453536 DEFB1P60022 68 aa10.33□□□□□ -0.76
RFTN1-207ENST00000453536 DHODHQ02127 395 aa10.33□□□□□ -0.76
RFTN1-207ENST00000453536 USF2Q15853 346 aaPredicted RBP10.33□□□□□ -0.76
RFTN1-207ENST00000453536 BCL7BQ9BQE9 202 aa10.33□□□□□ -0.76
RFTN1-207ENST00000453536 RABAC1Q9UI14 185 aa10.33□□□□□ -0.76
RFTN1-207ENST00000453536 NOL3O60936 208 aaKnown RBP10.32□□□□□ -0.76
RFTN1-207ENST00000453536 IAPPP10997 89 aa10.32□□□□□ -0.76
RFTN1-207ENST00000453536 RPL11P62913 178 aaKnown RBP10.32□□□□□ -0.76
RFTN1-207ENST00000453536 C2orf83Q53S99 150 aa10.32□□□□□ -0.76
RFTN1-207ENST00000453536 STXBP6Q8NFX7 210 aa10.32□□□□□ -0.76
RFTN1-207ENST00000453536 NPIPB3Q92617 1050 aa10.32□□□□□ -0.76
RFTN1-207ENST00000453536 RNF183Q96D59 192 aa10.32□□□□□ -0.76
RFTN1-207ENST00000453536 GALNT14Q96FL9 552 aa10.32□□□□□ -0.76
RFTN1-207ENST00000453536 ACY3Q96HD9 319 aa10.32□□□□□ -0.76
RFTN1-207ENST00000453536 RSL24D1Q9UHA3 163 aaKnown RBP10.32□□□□□ -0.76
RFTN1-207ENST00000453536 ATG12O94817 140 aa10.31□□□□□ -0.76
RFTN1-207ENST00000453536 GIG44P09565 113 aaPredicted RBP10.31□□□□□ -0.76
RFTN1-207ENST00000453536 ZNF688P0C7X2 276 aa10.31□□□□□ -0.76
RFTN1-207ENST00000453536 SULT1A3P0DMM9 295 aa10.31□□□□□ -0.76
RFTN1-207ENST00000453536 SULT1A4P0DMN0 295 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms