RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 WFDC9Q8NEX5 89 aa6.72□□□□□ -1.33
COL28A1-205ENST00000453441 OR11H1Q8NG94 326 aa6.72□□□□□ -1.33
COL28A1-205ENST00000453441 ZNF502Q8TBZ5 544 aa6.72□□□□□ -1.33
COL28A1-205ENST00000453441 ASB13Q8WXK3 278 aa6.72□□□□□ -1.33
COL28A1-205ENST00000453441 RCC1LQ96I51 464 aaKnown RBP6.72□□□□□ -1.33
COL28A1-205ENST00000453441 KRTAP9-9Q9BYP9 154 aa6.72□□□□□ -1.33
COL28A1-205ENST00000453441 KRTAP9-4Q9BYQ2 154 aa6.72□□□□□ -1.33
COL28A1-205ENST00000453441 C21orf62Q9NYP8 219 aa6.72□□□□□ -1.33
COL28A1-205ENST00000453441 TRRAPQ9Y4A5 3859 aa6.72□□□□□ -1.33
COL28A1-205ENST00000453441 FAM25EA8MYX2 175 aa6.71□□□□□ -1.34
COL28A1-205ENST00000453441 I3L2K1 104 aa6.71□□□□□ -1.34
COL28A1-205ENST00000453441 K7EIM0 57 aa6.71□□□□□ -1.34
COL28A1-205ENST00000453441 TSC22D2O75157 780 aa6.71□□□□□ -1.34
COL28A1-205ENST00000453441 GGCTO75223 188 aaKnown RBP6.71□□□□□ -1.34
COL28A1-205ENST00000453441 MT-CO2P00403 227 aa6.71□□□□□ -1.34
COL28A1-205ENST00000453441 PVALBP20472 110 aaPredicted RBP6.71□□□□□ -1.34
COL28A1-205ENST00000453441 NPBWR1P48145 328 aa6.71□□□□□ -1.34
COL28A1-205ENST00000453441 MFAP2P55001 183 aa6.71□□□□□ -1.34
COL28A1-205ENST00000453441 RPEL1Q2QD12 228 aa6.71□□□□□ -1.34
COL28A1-205ENST00000453441 C18orf65Q6ZTR6 163 aa6.71□□□□□ -1.34
COL28A1-205ENST00000453441 SCARB1Q8WTV0 552 aa6.71□□□□□ -1.34
COL28A1-205ENST00000453441 DCUN1D4Q92564 292 aa6.71□□□□□ -1.34
COL28A1-205ENST00000453441 BSCL2Q96G97 398 aaPredicted RBP6.71□□□□□ -1.34
COL28A1-205ENST00000453441 SMIM8Q96KF7 97 aa6.71□□□□□ -1.34
COL28A1-205ENST00000453441 OR10C1Q96KK4 312 aa6.71□□□□□ -1.34
COL28A1-205ENST00000453441 OR5B12Q96R08 314 aa6.71□□□□□ -1.34
COL28A1-205ENST00000453441 NMES1Q9C002 83 aa6.71□□□□□ -1.34
COL28A1-205ENST00000453441 GSKIPQ9P0R6 139 aa6.71□□□□□ -1.34
COL28A1-205ENST00000453441 ZMAT5Q9UDW3 170 aaKnown RBP6.71□□□□□ -1.34
COL28A1-205ENST00000453441 DMRT1Q9Y5R6 373 aa6.71□□□□□ -1.34
COL28A1-205ENST00000453441 NOTCH3Q9UM47 2321 aa6.71□□□□□ -1.34
COL28A1-205ENST00000453441 IGHV4OR15-8A0A075B7B6 117 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 TRAV30A0A087WSZ9 112 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 A0A087WW49 117 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 ANKRD34BA5PLL1 514 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 MFSD2BA6NFX1 497 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 MPTX1A8MV57 137 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 L7N2F9 121 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 GOSR2O14653 212 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 TGOLN2O43493 480 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 NXPH3O95157 252 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 PET100P0DJ07 73 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 SPNP16150 400 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 HOXD3P31249 432 aaPredicted RBP6.7□□□□□ -1.34
COL28A1-205ENST00000453441 ARL3P36405 182 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 GPX4P36969 197 aaPredicted RBP6.7□□□□□ -1.34
COL28A1-205ENST00000453441 OPRK1P41145 380 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 INSL3P51460 131 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 VAMP2P63027 116 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 RELQ04864 619 aaPredicted RBP6.7□□□□□ -1.34
COL28A1-205ENST00000453441 DEFB136Q30KP8 78 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 C19orf35Q6ZS72 473 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 GPHB5Q86YW7 130 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 C1QL4Q86Z23 238 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 CACNG8Q8WXS5 425 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 ANAPC16Q96DE5 110 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 CCDC140Q96MF4 163 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 STRAPQ9Y3F4 350 aaKnown RBP6.7□□□□□ -1.34
COL28A1-205ENST00000453441 ALG5Q9Y673 324 aa6.7□□□□□ -1.34
COL28A1-205ENST00000453441 LGALS9O00182 355 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 BMPR1BO00238 502 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 CCSO14618 274 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 OVOL1O14753 267 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 NUPL2O15504 423 aaKnown RBP6.69□□□□□ -1.34
COL28A1-205ENST00000453441 SSSCA1O60232 199 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 GNG7O60262 68 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 SCGB1D2O95969 90 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 MBPP02686 304 aaPredicted RBP6.69□□□□□ -1.34
COL28A1-205ENST00000453441 RLN2P04090 185 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 IFNA4P05014 189 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 CLEC3BP05452 202 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 GPR183P32249 361 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 POLR2GP62487 172 aaKnown RBP eCLIP6.69□□□□□ -1.34
COL28A1-205ENST00000453441 CD69Q07108 199 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 IL15RAQ13261 267 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 FAM106AQ4KMX7 169 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 Q56UQ5 140 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 HIST2H2BDQ6DRA6 164 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 ACSM6Q6P461 480 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 CLEC19AQ6UXS0 136 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 TMEM116Q8NCL8 245 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 OR4X1Q8NH49 305 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 PINX1Q96BK5 328 aaKnown RBP6.69□□□□□ -1.34
COL28A1-205ENST00000453441 ELOVL1Q9BW60 279 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 MAGT1Q9H0U3 335 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 MED28Q9H204 178 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 PSENENQ9NZ42 101 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 PEMTQ9UBM1 199 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 MGAT4CQ9UBM8 478 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 VWFP04275 2813 aa6.69□□□□□ -1.34
COL28A1-205ENST00000453441 C15orf62A8K5M9 175 aa6.68□□□□□ -1.34
COL28A1-205ENST00000453441 FNDC10F2Z333 226 aa6.68□□□□□ -1.34
COL28A1-205ENST00000453441 K7EPK0 472 aa6.68□□□□□ -1.34
COL28A1-205ENST00000453441 NDUFA4O00483 81 aa6.68□□□□□ -1.34
COL28A1-205ENST00000453441 CLN5O75503 358 aa6.68□□□□□ -1.34
COL28A1-205ENST00000453441 FABP1P07148 127 aa6.68□□□□□ -1.34
COL28A1-205ENST00000453441 IAPPP10997 89 aa6.68□□□□□ -1.34
COL28A1-205ENST00000453441 ELLP55199 621 aaPredicted RBP6.68□□□□□ -1.34
COL28A1-205ENST00000453441 DEFA5Q01523 94 aa6.68□□□□□ -1.34
COL28A1-205ENST00000453441 KLF5Q13887 457 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms