RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 NUDT19A8MXV4 375 aa10.11□□□□□ -0.79
VPS33A-202ENST00000451053 BCL2L11O43521 198 aa10.11□□□□□ -0.79
VPS33A-202ENST00000451053 OR2J3O76001 311 aa10.11□□□□□ -0.79
VPS33A-202ENST00000451053 DFFBO76075 338 aa10.11□□□□□ -0.79
VPS33A-202ENST00000451053 CST7O76096 145 aa10.11□□□□□ -0.79
VPS33A-202ENST00000451053 IGHV3-11P01762 117 aa10.11□□□□□ -0.79
VPS33A-202ENST00000451053 DEFA4P12838 97 aa10.11□□□□□ -0.79
VPS33A-202ENST00000451053 CDX1P47902 265 aaPredicted RBP10.11□□□□□ -0.79
VPS33A-202ENST00000451053 RHOGP84095 191 aa10.11□□□□□ -0.79
VPS33A-202ENST00000451053 ATP6V1FQ16864 119 aa10.11□□□□□ -0.79
VPS33A-202ENST00000451053 KLK9Q2XQG4 91 aa10.11□□□□□ -0.79
VPS33A-202ENST00000451053 ETV3LQ6ZN32 361 aa10.11□□□□□ -0.79
VPS33A-202ENST00000451053 LILRB2Q8N423 598 aa10.11□□□□□ -0.79
VPS33A-202ENST00000451053 KLHL30-AS1Q8NEE0 82 aa10.11□□□□□ -0.79
VPS33A-202ENST00000451053 RNASEH2CQ8TDP1 164 aaKnown RBP10.11□□□□□ -0.79
VPS33A-202ENST00000451053 UBE2E2Q96LR5 201 aa10.11□□□□□ -0.79
VPS33A-202ENST00000451053 OR5B12Q96R08 314 aa10.11□□□□□ -0.79
VPS33A-202ENST00000451053 P2RX4Q99571 388 aa10.11□□□□□ -0.79
VPS33A-202ENST00000451053 GGACTQ9BVM4 153 aa10.11□□□□□ -0.79
VPS33A-202ENST00000451053 KLK9Q9UKQ9 250 aa10.11□□□□□ -0.79
VPS33A-202ENST00000451053 TENM1Q9UKZ4 2725 aa10.11□□□□□ -0.79
VPS33A-202ENST00000451053 NDUFB8O95169 186 aa10.1□□□□□ -0.79
VPS33A-202ENST00000451053 HIST1H1BP16401 226 aaKnown RBP10.1□□□□□ -0.79
VPS33A-202ENST00000451053 EIF5AP63241 154 aaKnown RBP10.1□□□□□ -0.79
VPS33A-202ENST00000451053 NHLH2Q02577 135 aa10.1□□□□□ -0.79
VPS33A-202ENST00000451053 SLC38A11Q08AI6 406 aa10.1□□□□□ -0.79
VPS33A-202ENST00000451053 EXOSC2Q13868 293 aaKnown RBP10.1□□□□□ -0.79
VPS33A-202ENST00000451053 ZNF266Q14584 549 aa10.1□□□□□ -0.79
VPS33A-202ENST00000451053 PVRIGQ6DKI7 326 aa10.1□□□□□ -0.79
VPS33A-202ENST00000451053 LAMTOR1Q6IAA8 161 aa10.1□□□□□ -0.79
VPS33A-202ENST00000451053 OR8G2PQ6IF36 304 aa10.1□□□□□ -0.79
VPS33A-202ENST00000451053 C8orf86Q6ZUL3 223 aa10.1□□□□□ -0.79
VPS33A-202ENST00000451053 TMEM217Q8N7C4 229 aa10.1□□□□□ -0.79
VPS33A-202ENST00000451053 OR5C1Q8NGR4 320 aa10.1□□□□□ -0.79
VPS33A-202ENST00000451053 C4orf3Q8WVX3 66 aa10.1□□□□□ -0.79
VPS33A-202ENST00000451053 THYN1Q9P016 225 aa10.1□□□□□ -0.79
VPS33A-202ENST00000451053 FBXL17Q9UF56 701 aa10.1□□□□□ -0.79
VPS33A-202ENST00000451053 FBXL7Q9UJT9 491 aa10.1□□□□□ -0.79
VPS33A-202ENST00000451053 BORCS7-ASMTA0A0B4J1R7 106 aa10.09□□□□□ -0.79
VPS33A-202ENST00000451053 RPS10-NUDT3A0A1W2PQS6 291 aa10.09□□□□□ -0.79
VPS33A-202ENST00000451053 FAM223BA6NKX1 122 aa10.09□□□□□ -0.79
VPS33A-202ENST00000451053 PMS2P5A8MQ11 134 aa10.09□□□□□ -0.79
VPS33A-202ENST00000451053 FNDC10F2Z333 226 aa10.09□□□□□ -0.79
VPS33A-202ENST00000451053 I3L521 148 aa10.09□□□□□ -0.79
VPS33A-202ENST00000451053 TSPAN15O95858 294 aa10.09□□□□□ -0.79
VPS33A-202ENST00000451053 GPX4P36969 197 aaPredicted RBP10.09□□□□□ -0.79
VPS33A-202ENST00000451053 DLK1P80370 383 aa10.09□□□□□ -0.79
VPS33A-202ENST00000451053 OPCMLQ14982 345 aa10.09□□□□□ -0.79
VPS33A-202ENST00000451053 DEFB136Q30KP8 78 aa10.09□□□□□ -0.79
VPS33A-202ENST00000451053 ETFRF1Q6IPR1 90 aa10.09□□□□□ -0.79
VPS33A-202ENST00000451053 SLC25A24Q6NUK1 477 aa10.09□□□□□ -0.79
VPS33A-202ENST00000451053 FAM223AQ8IWN6 122 aa10.09□□□□□ -0.79
VPS33A-202ENST00000451053 NECAP1Q8NC96 275 aa10.09□□□□□ -0.79
VPS33A-202ENST00000451053 TMEM170AQ8WVE7 144 aa10.09□□□□□ -0.79
VPS33A-202ENST00000451053 USMG5Q96IX5 58 aa10.09□□□□□ -0.79
VPS33A-202ENST00000451053 ATP5SQ99766 215 aa10.09□□□□□ -0.79
VPS33A-202ENST00000451053 S4R3C0 116 aa10.09□□□□□ -0.79
VPS33A-202ENST00000451053 STAB1Q9NY15 2570 aa10.09□□□□□ -0.79
VPS33A-202ENST00000451053 A0A0G2JLM5 398 aa10.08□□□□□ -0.8
VPS33A-202ENST00000451053 M0QZ24 198 aa10.08□□□□□ -0.8
VPS33A-202ENST00000451053 JTBO76095 146 aa10.08□□□□□ -0.8
VPS33A-202ENST00000451053 IFNA5P01569 189 aa10.08□□□□□ -0.8
VPS33A-202ENST00000451053 LGALS1P09382 135 aaKnown RBP10.08□□□□□ -0.8
VPS33A-202ENST00000451053 ATP5G2Q06055 141 aa10.08□□□□□ -0.8
VPS33A-202ENST00000451053 C15orf32Q32M92 178 aa10.08□□□□□ -0.8
VPS33A-202ENST00000451053 SLC51BQ86UW2 128 aa10.08□□□□□ -0.8
VPS33A-202ENST00000451053 CACNG8Q8WXS5 425 aa10.08□□□□□ -0.8
VPS33A-202ENST00000451053 MISP3Q96FF7 219 aa10.08□□□□□ -0.8
VPS33A-202ENST00000451053 RAX2Q96IS3 184 aa10.08□□□□□ -0.8
VPS33A-202ENST00000451053 DUX3Q96PT4 197 aa10.08□□□□□ -0.8
VPS33A-202ENST00000451053 TMEM147Q9BVK8 224 aa10.08□□□□□ -0.8
VPS33A-202ENST00000451053 SMIM3Q9BZL3 60 aa10.08□□□□□ -0.8
VPS33A-202ENST00000451053 UQCC1Q9NVA1 299 aa10.08□□□□□ -0.8
VPS33A-202ENST00000451053 IGHV3-21A0A0B4J1V1 117 aa10.07□□□□□ -0.8
VPS33A-202ENST00000451053 MFSD2BA6NFX1 497 aa10.07□□□□□ -0.8
VPS33A-202ENST00000451053 PRSS46E5RG02 174 aa10.07□□□□□ -0.8
VPS33A-202ENST00000451053 IGHV3-23P01764 117 aa10.07□□□□□ -0.8
VPS33A-202ENST00000451053 OPRK1P41145 380 aa10.07□□□□□ -0.8
VPS33A-202ENST00000451053 RUNX1Q01196 453 aa10.07□□□□□ -0.8
VPS33A-202ENST00000451053 CD69Q07108 199 aa10.07□□□□□ -0.8
VPS33A-202ENST00000451053 CLINT1Q14677 625 aa10.07□□□□□ -0.8
VPS33A-202ENST00000451053 HAPLN4Q86UW8 402 aa10.07□□□□□ -0.8
VPS33A-202ENST00000451053 SLC35E1Q96K37 410 aa10.07□□□□□ -0.8
VPS33A-202ENST00000451053 ZNF471Q9BX82 626 aaPredicted RBP10.07□□□□□ -0.8
VPS33A-202ENST00000451053 ANKRD34BA5PLL1 514 aa10.06□□□□□ -0.8
VPS33A-202ENST00000451053 K7EIM0 57 aa10.06□□□□□ -0.8
VPS33A-202ENST00000451053 TRBV12-3P01733 135 aa10.06□□□□□ -0.8
VPS33A-202ENST00000451053 ARL16Q0P5N6 197 aa10.06□□□□□ -0.8
VPS33A-202ENST00000451053 VWC2Q2TAL6 325 aa10.06□□□□□ -0.8
VPS33A-202ENST00000451053 ZNF343Q6P1L6 599 aa10.06□□□□□ -0.8
VPS33A-202ENST00000451053 SLC16A13Q7RTY0 426 aa10.06□□□□□ -0.8
VPS33A-202ENST00000451053 UBAC2Q8NBM4 344 aa10.06□□□□□ -0.8
VPS33A-202ENST00000451053 OR4F17Q8NGA8 305 aa10.06□□□□□ -0.8
VPS33A-202ENST00000451053 SCGB1C1Q8TD33 95 aa10.06□□□□□ -0.8
VPS33A-202ENST00000451053 CCDC140Q96MF4 163 aa10.06□□□□□ -0.8
VPS33A-202ENST00000451053 OR4F4Q96R69 305 aa10.06□□□□□ -0.8
VPS33A-202ENST00000451053 PARD6GQ9BYG4 376 aaPredicted RBP10.06□□□□□ -0.8
VPS33A-202ENST00000451053 IGHV4OR15-8A0A075B7B6 117 aa10.05□□□□□ -0.8
VPS33A-202ENST00000451053 A0A087WW49 117 aa10.05□□□□□ -0.8
VPS33A-202ENST00000451053 UBE2L5PA0A1B0GUS4 154 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms