RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 SRD5A3Q9H8P0 318 aa13.13□□□□□ -0.31
FAM3A-216ENST00000449971 PRR13Q9NZ81 148 aa13.13□□□□□ -0.31
FAM3A-216ENST00000449971 CACNG5Q9UF02 275 aa13.13□□□□□ -0.31
FAM3A-216ENST00000449971 TMEM56-RWDD3S4R434 201 aa13.13□□□□□ -0.31
FAM3A-216ENST00000449971 ZNF701M0R085 212 aaPredicted RBP13.12□□□□□ -0.31
FAM3A-216ENST00000449971 RNASE2P10153 161 aaKnown RBP13.12□□□□□ -0.31
FAM3A-216ENST00000449971 NPBWR1P48145 328 aa13.12□□□□□ -0.31
FAM3A-216ENST00000449971 TMEM187Q14656 261 aa13.12□□□□□ -0.31
FAM3A-216ENST00000449971 CCDC190Q86UF4 302 aa13.12□□□□□ -0.31
FAM3A-216ENST00000449971 C15orf62A8K5M9 175 aa13.11□□□□□ -0.31
FAM3A-216ENST00000449971 LY6G6CO95867 125 aa13.11□□□□□ -0.31
FAM3A-216ENST00000449971 ZNF79Q15937 498 aa13.11□□□□□ -0.31
FAM3A-216ENST00000449971 LAMTOR1Q6IAA8 161 aa13.11□□□□□ -0.31
FAM3A-216ENST00000449971 OR52E5Q8NH55 327 aa13.11□□□□□ -0.31
FAM3A-216ENST00000449971 IL22RA2Q969J5 263 aa13.11□□□□□ -0.31
FAM3A-216ENST00000449971 TRIM63Q969Q1 353 aa13.11□□□□□ -0.31
FAM3A-216ENST00000449971 GALNT14Q96FL9 552 aa13.11□□□□□ -0.31
FAM3A-216ENST00000449971 HEYLQ9NQ87 328 aaPredicted RBP13.11□□□□□ -0.31
FAM3A-216ENST00000449971 CEBPZOSA8MTT3 80 aa13.1□□□□□ -0.31
FAM3A-216ENST00000449971 CORTO00230 105 aa13.1□□□□□ -0.31
FAM3A-216ENST00000449971 ANXA3P12429 323 aa13.1□□□□□ -0.31
FAM3A-216ENST00000449971 AARDQ4LEZ3 155 aa13.1□□□□□ -0.31
FAM3A-216ENST00000449971 SPANXN2Q5MJ10 180 aa13.1□□□□□ -0.31
FAM3A-216ENST00000449971 PVRIGQ6DKI7 326 aa13.1□□□□□ -0.31
FAM3A-216ENST00000449971 LINC00322Q6ZN03 302 aaPredicted RBP13.1□□□□□ -0.31
FAM3A-216ENST00000449971 TMED4Q7Z7H5 227 aa13.1□□□□□ -0.31
FAM3A-216ENST00000449971 SMPXQ9UHP9 88 aa13.1□□□□□ -0.31
FAM3A-216ENST00000449971 IGHV3-49A0A0A0MS15 119 aa13.09□□□□□ -0.31
FAM3A-216ENST00000449971 NXPH3O95157 252 aa13.09□□□□□ -0.31
FAM3A-216ENST00000449971 TMEM50AO95807 157 aa13.09□□□□□ -0.31
FAM3A-216ENST00000449971 SULT1A3P0DMM9 295 aa13.09□□□□□ -0.31
FAM3A-216ENST00000449971 SULT1A4P0DMN0 295 aa13.09□□□□□ -0.31
FAM3A-216ENST00000449971 OPRK1P41145 380 aa13.09□□□□□ -0.31
FAM3A-216ENST00000449971 MLANAQ16655 118 aa13.09□□□□□ -0.31
FAM3A-216ENST00000449971 ZNF414Q96IQ9 312 aa13.09□□□□□ -0.31
FAM3A-216ENST00000449971 SPAG8Q99932 426 aaPredicted RBP13.09□□□□□ -0.31
FAM3A-216ENST00000449971 HERC2O95714 4834 aa13.08□□□□□ -0.32
FAM3A-216ENST00000449971 TRAV14DV4A0A0A6YYC5 116 aa13.08□□□□□ -0.32
FAM3A-216ENST00000449971 IGHV7-4-1A0A0J9YVY3 117 aa13.08□□□□□ -0.32
FAM3A-216ENST00000449971 TSPAN4O14817 238 aa13.08□□□□□ -0.32
FAM3A-216ENST00000449971 HTR2BP41595 481 aa13.08□□□□□ -0.32
FAM3A-216ENST00000449971 SUPT4H1P63272 117 aaKnown RBP13.08□□□□□ -0.32
FAM3A-216ENST00000449971 LYZL2Q7Z4W2 148 aa13.08□□□□□ -0.32
FAM3A-216ENST00000449971 LGI3Q8N145 548 aa13.08□□□□□ -0.32
FAM3A-216ENST00000449971 TMEM116Q8NCL8 245 aa13.08□□□□□ -0.32
FAM3A-216ENST00000449971 OR10C1Q96KK4 312 aa13.08□□□□□ -0.32
FAM3A-216ENST00000449971 RHPN1-AS1Q9BWJ2 59 aa13.08□□□□□ -0.32
FAM3A-216ENST00000449971 HIPK2Q9H2X6 1198 aa13.08□□□□□ -0.32
FAM3A-216ENST00000449971 A0A0B4J2A0 478 aa13.07□□□□□ -0.32
FAM3A-216ENST00000449971 CHEK1O14757 476 aa13.07□□□□□ -0.32
FAM3A-216ENST00000449971 INPP1P49441 399 aa13.07□□□□□ -0.32
FAM3A-216ENST00000449971 SRPXP78539 464 aa13.07□□□□□ -0.32
FAM3A-216ENST00000449971 BSXQ3C1V8 233 aa13.07□□□□□ -0.32
FAM3A-216ENST00000449971 TOMM20LQ6UXN7 152 aa13.07□□□□□ -0.32
FAM3A-216ENST00000449971 LINC00476Q8WZB0 136 aa13.07□□□□□ -0.32
FAM3A-216ENST00000449971 RNF2Q99496 336 aa13.07□□□□□ -0.32
FAM3A-216ENST00000449971 FNDC4Q9H6D8 234 aaPredicted RBP13.07□□□□□ -0.32
FAM3A-216ENST00000449971 CACFD1Q9UGQ2 172 aa13.07□□□□□ -0.32
FAM3A-216ENST00000449971 SHPKQ9UHJ6 478 aa13.07□□□□□ -0.32
FAM3A-216ENST00000449971 IGHV3OR16-13A0A075B7E8 117 aa13.06□□□□□ -0.32
FAM3A-216ENST00000449971 IGHV3-74A0A0B4J1X5 117 aa13.06□□□□□ -0.32
FAM3A-216ENST00000449971 CCR6P51684 374 aa13.06□□□□□ -0.32
FAM3A-216ENST00000449971 SMCO1Q147U7 214 aa13.06□□□□□ -0.32
FAM3A-216ENST00000449971 ZNF600Q6ZNG1 722 aa13.06□□□□□ -0.32
FAM3A-216ENST00000449971 DEDD2Q8WXF8 326 aa13.06□□□□□ -0.32
FAM3A-216ENST00000449971 SLC25A21Q9BQT8 299 aaPredicted RBP13.06□□□□□ -0.32
FAM3A-216ENST00000449971 GINS3Q9BRX5 216 aa13.06□□□□□ -0.32
FAM3A-216ENST00000449971 SRRQ9GZT4 340 aa13.06□□□□□ -0.32
FAM3A-216ENST00000449971 MRPL36Q9P0J6 103 aaKnown RBP13.06□□□□□ -0.32
FAM3A-216ENST00000449971 UBQLN2Q9UHD9 624 aa13.06□□□□□ -0.32
FAM3A-216ENST00000449971 PUS1Q9Y606 427 aaKnown RBP eCLIP13.06□□□□□ -0.32
FAM3A-216ENST00000449971 KMT2AQ03164 3969 aa13.05□□□□□ -0.32
FAM3A-216ENST00000449971 RPS10-NUDT3A0A1W2PQS6 291 aa13.05□□□□□ -0.32
FAM3A-216ENST00000449971 OR4C46A6NHA9 309 aa13.05□□□□□ -0.32
FAM3A-216ENST00000449971 CLN5O75503 358 aa13.05□□□□□ -0.32
FAM3A-216ENST00000449971 VAMP1P23763 118 aa13.05□□□□□ -0.32
FAM3A-216ENST00000449971 C2orf83Q53S99 150 aa13.05□□□□□ -0.32
FAM3A-216ENST00000449971 TMEM128Q5BJH2 165 aa13.05□□□□□ -0.32
FAM3A-216ENST00000449971 NMSQ5H8A3 153 aa13.05□□□□□ -0.32
FAM3A-216ENST00000449971 SLC24A4Q8NFF2 622 aa13.05□□□□□ -0.32
FAM3A-216ENST00000449971 OR4X1Q8NH49 305 aa13.05□□□□□ -0.32
FAM3A-216ENST00000449971 IGKV3-7A0A075B6H7 116 aa13.04□□□□□ -0.32
FAM3A-216ENST00000449971 SCGB2A1O75556 95 aa13.04□□□□□ -0.32
FAM3A-216ENST00000449971 PMS2P11Q13670 270 aa13.04□□□□□ -0.32
FAM3A-216ENST00000449971 TRIQKQ629K1 86 aa13.04□□□□□ -0.32
FAM3A-216ENST00000449971 OR1S1Q8NH92 325 aa13.04□□□□□ -0.32
FAM3A-216ENST00000449971 GGTLC1Q9BX51 225 aa13.04□□□□□ -0.32
FAM3A-216ENST00000449971 LOC102724200A0A096LPH7 203 aaPredicted RBP13.03□□□□□ -0.32
FAM3A-216ENST00000449971 PIGBOS1A0A0B4J2F0 54 aa13.03□□□□□ -0.32
FAM3A-216ENST00000449971 A0A1B0GU03 582 aa13.03□□□□□ -0.32
FAM3A-216ENST00000449971 IFNA10P01566 189 aa13.03□□□□□ -0.32
FAM3A-216ENST00000449971 NPY1RP25929 384 aa13.03□□□□□ -0.32
FAM3A-216ENST00000449971 BMI1P35226 326 aa13.03□□□□□ -0.32
FAM3A-216ENST00000449971 TFPI2P48307 235 aa13.03□□□□□ -0.32
FAM3A-216ENST00000449971 TNFRSF9Q07011 255 aa13.03□□□□□ -0.32
FAM3A-216ENST00000449971 BAK1Q16611 211 aa13.03□□□□□ -0.32
FAM3A-216ENST00000449971 NOXA1Q86UR1 476 aa13.03□□□□□ -0.32
FAM3A-216ENST00000449971 RNASEH2CQ8TDP1 164 aaKnown RBP13.03□□□□□ -0.32
FAM3A-216ENST00000449971 RBKSQ9H477 322 aa13.03□□□□□ -0.32
FAM3A-216ENST00000449971 TRAV30A0A087WSZ9 112 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms