RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 DYNLRB2Q8TF09 96 aa11.94□□□□□ -0.5
TOP3B-211ENST00000449704 SEC22CQ9BRL7 303 aa11.94□□□□□ -0.5
TOP3B-211ENST00000449704 ZNF436Q9C0F3 470 aaPredicted RBP11.94□□□□□ -0.5
TOP3B-211ENST00000449704 MAGT1Q9H0U3 335 aa11.94□□□□□ -0.5
TOP3B-211ENST00000449704 FNDC4Q9H6D8 234 aaPredicted RBP11.94□□□□□ -0.5
TOP3B-211ENST00000449704 PALMDQ9NP74 551 aa11.94□□□□□ -0.5
TOP3B-211ENST00000449704 SIGLEC8Q9NYZ4 499 aa11.94□□□□□ -0.5
TOP3B-211ENST00000449704 U3KQ87 197 aa11.94□□□□□ -0.5
TOP3B-211ENST00000449704 IGHV3OR16-8A0A075B7F1 116 aa11.93□□□□□ -0.5
TOP3B-211ENST00000449704 MED6O75586 246 aa11.93□□□□□ -0.5
TOP3B-211ENST00000449704 YIF1AO95070 293 aa11.93□□□□□ -0.5
TOP3B-211ENST00000449704 IAPPP10997 89 aa11.93□□□□□ -0.5
TOP3B-211ENST00000449704 GP9P14770 177 aa11.93□□□□□ -0.5
TOP3B-211ENST00000449704 FCGR2BP31994 310 aaPredicted RBP11.93□□□□□ -0.5
TOP3B-211ENST00000449704 TM4SF20Q53R12 229 aa11.93□□□□□ -0.5
TOP3B-211ENST00000449704 UXS1Q8NBZ7 420 aa11.93□□□□□ -0.5
TOP3B-211ENST00000449704 MITD1Q8WV92 249 aa11.93□□□□□ -0.5
TOP3B-211ENST00000449704 CACNG8Q8WXS5 425 aa11.93□□□□□ -0.5
TOP3B-211ENST00000449704 C20orf24Q9BUV8 137 aa11.93□□□□□ -0.5
TOP3B-211ENST00000449704 UFC1Q9Y3C8 167 aa11.93□□□□□ -0.5
TOP3B-211ENST00000449704 RPS10-NUDT3A0A1W2PQS6 291 aa11.92□□□□□ -0.5
TOP3B-211ENST00000449704 TMEM213A2RRL7 107 aa11.92□□□□□ -0.5
TOP3B-211ENST00000449704 MPTX1A8MV57 137 aa11.92□□□□□ -0.5
TOP3B-211ENST00000449704 FAM90A26D6RGX4 464 aa11.92□□□□□ -0.5
TOP3B-211ENST00000449704 NDUFA4O00483 81 aa11.92□□□□□ -0.5
TOP3B-211ENST00000449704 CBLN1P23435 193 aa11.92□□□□□ -0.5
TOP3B-211ENST00000449704 RELQ04864 619 aaPredicted RBP11.92□□□□□ -0.5
TOP3B-211ENST00000449704 RNASEH2CQ8TDP1 164 aaKnown RBP11.92□□□□□ -0.5
TOP3B-211ENST00000449704 ZNF431Q8TF32 576 aaPredicted RBP11.92□□□□□ -0.5
TOP3B-211ENST00000449704 TMEM170AQ8WVE7 144 aa11.92□□□□□ -0.5
TOP3B-211ENST00000449704 TMEM190Q8WZ59 177 aa11.92□□□□□ -0.5
TOP3B-211ENST00000449704 PAIP2BQ9ULR5 123 aaKnown RBP11.92□□□□□ -0.5
TOP3B-211ENST00000449704 SELENOKQ9Y6D0 94 aa11.92□□□□□ -0.5
TOP3B-211ENST00000449704 A8MWP6 167 aa11.91□□□□□ -0.5
TOP3B-211ENST00000449704 ZNF207O43670 478 aaKnown RBP11.91□□□□□ -0.5
TOP3B-211ENST00000449704 SYNGR2O43760 224 aa11.91□□□□□ -0.5
TOP3B-211ENST00000449704 TMEM50AO95807 157 aa11.91□□□□□ -0.5
TOP3B-211ENST00000449704 IFNA4P05014 189 aa11.91□□□□□ -0.5
TOP3B-211ENST00000449704 DEFA1P59665 94 aa11.91□□□□□ -0.5
TOP3B-211ENST00000449704 DEFA3P59666 94 aa11.91□□□□□ -0.5
TOP3B-211ENST00000449704 OR4X1Q8NH49 305 aa11.91□□□□□ -0.5
TOP3B-211ENST00000449704 MRPL36Q9P0J6 103 aaKnown RBP11.91□□□□□ -0.5
TOP3B-211ENST00000449704 PRKDCP78527 4128 aaKnown RBP11.91□□□□□ -0.5
TOP3B-211ENST00000449704 SORL1Q92673 2214 aa11.91□□□□□ -0.5
TOP3B-211ENST00000449704 IZUMO1RA6ND01 250 aa11.9□□□□□ -0.5
TOP3B-211ENST00000449704 WRBO00258 174 aa11.9□□□□□ -0.5
TOP3B-211ENST00000449704 CLN5O75503 358 aa11.9□□□□□ -0.5
TOP3B-211ENST00000449704 ELLP55199 621 aaPredicted RBP11.9□□□□□ -0.5
TOP3B-211ENST00000449704 IAH1Q2TAA2 248 aaPredicted RBP11.9□□□□□ -0.5
TOP3B-211ENST00000449704 DEFB114Q30KQ6 69 aa11.9□□□□□ -0.5
TOP3B-211ENST00000449704 CD300EQ496F6 205 aaPredicted RBP11.9□□□□□ -0.5
TOP3B-211ENST00000449704 ETFRF1Q6IPR1 90 aa11.9□□□□□ -0.5
TOP3B-211ENST00000449704 LCN12Q6JVE5 192 aa11.9□□□□□ -0.5
TOP3B-211ENST00000449704 NRARPQ7Z6K4 114 aa11.9□□□□□ -0.5
TOP3B-211ENST00000449704 C12orf45Q8N5I9 185 aaPredicted RBP11.9□□□□□ -0.5
TOP3B-211ENST00000449704 MARC2Q969Z3 335 aa11.9□□□□□ -0.5
TOP3B-211ENST00000449704 CIB3Q96Q77 187 aaPredicted RBP11.9□□□□□ -0.5
TOP3B-211ENST00000449704 TECRQ9NZ01 308 aaKnown RBP11.9□□□□□ -0.5
TOP3B-211ENST00000449704 GSKIPQ9P0R6 139 aa11.9□□□□□ -0.5
TOP3B-211ENST00000449704 FAM25EA8MYX2 175 aa11.89□□□□□ -0.51
TOP3B-211ENST00000449704 CCSO14618 274 aa11.89□□□□□ -0.51
TOP3B-211ENST00000449704 SCGB2A1O75556 95 aa11.89□□□□□ -0.51
TOP3B-211ENST00000449704 SLC25A4P12235 298 aa11.89□□□□□ -0.51
TOP3B-211ENST00000449704 NKX2-1P43699 371 aaPredicted RBP11.89□□□□□ -0.51
TOP3B-211ENST00000449704 RND2P52198 227 aa11.89□□□□□ -0.51
TOP3B-211ENST00000449704 ATP5IP56385 69 aaPredicted RBP11.89□□□□□ -0.51
TOP3B-211ENST00000449704 ID3Q02535 119 aa11.89□□□□□ -0.51
TOP3B-211ENST00000449704 DCTN2Q13561 401 aaKnown RBP11.89□□□□□ -0.51
TOP3B-211ENST00000449704 PRSS54Q6PEW0 395 aa11.89□□□□□ -0.51
TOP3B-211ENST00000449704 OR4D5Q8NGN0 318 aa11.89□□□□□ -0.51
TOP3B-211ENST00000449704 OR2K2Q8NGT1 345 aa11.89□□□□□ -0.51
TOP3B-211ENST00000449704 OR10C1Q96KK4 312 aa11.89□□□□□ -0.51
TOP3B-211ENST00000449704 DAZ1Q9NQZ3 744 aaKnown RBP11.89□□□□□ -0.51
TOP3B-211ENST00000449704 MRPL27Q9P0M9 148 aaKnown RBP11.89□□□□□ -0.51
TOP3B-211ENST00000449704 SCGB1D2O95969 90 aa11.88□□□□□ -0.51
TOP3B-211ENST00000449704 POLR2GP62487 172 aaKnown RBP eCLIP11.88□□□□□ -0.51
TOP3B-211ENST00000449704 RAB11AP62491 216 aa11.88□□□□□ -0.51
TOP3B-211ENST00000449704 RPP30P78346 268 aaKnown RBP11.88□□□□□ -0.51
TOP3B-211ENST00000449704 GUCA2BQ16661 112 aa11.88□□□□□ -0.51
TOP3B-211ENST00000449704 BTNL8Q6UX41 500 aa11.88□□□□□ -0.51
TOP3B-211ENST00000449704 ZNF600Q6ZNG1 722 aa11.88□□□□□ -0.51
TOP3B-211ENST00000449704 SLC16A13Q7RTY0 426 aa11.88□□□□□ -0.51
TOP3B-211ENST00000449704 ZBTB8BQ8NAP8 495 aaPredicted RBP11.88□□□□□ -0.51
TOP3B-211ENST00000449704 ACY3Q96HD9 319 aa11.88□□□□□ -0.51
TOP3B-211ENST00000449704 MLXQ9UH92 298 aa11.88□□□□□ -0.51
TOP3B-211ENST00000449704 LSM4Q9Y4Z0 139 aaKnown RBP11.88□□□□□ -0.51
TOP3B-211ENST00000449704 C5orf51A6NDU8 294 aa11.87□□□□□ -0.51
TOP3B-211ENST00000449704 C15orf62A8K5M9 175 aa11.87□□□□□ -0.51
TOP3B-211ENST00000449704 K7EMT4 169 aa11.87□□□□□ -0.51
TOP3B-211ENST00000449704 IL5P05113 134 aa11.87□□□□□ -0.51
TOP3B-211ENST00000449704 C8orf88P0DMB2 117 aa11.87□□□□□ -0.51
TOP3B-211ENST00000449704 CD69Q07108 199 aa11.87□□□□□ -0.51
TOP3B-211ENST00000449704 TIGITQ495A1 244 aa11.87□□□□□ -0.51
TOP3B-211ENST00000449704 SPANXN5Q5MJ07 72 aa11.87□□□□□ -0.51
TOP3B-211ENST00000449704 TOMM20LQ6UXN7 152 aa11.87□□□□□ -0.51
TOP3B-211ENST00000449704 NPIPB3Q92617 1050 aa11.87□□□□□ -0.51
TOP3B-211ENST00000449704 ZNF414Q96IQ9 312 aa11.87□□□□□ -0.51
TOP3B-211ENST00000449704 PUS1Q9Y606 427 aaKnown RBP eCLIP11.87□□□□□ -0.51
TOP3B-211ENST00000449704 TRAV30A0A087WSZ9 112 aa11.86□□□□□ -0.51
TOP3B-211ENST00000449704 IGHV3-49A0A0A0MS15 119 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms