RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 MPC2O95563 127 aa10.5□□□□□ -0.73
PDLIM2-213ENST00000448520 IGHV3-11P01762 117 aa10.5□□□□□ -0.73
PDLIM2-213ENST00000448520 TRGV3P03979 118 aa10.5□□□□□ -0.73
PDLIM2-213ENST00000448520 CRYGCP07315 174 aa10.5□□□□□ -0.73
PDLIM2-213ENST00000448520 ERHP84090 104 aaKnown RBP10.5□□□□□ -0.73
PDLIM2-213ENST00000448520 SLC24A4Q8NFF2 622 aa10.5□□□□□ -0.73
PDLIM2-213ENST00000448520 ST6GAL2Q96JF0 529 aa10.5□□□□□ -0.73
PDLIM2-213ENST00000448520 TMEM68Q96MH6 324 aa10.5□□□□□ -0.73
PDLIM2-213ENST00000448520 FANCD2OSQ96PS1 177 aa10.5□□□□□ -0.73
PDLIM2-213ENST00000448520 SRSF8Q9BRL6 282 aaKnown RBP10.5□□□□□ -0.73
PDLIM2-213ENST00000448520 RNF126Q9BV68 326 aa10.5□□□□□ -0.73
PDLIM2-213ENST00000448520 PSENENQ9NZ42 101 aa10.5□□□□□ -0.73
PDLIM2-213ENST00000448520 PAIP2BQ9ULR5 123 aaKnown RBP10.5□□□□□ -0.73
PDLIM2-213ENST00000448520 F11RQ9Y624 299 aaKnown RBP10.5□□□□□ -0.73
PDLIM2-213ENST00000448520 IGHV3-21A0A0B4J1V1 117 aa10.49□□□□□ -0.73
PDLIM2-213ENST00000448520 FAM24AA6NFZ4 105 aa10.49□□□□□ -0.73
PDLIM2-213ENST00000448520 INS-IGF2F8WCM5 200 aa10.49□□□□□ -0.73
PDLIM2-213ENST00000448520 OR2J3O76001 311 aa10.49□□□□□ -0.73
PDLIM2-213ENST00000448520 IFNA10P01566 189 aa10.49□□□□□ -0.73
PDLIM2-213ENST00000448520 IGLV1-51P01701 117 aa10.49□□□□□ -0.73
PDLIM2-213ENST00000448520 RAP2BP61225 183 aa10.49□□□□□ -0.73
PDLIM2-213ENST00000448520 CYCSP99999 105 aaKnown RBP10.49□□□□□ -0.73
PDLIM2-213ENST00000448520 BSXQ3C1V8 233 aa10.49□□□□□ -0.73
PDLIM2-213ENST00000448520 SPANXN5Q5MJ07 72 aa10.49□□□□□ -0.73
PDLIM2-213ENST00000448520 SLC25A24Q6NUK1 477 aa10.49□□□□□ -0.73
PDLIM2-213ENST00000448520 Q8N1Y9 231 aa10.49□□□□□ -0.73
PDLIM2-213ENST00000448520 OR2T35Q8NGX2 323 aa10.49□□□□□ -0.73
PDLIM2-213ENST00000448520 TM2D3Q9BRN9 247 aa10.49□□□□□ -0.73
PDLIM2-213ENST00000448520 HIPK2Q9H2X6 1198 aa10.49□□□□□ -0.73
PDLIM2-213ENST00000448520 MBD2Q9UBB5 411 aa10.49□□□□□ -0.73
PDLIM2-213ENST00000448520 IGLV11-55A0A075B6I3 123 aa10.48□□□□□ -0.73
PDLIM2-213ENST00000448520 L7N2F9 121 aa10.48□□□□□ -0.73
PDLIM2-213ENST00000448520 DEDDO75618 318 aa10.48□□□□□ -0.73
PDLIM2-213ENST00000448520 NDUFB8O95169 186 aa10.48□□□□□ -0.73
PDLIM2-213ENST00000448520 IGHV3-48P01763 117 aa10.48□□□□□ -0.73
PDLIM2-213ENST00000448520 IGHV4-30-4P0DP06 118 aa10.48□□□□□ -0.73
PDLIM2-213ENST00000448520 DEFA4P12838 97 aa10.48□□□□□ -0.73
PDLIM2-213ENST00000448520 NPY1RP25929 384 aa10.48□□□□□ -0.73
PDLIM2-213ENST00000448520 SNCAP37840 140 aa10.48□□□□□ -0.73
PDLIM2-213ENST00000448520 VAMP2P63027 116 aa10.48□□□□□ -0.73
PDLIM2-213ENST00000448520 MLANAQ16655 118 aa10.48□□□□□ -0.73
PDLIM2-213ENST00000448520 HSD17B13Q7Z5P4 300 aaPredicted RBP10.48□□□□□ -0.73
PDLIM2-213ENST00000448520 ZNF114Q8NC26 417 aa10.48□□□□□ -0.73
PDLIM2-213ENST00000448520 MISP3Q96FF7 219 aa10.48□□□□□ -0.73
PDLIM2-213ENST00000448520 SMIM8Q96KF7 97 aa10.48□□□□□ -0.73
PDLIM2-213ENST00000448520 RAB40CQ96S21 281 aa10.48□□□□□ -0.73
PDLIM2-213ENST00000448520 C19orf73Q9NVV2 129 aa10.48□□□□□ -0.73
PDLIM2-213ENST00000448520 IGSF23A1L1A6 192 aa10.47□□□□□ -0.73
PDLIM2-213ENST00000448520 BRI3O95415 125 aa10.47□□□□□ -0.73
PDLIM2-213ENST00000448520 IGHV3-23P01764 117 aa10.47□□□□□ -0.73
PDLIM2-213ENST00000448520 RHOGP84095 191 aa10.47□□□□□ -0.73
PDLIM2-213ENST00000448520 KLF5Q13887 457 aaPredicted RBP10.47□□□□□ -0.73
PDLIM2-213ENST00000448520 HAPLN4Q86UW8 402 aa10.47□□□□□ -0.73
PDLIM2-213ENST00000448520 OR1P1Q8NH06 330 aa10.47□□□□□ -0.73
PDLIM2-213ENST00000448520 PINX1Q96BK5 328 aaKnown RBP10.47□□□□□ -0.73
PDLIM2-213ENST00000448520 CIB3Q96Q77 187 aaPredicted RBP10.47□□□□□ -0.73
PDLIM2-213ENST00000448520 CACFD1Q9UGQ2 172 aa10.47□□□□□ -0.73
PDLIM2-213ENST00000448520 FBXL7Q9UJT9 491 aa10.47□□□□□ -0.73
PDLIM2-213ENST00000448520 MFSD2BA6NFX1 497 aa10.46□□□□□ -0.73
PDLIM2-213ENST00000448520 METTL15P1P0C7V9 234 aa10.46□□□□□ -0.73
PDLIM2-213ENST00000448520 HTR2BP41595 481 aa10.46□□□□□ -0.73
PDLIM2-213ENST00000448520 CAV2P51636 162 aa10.46□□□□□ -0.73
PDLIM2-213ENST00000448520 ARL16Q0P5N6 197 aa10.46□□□□□ -0.73
PDLIM2-213ENST00000448520 C2orf83Q53S99 150 aa10.46□□□□□ -0.73
PDLIM2-213ENST00000448520 PRSS54Q6PEW0 395 aa10.46□□□□□ -0.73
PDLIM2-213ENST00000448520 AKAP14Q86UN6 197 aa10.46□□□□□ -0.73
PDLIM2-213ENST00000448520 BSCL2Q96G97 398 aaPredicted RBP10.46□□□□□ -0.73
PDLIM2-213ENST00000448520 FNDC4Q9H6D8 234 aaPredicted RBP10.46□□□□□ -0.73
PDLIM2-213ENST00000448520 MRPL36Q9P0J6 103 aaKnown RBP10.46□□□□□ -0.73
PDLIM2-213ENST00000448520 STRAPQ9Y3F4 350 aaKnown RBP10.46□□□□□ -0.73
PDLIM2-213ENST00000448520 DYNC2H1Q8NCM8 4307 aaKnown RBP10.45□□□□□ -0.74
PDLIM2-213ENST00000448520 TRBV9A0A0B4J1U6 114 aa10.45□□□□□ -0.74
PDLIM2-213ENST00000448520 LCE6AA0A183 80 aa10.45□□□□□ -0.74
PDLIM2-213ENST00000448520 PMS2P5A8MQ11 134 aa10.45□□□□□ -0.74
PDLIM2-213ENST00000448520 K7EIM0 57 aa10.45□□□□□ -0.74
PDLIM2-213ENST00000448520 TSC22D2O75157 780 aa10.45□□□□□ -0.74
PDLIM2-213ENST00000448520 CST7O76096 145 aa10.45□□□□□ -0.74
PDLIM2-213ENST00000448520 IFNA4P05014 189 aa10.45□□□□□ -0.74
PDLIM2-213ENST00000448520 PVALBP20472 110 aaPredicted RBP10.45□□□□□ -0.74
PDLIM2-213ENST00000448520 PVRIGQ6DKI7 326 aa10.45□□□□□ -0.74
PDLIM2-213ENST00000448520 TMEM14EPQ6UXP3 125 aa10.45□□□□□ -0.74
PDLIM2-213ENST00000448520 TMEM252Q8N6L7 170 aa10.45□□□□□ -0.74
PDLIM2-213ENST00000448520 OR9G4Q8NGQ1 327 aa10.45□□□□□ -0.74
PDLIM2-213ENST00000448520 THAP6Q8TBB0 222 aa10.45□□□□□ -0.74
PDLIM2-213ENST00000448520 USMG5Q96IX5 58 aa10.45□□□□□ -0.74
PDLIM2-213ENST00000448520 SIGLEC8Q9NYZ4 499 aa10.45□□□□□ -0.74
PDLIM2-213ENST00000448520 U3KQ87 197 aa10.45□□□□□ -0.74
PDLIM2-213ENST00000448520 FXYD6-FXYD2A0A087WZ82 144 aa10.44□□□□□ -0.74
PDLIM2-213ENST00000448520 ANKRD34BA5PLL1 514 aa10.44□□□□□ -0.74
PDLIM2-213ENST00000448520 E5RGE8 158 aa10.44□□□□□ -0.74
PDLIM2-213ENST00000448520 I3L2K1 104 aa10.44□□□□□ -0.74
PDLIM2-213ENST00000448520 MT-CO2P00403 227 aa10.44□□□□□ -0.74
PDLIM2-213ENST00000448520 RLN2P04090 185 aa10.44□□□□□ -0.74
PDLIM2-213ENST00000448520 SUB1P53999 127 aaKnown RBP eCLIP10.44□□□□□ -0.74
PDLIM2-213ENST00000448520 TAS2R30P59541 319 aa10.44□□□□□ -0.74
PDLIM2-213ENST00000448520 KLK9Q2XQG4 91 aa10.44□□□□□ -0.74
PDLIM2-213ENST00000448520 C15orf32Q32M92 178 aa10.44□□□□□ -0.74
PDLIM2-213ENST00000448520 OR8G2PQ6IF36 304 aa10.44□□□□□ -0.74
PDLIM2-213ENST00000448520 ZNF343Q6P1L6 599 aa10.44□□□□□ -0.74
PDLIM2-213ENST00000448520 OR11H4Q8NGC9 324 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms