RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 TAS2R30P59541 319 aa13.56□□□□□ -0.24
HLCS-205ENST00000448340 SAMD5Q5TGI4 173 aa13.56□□□□□ -0.24
HLCS-205ENST00000448340 MED28Q9H204 178 aa13.56□□□□□ -0.24
HLCS-205ENST00000448340 FNDC4Q9H6D8 234 aaPredicted RBP13.56□□□□□ -0.24
HLCS-205ENST00000448340 PSENENQ9NZ42 101 aa13.56□□□□□ -0.24
HLCS-205ENST00000448340 STRAPQ9Y3F4 350 aaKnown RBP13.56□□□□□ -0.24
HLCS-205ENST00000448340 RYR3Q15413 4870 aa13.56□□□□□ -0.24
HLCS-205ENST00000448340 PPP5D1E7EU14 171 aa13.55□□□□□ -0.24
HLCS-205ENST00000448340 F8W735 103 aaPredicted RBP13.55□□□□□ -0.24
HLCS-205ENST00000448340 GGCTO75223 188 aaKnown RBP13.55□□□□□ -0.24
HLCS-205ENST00000448340 TMEM50AO95807 157 aa13.55□□□□□ -0.24
HLCS-205ENST00000448340 GPR183P32249 361 aa13.55□□□□□ -0.24
HLCS-205ENST00000448340 ARL3P36405 182 aa13.55□□□□□ -0.24
HLCS-205ENST00000448340 PAX9P55771 341 aa13.55□□□□□ -0.24
HLCS-205ENST00000448340 H2BFSP57053 126 aa13.55□□□□□ -0.24
HLCS-205ENST00000448340 Q56UQ5 140 aa13.55□□□□□ -0.24
HLCS-205ENST00000448340 SPANXN5Q5MJ07 72 aa13.55□□□□□ -0.24
HLCS-205ENST00000448340 ETFRF1Q6IPR1 90 aa13.55□□□□□ -0.24
HLCS-205ENST00000448340 BSCL2Q96G97 398 aaPredicted RBP13.55□□□□□ -0.24
HLCS-205ENST00000448340 LSM5Q9Y4Y9 91 aaKnown RBP13.55□□□□□ -0.24
HLCS-205ENST00000448340 TGOLN2O43493 480 aa13.54□□□□□ -0.24
HLCS-205ENST00000448340 TSC22D2O75157 780 aa13.54□□□□□ -0.24
HLCS-205ENST00000448340 IGHV3-48P01763 117 aa13.54□□□□□ -0.24
HLCS-205ENST00000448340 PRB2P02812 416 aaPredicted RBP13.54□□□□□ -0.24
HLCS-205ENST00000448340 SLC25A4P12235 298 aa13.54□□□□□ -0.24
HLCS-205ENST00000448340 NPBWR1P48145 328 aa13.54□□□□□ -0.24
HLCS-205ENST00000448340 RAB32Q13637 225 aa13.54□□□□□ -0.24
HLCS-205ENST00000448340 KLF5Q13887 457 aaPredicted RBP13.54□□□□□ -0.24
HLCS-205ENST00000448340 MLANAQ16655 118 aa13.54□□□□□ -0.24
HLCS-205ENST00000448340 RPEL1Q2QD12 228 aa13.54□□□□□ -0.24
HLCS-205ENST00000448340 ACSM6Q6P461 480 aa13.54□□□□□ -0.24
HLCS-205ENST00000448340 SPSB3Q6PJ21 355 aa13.54□□□□□ -0.24
HLCS-205ENST00000448340 UBAC2Q8NBM4 344 aa13.54□□□□□ -0.24
HLCS-205ENST00000448340 DCUN1D4Q92564 292 aa13.54□□□□□ -0.24
HLCS-205ENST00000448340 DLX4Q92988 240 aaPredicted RBP13.54□□□□□ -0.24
HLCS-205ENST00000448340 OR4C12Q96R67 309 aa13.54□□□□□ -0.24
HLCS-205ENST00000448340 DNAH3Q8TD57 4116 aa13.54□□□□□ -0.24
HLCS-205ENST00000448340 OR2T8A6NH00 312 aa13.53□□□□□ -0.24
HLCS-205ENST00000448340 H3BP45 60 aa13.53□□□□□ -0.24
HLCS-205ENST00000448340 L7N2F9 121 aa13.53□□□□□ -0.24
HLCS-205ENST00000448340 PVALBP20472 110 aaPredicted RBP13.53□□□□□ -0.24
HLCS-205ENST00000448340 GPX4P36969 197 aaPredicted RBP13.53□□□□□ -0.24
HLCS-205ENST00000448340 S100A10P60903 97 aa13.53□□□□□ -0.24
HLCS-205ENST00000448340 VAMP2P63027 116 aa13.53□□□□□ -0.24
HLCS-205ENST00000448340 CD69Q07108 199 aa13.53□□□□□ -0.24
HLCS-205ENST00000448340 OR4X1Q8NH49 305 aa13.53□□□□□ -0.24
HLCS-205ENST00000448340 CACNG8Q8WXS5 425 aa13.53□□□□□ -0.24
HLCS-205ENST00000448340 PAIP2BQ9ULR5 123 aaKnown RBP13.53□□□□□ -0.24
HLCS-205ENST00000448340 OVOL1O14753 267 aa13.52□□□□□ -0.25
HLCS-205ENST00000448340 GNG7O60262 68 aa13.52□□□□□ -0.25
HLCS-205ENST00000448340 OR2C1O95371 312 aa13.52□□□□□ -0.25
HLCS-205ENST00000448340 CTSGP08311 255 aa13.52□□□□□ -0.25
HLCS-205ENST00000448340 FCN2Q15485 313 aa13.52□□□□□ -0.25
HLCS-205ENST00000448340 TMEM14EPQ6UXP3 125 aa13.52□□□□□ -0.25
HLCS-205ENST00000448340 GPHB5Q86YW7 130 aa13.52□□□□□ -0.25
HLCS-205ENST00000448340 RCC1LQ96I51 464 aaKnown RBP13.52□□□□□ -0.25
HLCS-205ENST00000448340 MCRIP2Q9BUT9 160 aaKnown RBP13.52□□□□□ -0.25
HLCS-205ENST00000448340 C11orf1Q9H5F2 150 aa13.52□□□□□ -0.25
HLCS-205ENST00000448340 MRPL36Q9P0J6 103 aaKnown RBP13.52□□□□□ -0.25
HLCS-205ENST00000448340 NOTCH3Q9UM47 2321 aa13.52□□□□□ -0.25
HLCS-205ENST00000448340 NUPL2O15504 423 aaKnown RBP13.51□□□□□ -0.25
HLCS-205ENST00000448340 CLN5O75503 358 aa13.51□□□□□ -0.25
HLCS-205ENST00000448340 RLN2P04090 185 aa13.51□□□□□ -0.25
HLCS-205ENST00000448340 CXCL3P19876 107 aa13.51□□□□□ -0.25
HLCS-205ENST00000448340 ADMP35318 185 aa13.51□□□□□ -0.25
HLCS-205ENST00000448340 RRAS2P62070 204 aaPredicted RBP13.51□□□□□ -0.25
HLCS-205ENST00000448340 PRSS54Q6PEW0 395 aa13.51□□□□□ -0.25
HLCS-205ENST00000448340 SLC16A13Q7RTY0 426 aa13.51□□□□□ -0.25
HLCS-205ENST00000448340 TMEM116Q8NCL8 245 aa13.51□□□□□ -0.25
HLCS-205ENST00000448340 OR11H7Q8NGC8 314 aa13.51□□□□□ -0.25
HLCS-205ENST00000448340 CHRDL1Q9BU40 450 aa13.51□□□□□ -0.25
HLCS-205ENST00000448340 ZC4H2Q9NQZ6 224 aa13.51□□□□□ -0.25
HLCS-205ENST00000448340 PRSS46E5RG02 174 aa13.5□□□□□ -0.25
HLCS-205ENST00000448340 DEDDO75618 318 aa13.5□□□□□ -0.25
HLCS-205ENST00000448340 SYNJ2BPP57105 145 aa13.5□□□□□ -0.25
HLCS-205ENST00000448340 FAM106AQ4KMX7 169 aa13.5□□□□□ -0.25
HLCS-205ENST00000448340 REC114Q7Z4M0 266 aa13.5□□□□□ -0.25
HLCS-205ENST00000448340 PPP1R1CQ8WVI7 109 aa13.5□□□□□ -0.25
HLCS-205ENST00000448340 TRAV30A0A087WSZ9 112 aa13.49□□□□□ -0.25
HLCS-205ENST00000448340 PMS2P5A8MQ11 134 aa13.49□□□□□ -0.25
HLCS-205ENST00000448340 LGALS9O00182 355 aa13.49□□□□□ -0.25
HLCS-205ENST00000448340 SCGB2A1O75556 95 aa13.49□□□□□ -0.25
HLCS-205ENST00000448340 RND2P52198 227 aa13.49□□□□□ -0.25
HLCS-205ENST00000448340 RELQ04864 619 aaPredicted RBP13.49□□□□□ -0.25
HLCS-205ENST00000448340 LRRC37A5PQ49AS3 106 aa13.49□□□□□ -0.25
HLCS-205ENST00000448340 ASB13Q8WXK3 278 aa13.49□□□□□ -0.25
HLCS-205ENST00000448340 WDR89Q96FK6 387 aaPredicted RBP13.49□□□□□ -0.25
HLCS-205ENST00000448340 SLC35E1Q96K37 410 aa13.49□□□□□ -0.25
HLCS-205ENST00000448340 ZNF436Q9C0F3 470 aaPredicted RBP13.49□□□□□ -0.25
HLCS-205ENST00000448340 METTL15P1P0C7V9 234 aa13.48□□□□□ -0.25
HLCS-205ENST00000448340 PET100P0DJ07 73 aa13.48□□□□□ -0.25
HLCS-205ENST00000448340 IGLL1P15814 213 aa13.48□□□□□ -0.25
HLCS-205ENST00000448340 BCAP31P51572 246 aa13.48□□□□□ -0.25
HLCS-205ENST00000448340 CAV2P51636 162 aa13.48□□□□□ -0.25
HLCS-205ENST00000448340 GAMTQ14353 236 aa13.48□□□□□ -0.25
HLCS-205ENST00000448340 OR9G4Q8NGQ1 327 aa13.48□□□□□ -0.25
HLCS-205ENST00000448340 NPIPB3Q92617 1050 aa13.48□□□□□ -0.25
HLCS-205ENST00000448340 ACY3Q96HD9 319 aa13.48□□□□□ -0.25
HLCS-205ENST00000448340 GPR61Q9BZJ8 451 aa13.48□□□□□ -0.25
HLCS-205ENST00000448340 LYRM2Q9NU23 88 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms