RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 A0A1W2PRE2 83 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 PROB1E7EW31 1015 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 ATOX1O00244 68 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 OVOL1O14753 267 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 C1QAP02745 245 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 CCL26Q9Y258 94 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 SCTP09683 121 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 ACTL10Q5JWF8 245 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 GFI1BQ5VTD9 330 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 AMN1Q8IY45 258 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 PILRBQ9UKJ0 227 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 A0A1W2PPE3 182 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 EFNB1P98172 346 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 PVRIGQ6DKI7 326 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 NABP1Q96AH0 204 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 GP6Q9HCN6 339 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 C1orf194Q5T5A4 169 aa7.56□□□□□ -1.2
NIPBL-202ENST00000448238 BOD1L2Q8IYS8 172 aa7.56□□□□□ -1.2
NIPBL-202ENST00000448238 NWD2Q9ULI1 1742 aa7.56□□□□□ -1.2
NIPBL-202ENST00000448238 SCO2A0A1W2PP80 73 aa7.56□□□□□ -1.2
NIPBL-202ENST00000448238 H0Y8X5 98 aa7.56□□□□□ -1.2
NIPBL-202ENST00000448238 ZIC3O60481 467 aa7.56□□□□□ -1.2
NIPBL-202ENST00000448238 Q6ZS52 159 aa7.56□□□□□ -1.2
NIPBL-202ENST00000448238 SLC25A28Q96A46 364 aa7.56□□□□□ -1.2
NIPBL-202ENST00000448238 FBXL7Q9UJT9 491 aa7.56□□□□□ -1.2
NIPBL-202ENST00000448238 PATE4P0C8F1 98 aa7.56□□□□□ -1.2
NIPBL-202ENST00000448238 FOXA2Q9Y261 457 aaPredicted RBP7.56□□□□□ -1.2
NIPBL-202ENST00000448238 RIMS1Q86UR5 1692 aaKnown RBP7.56□□□□□ -1.2
NIPBL-202ENST00000448238 PLA2G10O15496 165 aa7.56□□□□□ -1.2
NIPBL-202ENST00000448238 DRD3P35462 400 aa7.56□□□□□ -1.2
NIPBL-202ENST00000448238 SLAQ13239 276 aa7.56□□□□□ -1.2
NIPBL-202ENST00000448238 SCARF2Q96GP6 870 aaPredicted RBP7.56□□□□□ -1.2
NIPBL-202ENST00000448238 FIZ1Q96SL8 496 aa7.56□□□□□ -1.2
NIPBL-202ENST00000448238 ZNF71Q9NQZ8 489 aaPredicted RBP7.56□□□□□ -1.2
NIPBL-202ENST00000448238 TMEM243Q9BU79 118 aa7.56□□□□□ -1.2
NIPBL-202ENST00000448238 DTX4Q9Y2E6 619 aa7.56□□□□□ -1.2
NIPBL-202ENST00000448238 CCL19Q99731 98 aa7.56□□□□□ -1.2
NIPBL-202ENST00000448238 C14orf132Q9NPU4 83 aa7.56□□□□□ -1.2
NIPBL-202ENST00000448238 TAF1P21675 1872 aa7.56□□□□□ -1.2
NIPBL-202ENST00000448238 A0A1B0GX51 115 aa7.56□□□□□ -1.2
NIPBL-202ENST00000448238 ZXDCQ2QGD7 858 aaPredicted RBP7.56□□□□□ -1.2
NIPBL-202ENST00000448238 TSKUQ8WUA8 353 aa7.56□□□□□ -1.2
NIPBL-202ENST00000448238 PTPN13Q12923 2485 aa7.55□□□□□ -1.2
NIPBL-202ENST00000448238 RMI2Q96E14 147 aa7.55□□□□□ -1.2
NIPBL-202ENST00000448238 RNF115Q9Y4L5 304 aa7.55□□□□□ -1.2
NIPBL-202ENST00000448238 C15orf61A6NNL5 157 aa7.55□□□□□ -1.2
NIPBL-202ENST00000448238 SLURP2P0DP57 97 aa7.55□□□□□ -1.2
NIPBL-202ENST00000448238 LY6EQ16553 131 aa7.55□□□□□ -1.2
NIPBL-202ENST00000448238 RASL10BQ96S79 203 aa7.55□□□□□ -1.2
NIPBL-202ENST00000448238 KLHDC3Q9BQ90 382 aa7.55□□□□□ -1.2
NIPBL-202ENST00000448238 DPM3Q9P2X0 92 aa7.55□□□□□ -1.2
NIPBL-202ENST00000448238 HCFC1P51610 2035 aa7.55□□□□□ -1.2
NIPBL-202ENST00000448238 CCDC168Q8NDH2 2452 aa7.55□□□□□ -1.2
NIPBL-202ENST00000448238 PSG1P11464 419 aa7.55□□□□□ -1.2
NIPBL-202ENST00000448238 TAL2Q16559 108 aa7.55□□□□□ -1.2
NIPBL-202ENST00000448238 NRN1LQ496H8 165 aa7.55□□□□□ -1.2
NIPBL-202ENST00000448238 C1orf210Q8IVY1 113 aa7.55□□□□□ -1.2
NIPBL-202ENST00000448238 FOXD3Q9UJU5 478 aaPredicted RBP7.55□□□□□ -1.2
NIPBL-202ENST00000448238 WFDC11Q8NEX6 87 aa7.55□□□□□ -1.2
NIPBL-202ENST00000448238 PROP1O75360 226 aa7.55□□□□□ -1.2
NIPBL-202ENST00000448238 CRLF1O75462 422 aa7.55□□□□□ -1.2
NIPBL-202ENST00000448238 UPK3AO75631 287 aa7.55□□□□□ -1.2
NIPBL-202ENST00000448238 C17orf99Q6UX52 265 aa7.55□□□□□ -1.2
NIPBL-202ENST00000448238 OR11H6Q8NGC7 330 aa7.55□□□□□ -1.2
NIPBL-202ENST00000448238 ZNF703Q9H7S9 590 aaPredicted RBP7.55□□□□□ -1.2
NIPBL-202ENST00000448238 SPTY2D1-AS1A0A0U1RR47 76 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 TRAV12-1A0A0B4J245 112 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 FOXL1Q12952 345 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 ZNF721Q8TF20 911 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 METTL12A8MUP2 240 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 D6R8Y8 96 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 GAS1P54826 345 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 MUSTN1Q8IVN3 82 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 STPG4Q8N801 248 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 SMIM14Q96QK8 99 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 ZIC4Q8N9L1 334 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 SNED1Q8TER0 1413 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 TRBV5-4A0A0C4DH59 114 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 B9A039 149 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 HIST1H2BKO60814 126 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 HIST1H2BJP06899 126 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 HIST1H2BOP23527 126 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 HIST1H2BBP33778 126 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 HIST1H2BDP58876 126 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 HIST1H2BCP62807 126 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 HIST2H2BEQ16778 126 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.54□□□□□ -1.2
NIPBL-202ENST00000448238 PEAR1Q5VY43 1037 aaPredicted RBP7.54□□□□□ -1.2
NIPBL-202ENST00000448238 HIST1H2BHQ93079 126 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 HIST1H2BNQ99877 126 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 HIST1H2BMQ99879 126 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 SCN11AQ9UI33 1791 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 RNF222A6NCQ9 220 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 PRR33A8MZF0 331 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 DEFB103AP81534 67 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 CD300CQ08708 224 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 FAM104BQ5XKR9 115 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 RSPO2Q6UXX9 243 aaPredicted RBP7.54□□□□□ -1.2
NIPBL-202ENST00000448238 TPRX1Q8N7U7 411 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 KCNK17Q96T54 332 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms