RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 A0A1W2PN81 502 aa15.46■□□□□ 0.07
SDCBP-204ENST00000447182 H0YJW9 148 aa15.46■□□□□ 0.07
SDCBP-204ENST00000447182 C3orf79P0CE67 100 aa15.46■□□□□ 0.07
SDCBP-204ENST00000447182 SLAQ13239 276 aa15.46■□□□□ 0.07
SDCBP-204ENST00000447182 C18orf32Q8TCD1 76 aa15.46■□□□□ 0.07
SDCBP-204ENST00000447182 FAM168AQ92567 244 aa15.46■□□□□ 0.07
SDCBP-204ENST00000447182 RND1Q92730 232 aa15.46■□□□□ 0.07
SDCBP-204ENST00000447182 MRPL20Q9BYC9 149 aaKnown RBP15.46■□□□□ 0.07
SDCBP-204ENST00000447182 LOC400499M0QZD8 3231 aa15.46■□□□□ 0.07
SDCBP-204ENST00000447182 CA1P00915 261 aaPredicted RBP15.46■□□□□ 0.06
SDCBP-204ENST00000447182 COL5A1-AS1Q5SY13 56 aa15.46■□□□□ 0.06
SDCBP-204ENST00000447182 ZNF329Q86UD4 541 aa15.46■□□□□ 0.06
SDCBP-204ENST00000447182 GRAMD2BQ96HH9 432 aa15.46■□□□□ 0.06
SDCBP-204ENST00000447182 GAL3ST2Q9H3Q3 398 aa15.46■□□□□ 0.06
SDCBP-204ENST00000447182 ZNF355PQ9NSJ1 428 aa15.46■□□□□ 0.06
SDCBP-204ENST00000447182 UQCR10Q9UDW1 63 aa15.46■□□□□ 0.06
SDCBP-204ENST00000447182 DPRXA6NFQ7 191 aa15.45■□□□□ 0.06
SDCBP-204ENST00000447182 COX7A2P2O60397 106 aa15.45■□□□□ 0.06
SDCBP-204ENST00000447182 IGLC2P0DOY2 106 aa15.45■□□□□ 0.06
SDCBP-204ENST00000447182 IGLC3P0DOY3 106 aa15.45■□□□□ 0.06
SDCBP-204ENST00000447182 NHLRC2Q8NBF2 726 aa15.45■□□□□ 0.06
SDCBP-204ENST00000447182 OR4A5Q8NH83 315 aa15.45■□□□□ 0.06
SDCBP-204ENST00000447182 SNRNP40Q96DI7 357 aaKnown RBP15.45■□□□□ 0.06
SDCBP-204ENST00000447182 LINC00479Q96M42 142 aa15.45■□□□□ 0.06
SDCBP-204ENST00000447182 PAXXQ9BUH6 204 aa15.45■□□□□ 0.06
SDCBP-204ENST00000447182 ASCL3Q9NQ33 180 aa15.45■□□□□ 0.06
SDCBP-204ENST00000447182 PEX7O00628 323 aa15.44■□□□□ 0.06
SDCBP-204ENST00000447182 LINC00614P0C842 121 aa15.44■□□□□ 0.06
SDCBP-204ENST00000447182 MEF2CQ06413 473 aaPredicted RBP15.44■□□□□ 0.06
SDCBP-204ENST00000447182 C10orf113Q5VZT2 155 aa15.44■□□□□ 0.06
SDCBP-204ENST00000447182 DEFB123Q8N688 67 aa15.44■□□□□ 0.06
SDCBP-204ENST00000447182 TMEM167AQ8TBQ9 72 aa15.44■□□□□ 0.06
SDCBP-204ENST00000447182 CHRDL1Q9BU40 450 aa15.44■□□□□ 0.06
SDCBP-204ENST00000447182 ZNF430Q9H8G1 570 aaPredicted RBP15.44■□□□□ 0.06
SDCBP-204ENST00000447182 DYSFO75923 2080 aa15.44■□□□□ 0.06
SDCBP-204ENST00000447182 TCRBV4S1A1TA0A5B7 111 aa15.44■□□□□ 0.06
SDCBP-204ENST00000447182 E7EUB6 86 aa15.44■□□□□ 0.06
SDCBP-204ENST00000447182 FSTL3O95633 263 aa15.44■□□□□ 0.06
SDCBP-204ENST00000447182 CHRNB4P30926 498 aa15.44■□□□□ 0.06
SDCBP-204ENST00000447182 BPIFB3P59826 476 aa15.44■□□□□ 0.06
SDCBP-204ENST00000447182 TBR1Q16650 682 aa15.44■□□□□ 0.06
SDCBP-204ENST00000447182 PATE2Q6UY27 113 aa15.44■□□□□ 0.06
SDCBP-204ENST00000447182 THAP8Q8NA92 274 aa15.44■□□□□ 0.06
SDCBP-204ENST00000447182 FAM215AQ9Y5M1 114 aa15.44■□□□□ 0.06
SDCBP-204ENST00000447182 CEACAM4O75871 244 aa15.43■□□□□ 0.06
SDCBP-204ENST00000447182 NPSP0C0P6 89 aa15.43■□□□□ 0.06
SDCBP-204ENST00000447182 PYYP10082 97 aa15.43■□□□□ 0.06
SDCBP-204ENST00000447182 SSBP2P81877 361 aaPredicted RBP15.43■□□□□ 0.06
SDCBP-204ENST00000447182 KLF5Q13887 457 aaPredicted RBP15.43■□□□□ 0.06
SDCBP-204ENST00000447182 SPACA3Q8IXA5 215 aa15.43■□□□□ 0.06
SDCBP-204ENST00000447182 NUP35Q8NFH5 326 aa15.43■□□□□ 0.06
SDCBP-204ENST00000447182 NUDT10Q8NFP7 164 aa15.43■□□□□ 0.06
SDCBP-204ENST00000447182 VSTM2AQ8TAG5 236 aa15.43■□□□□ 0.06
SDCBP-204ENST00000447182 BORCS7Q96B45 105 aa15.43■□□□□ 0.06
SDCBP-204ENST00000447182 FLYWCH2Q96CP2 140 aaKnown RBP15.43■□□□□ 0.06
SDCBP-204ENST00000447182 NUDT11Q96G61 164 aa15.43■□□□□ 0.06
SDCBP-204ENST00000447182 SSBP3Q9BWW4 388 aaPredicted RBP15.43■□□□□ 0.06
SDCBP-204ENST00000447182 FNDC4Q9H6D8 234 aaPredicted RBP15.43■□□□□ 0.06
SDCBP-204ENST00000447182 PPP1R14DQ9NXH3 145 aa15.43■□□□□ 0.06
SDCBP-204ENST00000447182 SVILO95425 2214 aa15.43■□□□□ 0.06
SDCBP-204ENST00000447182 HYPMO75409 117 aa15.43■□□□□ 0.06
SDCBP-204ENST00000447182 BTF3P20290 206 aaKnown RBP15.43■□□□□ 0.06
SDCBP-204ENST00000447182 BATFQ16520 125 aa15.43■□□□□ 0.06
SDCBP-204ENST00000447182 FAM19A2Q8N3H0 131 aa15.43■□□□□ 0.06
SDCBP-204ENST00000447182 FXYD5Q96DB9 178 aa15.43■□□□□ 0.06
SDCBP-204ENST00000447182 PLCE1Q9P212 2302 aa15.42■□□□□ 0.06
SDCBP-204ENST00000447182 IGKV1D-37A0A075B6S9 117 aa15.42■□□□□ 0.06
SDCBP-204ENST00000447182 NKX6-3A6NJ46 265 aa15.42■□□□□ 0.06
SDCBP-204ENST00000447182 CGB1A6NKQ9 187 aa15.42■□□□□ 0.06
SDCBP-204ENST00000447182 OR2J3O76001 311 aa15.42■□□□□ 0.06
SDCBP-204ENST00000447182 MYCNOSP40205 109 aa15.42■□□□□ 0.06
SDCBP-204ENST00000447182 SUB1P53999 127 aaKnown RBP eCLIP15.42■□□□□ 0.062e-6■■■■□ 20.8
SDCBP-204ENST00000447182 MFAP2P55001 183 aa15.42■□□□□ 0.06
SDCBP-204ENST00000447182 WT1-ASQ06250 92 aa15.42■□□□□ 0.06
SDCBP-204ENST00000447182 FAM71F2Q6NXP2 309 aa15.42■□□□□ 0.06
SDCBP-204ENST00000447182 KLHDC1Q8N7A1 406 aa15.42■□□□□ 0.06
SDCBP-204ENST00000447182 OR4C13Q8NGP0 309 aa15.42■□□□□ 0.06
SDCBP-204ENST00000447182 C7orf69Q9H7B7 122 aa15.42■□□□□ 0.06
SDCBP-204ENST00000447182 DCAF16Q9NXF7 216 aa15.42■□□□□ 0.06
SDCBP-204ENST00000447182 ICE1Q9Y2F5 2266 aa15.41■□□□□ 0.06
SDCBP-204ENST00000447182 NPIPB3Q92617 1050 aa15.41■□□□□ 0.06
SDCBP-204ENST00000447182 SMIM12Q96EX1 92 aa15.41■□□□□ 0.06
SDCBP-204ENST00000447182 PMCHL1Q16048 86 aa15.41■□□□□ 0.06
SDCBP-204ENST00000447182 DEFB109BQ30KR1 87 aa15.41■□□□□ 0.06
SDCBP-204ENST00000447182 GDF5OSQ5U4N7 250 aa15.41■□□□□ 0.06
SDCBP-204ENST00000447182 ATP5L2Q7Z4Y8 100 aa15.41■□□□□ 0.06
SDCBP-204ENST00000447182 PDPNQ86YL7 162 aa15.41■□□□□ 0.06
SDCBP-204ENST00000447182 ZADH2Q8N4Q0 377 aa15.41■□□□□ 0.06
SDCBP-204ENST00000447182 SAP30LQ9HAJ7 183 aa15.41■□□□□ 0.06
SDCBP-204ENST00000447182 ZFP30Q9Y2G7 519 aa15.41■□□□□ 0.06
SDCBP-204ENST00000447182 HIST1H1EP10412 219 aaKnown RBP15.4■□□□□ 0.06
SDCBP-204ENST00000447182 CD40P25942 277 aa15.4■□□□□ 0.06
SDCBP-204ENST00000447182 MMDQ15546 238 aa15.4■□□□□ 0.06
SDCBP-204ENST00000447182 PIP4P1Q86T03 277 aa15.4■□□□□ 0.06
SDCBP-204ENST00000447182 RPRMLQ8N4K4 120 aa15.4■□□□□ 0.06
SDCBP-204ENST00000447182 NUP37Q8NFH4 326 aa15.4■□□□□ 0.06
SDCBP-204ENST00000447182 TRAV34A0A0B4J273 112 aa15.4■□□□□ 0.06
SDCBP-204ENST00000447182 NTF3P20783 257 aa15.4■□□□□ 0.06
SDCBP-204ENST00000447182 C1orf185Q5T7R7 199 aa15.4■□□□□ 0.06
SDCBP-204ENST00000447182 ZNF596Q8TC21 504 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms