RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 SRSF8Q9BRL6 282 aaKnown RBP4.3□□□□□ -1.72
SCN11A-202ENST00000444237 TRIP12Q14669 1992 aaPredicted RBP4.3□□□□□ -1.72
SCN11A-202ENST00000444237 NUPR1O60356 82 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 CCL2P13500 99 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 KIAA0100Q14667 2235 aaKnown RBP4.3□□□□□ -1.72
SCN11A-202ENST00000444237 IGKV1-8A0A0C4DH67 115 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 C9JAW5 83 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 MS4A18H0YCH9 400 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 H0YJW9 148 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 HRKO00198 91 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 MGPP08493 103 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 MYF5P13349 255 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 VDAC2P45880 294 aaPredicted RBP4.3□□□□□ -1.72
SCN11A-202ENST00000444237 KLF5Q13887 457 aaPredicted RBP4.3□□□□□ -1.72
SCN11A-202ENST00000444237 MS4A18Q3C1V0 323 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 GOLT1AQ6ZVE7 132 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 ZIC4Q8N9L1 334 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 SCRT2Q9NQ03 307 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 THSD7BQ9C0I4 1608 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 IGHV3-64DA0A0J9YX35 117 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 PPP1R17O96001 155 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 ZNF726P1Q15940 193 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 YRDCQ86U90 279 aaKnown RBP4.3□□□□□ -1.72
SCN11A-202ENST00000444237 WFDC3Q8IUB2 231 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 CEND1Q8N111 149 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 TMEM52Q8NDY8 209 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 SARAFQ96BY9 339 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 TM4SF19Q96DZ7 209 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 RCHY1Q96PM5 261 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 GFRA4Q9GZZ7 299 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 CTSBP07858 339 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 PAX1P15863 534 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 PTGDSP41222 190 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 RAC3P60763 192 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 LILRA6Q6PI73 481 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 FOXI2Q6ZQN5 318 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 PPP1R32Q7Z5V6 425 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 CT55Q8WUE5 264 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 RAB1BQ9H0U4 201 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 CXXC4Q9H2H0 198 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 DEPPQ9NTK1 212 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 V9GYV3 84 aa4.3□□□□□ -1.72
SCN11A-202ENST00000444237 IGKV1D-13A0A0B4J2D9 117 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 PRSS29PA6NIE9 313 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 FAM90A9PA6NNJ1 464 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 IGKV1-13P0DP09 117 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 LGALS7P47929 136 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 VKORC1Q9BQB6 163 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 LIME1Q9H400 295 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 PSG8Q9UQ74 426 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 LOC102723996A0A087X1L8 192 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 TMEM170BQ5T4T1 132 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 DYNLRB1Q9NP97 96 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 SMIM27A0A1W2PRY6 76 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 LINC01549A6NIU2 74 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 OR2H2O95918 312 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 PLAUP00749 431 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 FOXI1Q12951 378 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 PRSS8Q16651 343 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 SPATA46Q5T0L3 261 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 ZC2HC1BQ5TFG8 222 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 SH2D6Q7Z4S9 175 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 C15orf53Q8NAA6 179 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 hCG_38984A0A1B0GV85 526 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 C4orf51C9J302 202 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 F2Z2F3 143 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 PATE4P0C8F1 98 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 RRN3P1Q2M238 152 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 CT83Q5H943 113 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 LINC00305Q7Z4B0 112 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 WIPF2Q8TF74 440 aaPredicted RBP4.29□□□□□ -1.72
SCN11A-202ENST00000444237 CACNG8Q8WXS5 425 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 NRTNQ99748 197 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 PLA2G2EQ9NZK7 142 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 CHD3Q12873 2000 aaKnown RBP4.29□□□□□ -1.72
SCN11A-202ENST00000444237 DOCK3Q8IZD9 2030 aa4.29□□□□□ -1.72
SCN11A-202ENST00000444237 IGKV1-9A0A0C4DH69 117 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 ETV2O00321 342 aaPredicted RBP4.28□□□□□ -1.72
SCN11A-202ENST00000444237 GATA2P23769 480 aaPredicted RBP4.28□□□□□ -1.72
SCN11A-202ENST00000444237 PEBP1P30086 187 aaKnown RBP4.28□□□□□ -1.72
SCN11A-202ENST00000444237 PRDX2P32119 198 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 DLX6P56179 175 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 RNPS1Q15287 305 aaKnown RBP4.28□□□□□ -1.72
SCN11A-202ENST00000444237 TREML4Q6UXN2 200 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 VKORC1L1Q8N0U8 176 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 CCL4L1Q8NHW4 92 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 PATE1Q8WXA2 126 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 KLK15Q9H2R5 256 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 IFI27L2Q9H2X8 130 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 EFEMP2O95967 443 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 CD27P26842 260 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 SPACA3Q8IXA5 215 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 CNEP1R1Q8N9A8 125 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 FAM110AQ9BQ89 295 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 JPT1Q9UK76 154 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 LILRA5A6NI73 299 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 NPIPB5A8MRT5 1133 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 CCL7P80098 99 aa4.28□□□□□ -1.72
SCN11A-202ENST00000444237 SRSF1Q07955 248 aaKnown RBP eCLIP4.28□□□□□ -1.72
SCN11A-202ENST00000444237 ANXA2RQ3ZCQ2 193 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms