RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 IGHV7-4-1A0A0J9YVY3 117 aa14.07□□□□□ -0.16
ATPAF2-201ENST00000444058 YIF1AO95070 293 aa14.07□□□□□ -0.16
ATPAF2-201ENST00000444058 IGHV3-48P01763 117 aa14.07□□□□□ -0.16
ATPAF2-201ENST00000444058 ANXA3P12429 323 aa14.07□□□□□ -0.16
ATPAF2-201ENST00000444058 ZNF79Q15937 498 aa14.07□□□□□ -0.16
ATPAF2-201ENST00000444058 FAM110AQ9BQ89 295 aa14.07□□□□□ -0.16
ATPAF2-201ENST00000444058 GINS3Q9BRX5 216 aa14.07□□□□□ -0.16
ATPAF2-201ENST00000444058 SHPKQ9UHJ6 478 aa14.07□□□□□ -0.16
ATPAF2-201ENST00000444058 IGHV3OR16-8A0A075B7F1 116 aa14.06□□□□□ -0.16
ATPAF2-201ENST00000444058 TRAV14DV4A0A0A6YYC5 116 aa14.06□□□□□ -0.16
ATPAF2-201ENST00000444058 OR4C46A6NHA9 309 aa14.06□□□□□ -0.16
ATPAF2-201ENST00000444058 TMEM50AO95807 157 aa14.06□□□□□ -0.16
ATPAF2-201ENST00000444058 CD5P06127 495 aa14.06□□□□□ -0.16
ATPAF2-201ENST00000444058 AKR1C4P17516 323 aa14.06□□□□□ -0.16
ATPAF2-201ENST00000444058 SUPT4H1P63272 117 aaKnown RBP14.06□□□□□ -0.16
ATPAF2-201ENST00000444058 NMSQ5H8A3 153 aa14.06□□□□□ -0.16
ATPAF2-201ENST00000444058 ZNF600Q6ZNG1 722 aa14.06□□□□□ -0.16
ATPAF2-201ENST00000444058 TMEM116Q8NCL8 245 aa14.06□□□□□ -0.16
ATPAF2-201ENST00000444058 OR4X1Q8NH49 305 aa14.06□□□□□ -0.16
ATPAF2-201ENST00000444058 SLC25A21Q9BQT8 299 aaPredicted RBP14.06□□□□□ -0.16
ATPAF2-201ENST00000444058 RHPN1-AS1Q9BWJ2 59 aa14.06□□□□□ -0.16
ATPAF2-201ENST00000444058 CHEK1O14757 476 aa14.05□□□□□ -0.16
ATPAF2-201ENST00000444058 CLN5O75503 358 aa14.05□□□□□ -0.16
ATPAF2-201ENST00000444058 SCGB2A1O75556 95 aa14.05□□□□□ -0.16
ATPAF2-201ENST00000444058 SULT1A3P0DMM9 295 aa14.05□□□□□ -0.16
ATPAF2-201ENST00000444058 SULT1A4P0DMN0 295 aa14.05□□□□□ -0.16
ATPAF2-201ENST00000444058 BMI1P35226 326 aa14.05□□□□□ -0.16
ATPAF2-201ENST00000444058 OPRK1P41145 380 aa14.05□□□□□ -0.16
ATPAF2-201ENST00000444058 CCR6P51684 374 aa14.05□□□□□ -0.16
ATPAF2-201ENST00000444058 C2orf83Q53S99 150 aa14.05□□□□□ -0.16
ATPAF2-201ENST00000444058 TMEM128Q5BJH2 165 aa14.05□□□□□ -0.16
ATPAF2-201ENST00000444058 SPANXN2Q5MJ10 180 aa14.05□□□□□ -0.16
ATPAF2-201ENST00000444058 TOMM20LQ6UXN7 152 aa14.05□□□□□ -0.16
ATPAF2-201ENST00000444058 LGI3Q8N145 548 aa14.05□□□□□ -0.16
ATPAF2-201ENST00000444058 RNASEH2CQ8TDP1 164 aaKnown RBP14.05□□□□□ -0.16
ATPAF2-201ENST00000444058 FNDC4Q9H6D8 234 aaPredicted RBP14.05□□□□□ -0.16
ATPAF2-201ENST00000444058 HEYLQ9NQ87 328 aaPredicted RBP14.05□□□□□ -0.16
ATPAF2-201ENST00000444058 NBEAL2Q6ZNJ1 2754 aa14.05□□□□□ -0.16
ATPAF2-201ENST00000444058 RPS10-NUDT3A0A1W2PQS6 291 aa14.04□□□□□ -0.16
ATPAF2-201ENST00000444058 ZNF207O43670 478 aaKnown RBP14.04□□□□□ -0.16
ATPAF2-201ENST00000444058 CASC10Q5T4H9 136 aa14.04□□□□□ -0.16
ATPAF2-201ENST00000444058 NOXA1Q86UR1 476 aa14.04□□□□□ -0.16
ATPAF2-201ENST00000444058 SLC24A4Q8NFF2 622 aa14.04□□□□□ -0.16
ATPAF2-201ENST00000444058 RNF2Q99496 336 aa14.04□□□□□ -0.16
ATPAF2-201ENST00000444058 GGTLC1Q9BX51 225 aa14.04□□□□□ -0.16
ATPAF2-201ENST00000444058 TRAV30A0A087WSZ9 112 aa14.03□□□□□ -0.16
ATPAF2-201ENST00000444058 LOC102724200A0A096LPH7 203 aaPredicted RBP14.03□□□□□ -0.16
ATPAF2-201ENST00000444058 DUXBA0A1W2PPF3 345 aa14.03□□□□□ -0.16
ATPAF2-201ENST00000444058 CEBPZOSA8MTT3 80 aa14.03□□□□□ -0.16
ATPAF2-201ENST00000444058 LYL1P12980 280 aa14.03□□□□□ -0.16
ATPAF2-201ENST00000444058 PUS1Q9Y606 427 aaKnown RBP eCLIP14.03□□□□□ -0.16
ATPAF2-201ENST00000444058 SLC25A4P12235 298 aa14.02□□□□□ -0.17
ATPAF2-201ENST00000444058 CMC4P56277 68 aaPredicted RBP14.02□□□□□ -0.17
ATPAF2-201ENST00000444058 ATP5IP56385 69 aaPredicted RBP14.02□□□□□ -0.17
ATPAF2-201ENST00000444058 TNFRSF9Q07011 255 aa14.02□□□□□ -0.17
ATPAF2-201ENST00000444058 SMCO1Q147U7 214 aa14.02□□□□□ -0.17
ATPAF2-201ENST00000444058 FAM90A2PQ658T7 463 aa14.02□□□□□ -0.17
ATPAF2-201ENST00000444058 LYZL2Q7Z4W2 148 aa14.02□□□□□ -0.17
ATPAF2-201ENST00000444058 LRTM2Q8N967 370 aa14.02□□□□□ -0.17
ATPAF2-201ENST00000444058 VSIRQ9H7M9 311 aa14.02□□□□□ -0.17
ATPAF2-201ENST00000444058 ZFAND3Q9H8U3 227 aa14.02□□□□□ -0.17
ATPAF2-201ENST00000444058 HSPB7Q9UBY9 170 aa14.02□□□□□ -0.17
ATPAF2-201ENST00000444058 A0A1B0GU03 582 aa14.01□□□□□ -0.17
ATPAF2-201ENST00000444058 MLANAQ16655 118 aa14.01□□□□□ -0.17
ATPAF2-201ENST00000444058 ODF3L2Q3SX64 289 aa14.01□□□□□ -0.17
ATPAF2-201ENST00000444058 ETFRF1Q6IPR1 90 aa14.01□□□□□ -0.17
ATPAF2-201ENST00000444058 SRRQ9GZT4 340 aa14.01□□□□□ -0.17
ATPAF2-201ENST00000444058 PRR13Q9NZ81 148 aa14.01□□□□□ -0.17
ATPAF2-201ENST00000444058 MRPL36Q9P0J6 103 aaKnown RBP14.01□□□□□ -0.17
ATPAF2-201ENST00000444058 U3KQ87 197 aa14.01□□□□□ -0.17
ATPAF2-201ENST00000444058 IGKV1-17P01599 117 aa14□□□□□ -0.17
ATPAF2-201ENST00000444058 PRSS54Q6PEW0 395 aa14□□□□□ -0.17
ATPAF2-201ENST00000444058 TMED4Q7Z7H5 227 aa14□□□□□ -0.17
ATPAF2-201ENST00000444058 TMEM170AQ8WVE7 144 aa14□□□□□ -0.17
ATPAF2-201ENST00000444058 TMEM231Q9H6L2 316 aa14□□□□□ -0.17
ATPAF2-201ENST00000444058 A0A1W2PS18 150 aa13.99□□□□□ -0.17
ATPAF2-201ENST00000444058 SLC25A6P12236 298 aa13.99□□□□□ -0.17
ATPAF2-201ENST00000444058 NPPCP23582 126 aa13.99□□□□□ -0.17
ATPAF2-201ENST00000444058 NPY1RP25929 384 aa13.99□□□□□ -0.17
ATPAF2-201ENST00000444058 APOC4P55056 127 aa13.99□□□□□ -0.17
ATPAF2-201ENST00000444058 PAFAH1B2P68402 229 aa13.99□□□□□ -0.17
ATPAF2-201ENST00000444058 RETNQ9HD89 108 aa13.99□□□□□ -0.17
ATPAF2-201ENST00000444058 NDUFA13Q9P0J0 144 aa13.99□□□□□ -0.17
ATPAF2-201ENST00000444058 DNAH7Q8WXX0 4024 aa13.99□□□□□ -0.17
ATPAF2-201ENST00000444058 IGHV3-49A0A0A0MS15 119 aa13.98□□□□□ -0.17
ATPAF2-201ENST00000444058 KIR2DL5BA0A0G2JN68 375 aa13.98□□□□□ -0.17
ATPAF2-201ENST00000444058 KIR2DL5BA0A0G2JPC4 375 aa13.98□□□□□ -0.17
ATPAF2-201ENST00000444058 NAP1L6A6NFF2 107 aa13.98□□□□□ -0.17
ATPAF2-201ENST00000444058 UBE2CO00762 179 aa13.98□□□□□ -0.17
ATPAF2-201ENST00000444058 PITX3O75364 302 aa13.98□□□□□ -0.17
ATPAF2-201ENST00000444058 UBE2MP61081 183 aaKnown RBP13.98□□□□□ -0.17
ATPAF2-201ENST00000444058 YPEL3P61236 119 aaPredicted RBP13.98□□□□□ -0.17
ATPAF2-201ENST00000444058 RBMS2Q15434 407 aaKnown RBP13.98□□□□□ -0.17
ATPAF2-201ENST00000444058 KIR2DL5AQ8N109 375 aa13.98□□□□□ -0.17
ATPAF2-201ENST00000444058 OR1S2Q8NGQ3 325 aa13.98□□□□□ -0.17
ATPAF2-201ENST00000444058 KIR2DL5BQ8NHK3 375 aa13.98□□□□□ -0.17
ATPAF2-201ENST00000444058 IL17DQ8TAD2 202 aa13.98□□□□□ -0.17
ATPAF2-201ENST00000444058 DTD1Q8TEA8 209 aa13.98□□□□□ -0.17
ATPAF2-201ENST00000444058 ST8SIA2Q92186 375 aa13.98□□□□□ -0.17
ATPAF2-201ENST00000444058 METTL26Q96S19 204 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms