RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 PUS1Q9Y606 427 aaKnown RBP eCLIP12□□□□□ -0.49
CTDSP1-204ENST00000443891 ALMS1Q8TCU4 4167 aa12□□□□□ -0.49
CTDSP1-204ENST00000443891 CCDC160A6NGH7 325 aa11.99□□□□□ -0.49
CTDSP1-204ENST00000443891 CLN5O75503 358 aa11.99□□□□□ -0.49
CTDSP1-204ENST00000443891 RNASE2P10153 161 aaKnown RBP11.99□□□□□ -0.49
CTDSP1-204ENST00000443891 TFPI2P48307 235 aa11.99□□□□□ -0.49
CTDSP1-204ENST00000443891 SURF2Q15527 256 aaPredicted RBP11.99□□□□□ -0.49
CTDSP1-204ENST00000443891 TRIM16LQ309B1 348 aa11.99□□□□□ -0.49
CTDSP1-204ENST00000443891 PHLDA1Q8WV24 401 aaPredicted RBP11.99□□□□□ -0.49
CTDSP1-204ENST00000443891 ST8SIA2Q92186 375 aa11.99□□□□□ -0.49
CTDSP1-204ENST00000443891 NARS2Q96I59 477 aaKnown RBP11.99□□□□□ -0.49
CTDSP1-204ENST00000443891 MS4A6AQ9H2W1 248 aa11.99□□□□□ -0.49
CTDSP1-204ENST00000443891 RABL2AQ9UBK7 228 aaPredicted RBP11.99□□□□□ -0.49
CTDSP1-204ENST00000443891 RABL2BQ9UNT1 228 aa11.99□□□□□ -0.49
CTDSP1-204ENST00000443891 IGHV3-49A0A0A0MS15 119 aa11.98□□□□□ -0.49
CTDSP1-204ENST00000443891 RPS10-NUDT3A0A1W2PQS6 291 aa11.98□□□□□ -0.49
CTDSP1-204ENST00000443891 GABARAPH6UMI1 98 aa11.98□□□□□ -0.49
CTDSP1-204ENST00000443891 IGHV3-48P01763 117 aa11.98□□□□□ -0.49
CTDSP1-204ENST00000443891 PI3P19957 117 aa11.98□□□□□ -0.49
CTDSP1-204ENST00000443891 HOXA1P49639 335 aaPredicted RBP11.98□□□□□ -0.49
CTDSP1-204ENST00000443891 TCTAP57738 103 aa11.98□□□□□ -0.49
CTDSP1-204ENST00000443891 SPCS3P61009 180 aa11.98□□□□□ -0.49
CTDSP1-204ENST00000443891 MEF2DQ14814 521 aa11.98□□□□□ -0.49
CTDSP1-204ENST00000443891 BSXQ3C1V8 233 aa11.98□□□□□ -0.49
CTDSP1-204ENST00000443891 LGALS9CQ6DKI2 356 aa11.98□□□□□ -0.49
CTDSP1-204ENST00000443891 GBGT1Q8N5D6 347 aa11.98□□□□□ -0.49
CTDSP1-204ENST00000443891 GRAMD2BQ96HH9 432 aa11.98□□□□□ -0.49
CTDSP1-204ENST00000443891 METTL26Q96S19 204 aa11.98□□□□□ -0.49
CTDSP1-204ENST00000443891 ABHD1Q96SE0 405 aa11.98□□□□□ -0.49
CTDSP1-204ENST00000443891 IGKV3-7A0A075B6H7 116 aa11.97□□□□□ -0.49
CTDSP1-204ENST00000443891 CDS2O95674 445 aa11.97□□□□□ -0.49
CTDSP1-204ENST00000443891 RAB3DO95716 219 aa11.97□□□□□ -0.49
CTDSP1-204ENST00000443891 CRYBB3P26998 211 aa11.97□□□□□ -0.49
CTDSP1-204ENST00000443891 OPRK1P41145 380 aa11.97□□□□□ -0.49
CTDSP1-204ENST00000443891 HTR2BP41595 481 aa11.97□□□□□ -0.49
CTDSP1-204ENST00000443891 EIF2B2P49770 351 aaKnown RBP11.97□□□□□ -0.49
CTDSP1-204ENST00000443891 IL18Q14116 193 aa11.97□□□□□ -0.49
CTDSP1-204ENST00000443891 TMEM187Q14656 261 aa11.97□□□□□ -0.49
CTDSP1-204ENST00000443891 SPCS2Q15005 226 aa11.97□□□□□ -0.49
CTDSP1-204ENST00000443891 IZUMO4Q1ZYL8 232 aa11.97□□□□□ -0.49
CTDSP1-204ENST00000443891 STEAP1BQ6NZ63 245 aa11.97□□□□□ -0.49
CTDSP1-204ENST00000443891 OR11H2Q8NH07 326 aa11.97□□□□□ -0.49
CTDSP1-204ENST00000443891 RNASE11Q8TAA1 199 aaKnown RBP11.97□□□□□ -0.49
CTDSP1-204ENST00000443891 TMEM222Q9H0R3 208 aa11.97□□□□□ -0.49
CTDSP1-204ENST00000443891 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.97□□□□□ -0.49
CTDSP1-204ENST00000443891 HYDINQ4G0P3 5121 aa11.97□□□□□ -0.49
CTDSP1-204ENST00000443891 IGHV3OR16-13A0A075B7E8 117 aa11.96□□□□□ -0.49
CTDSP1-204ENST00000443891 IGHV3-74A0A0B4J1X5 117 aa11.96□□□□□ -0.49
CTDSP1-204ENST00000443891 A0A1B0GU03 582 aa11.96□□□□□ -0.49
CTDSP1-204ENST00000443891 CA1P00915 261 aaPredicted RBP11.96□□□□□ -0.49
CTDSP1-204ENST00000443891 IFNA4P05014 189 aa11.96□□□□□ -0.49
CTDSP1-204ENST00000443891 ETV6P41212 452 aa11.96□□□□□ -0.49
CTDSP1-204ENST00000443891 PPP5CP53041 499 aa11.96□□□□□ -0.49
CTDSP1-204ENST00000443891 DEFB131AP59861 70 aa11.96□□□□□ -0.49
CTDSP1-204ENST00000443891 RPL11P62913 178 aaKnown RBP11.96□□□□□ -0.49
CTDSP1-204ENST00000443891 DHODHQ02127 395 aa11.96□□□□□ -0.49
CTDSP1-204ENST00000443891 SPINK9Q5DT21 86 aa11.96□□□□□ -0.49
CTDSP1-204ENST00000443891 OR13C8Q8NGS7 320 aa11.96□□□□□ -0.49
CTDSP1-204ENST00000443891 C11orf45Q8TAV5 145 aa11.96□□□□□ -0.49
CTDSP1-204ENST00000443891 DIRAS2Q96HU8 199 aa11.96□□□□□ -0.49
CTDSP1-204ENST00000443891 C14orf166Q9Y224 244 aaKnown RBP11.96□□□□□ -0.49
CTDSP1-204ENST00000443891 APOHP02749 345 aaPredicted RBP11.95□□□□□ -0.5
CTDSP1-204ENST00000443891 SPP1P10451 314 aa11.95□□□□□ -0.5
CTDSP1-204ENST00000443891 SLC25A4P12235 298 aa11.95□□□□□ -0.5
CTDSP1-204ENST00000443891 RBMS2Q15434 407 aaKnown RBP11.95□□□□□ -0.5
CTDSP1-204ENST00000443891 ZNF124Q15973 351 aa11.95□□□□□ -0.5
CTDSP1-204ENST00000443891 SCGB2B2Q4G0G5 96 aa11.95□□□□□ -0.5
CTDSP1-204ENST00000443891 MORN3Q6PF18 240 aaPredicted RBP11.95□□□□□ -0.5
CTDSP1-204ENST00000443891 NOXA1Q86UR1 476 aa11.95□□□□□ -0.5
CTDSP1-204ENST00000443891 STHQ8IWL8 128 aa11.95□□□□□ -0.5
CTDSP1-204ENST00000443891 LILRB2Q8N423 598 aa11.95□□□□□ -0.5
CTDSP1-204ENST00000443891 RNASEH2CQ8TDP1 164 aaKnown RBP11.95□□□□□ -0.5
CTDSP1-204ENST00000443891 RBPMSQ93062 196 aaKnown RBP11.95□□□□□ -0.5
CTDSP1-204ENST00000443891 TMEM230Q96A57 120 aa11.95□□□□□ -0.5
CTDSP1-204ENST00000443891 FNDC4Q9H6D8 234 aaPredicted RBP11.95□□□□□ -0.5
CTDSP1-204ENST00000443891 CCDC59Q9P031 241 aaKnown RBP11.95□□□□□ -0.5
CTDSP1-204ENST00000443891 TEX13DA0A0J9YY54 714 aaPredicted RBP11.94□□□□□ -0.5
CTDSP1-204ENST00000443891 DISC1C4P0D8 188 aa11.94□□□□□ -0.5
CTDSP1-204ENST00000443891 K7EQG2 157 aa11.94□□□□□ -0.5
CTDSP1-204ENST00000443891 CTDSP2O14595 271 aa11.94□□□□□ -0.5
CTDSP1-204ENST00000443891 AP2S1P53680 142 aaPredicted RBP11.94□□□□□ -0.5
CTDSP1-204ENST00000443891 SP6Q3SY56 376 aa11.94□□□□□ -0.5
CTDSP1-204ENST00000443891 C2orf83Q53S99 150 aa11.94□□□□□ -0.5
CTDSP1-204ENST00000443891 ETFRF1Q6IPR1 90 aa11.94□□□□□ -0.5
CTDSP1-204ENST00000443891 OR4D10Q8NGI6 311 aa11.94□□□□□ -0.5
CTDSP1-204ENST00000443891 OR1S2Q8NGQ3 325 aa11.94□□□□□ -0.5
CTDSP1-204ENST00000443891 MARCH1Q8TCQ1 289 aa11.94□□□□□ -0.5
CTDSP1-204ENST00000443891 GLYATL2Q8WU03 294 aa11.94□□□□□ -0.5
CTDSP1-204ENST00000443891 HRH4Q9H3N8 390 aa11.94□□□□□ -0.5
CTDSP1-204ENST00000443891 RABAC1Q9UI14 185 aa11.94□□□□□ -0.5
CTDSP1-204ENST00000443891 A0A0G2JRQ6 117 aa11.93□□□□□ -0.5
CTDSP1-204ENST00000443891 HELTA6NFD8 242 aa11.93□□□□□ -0.5
CTDSP1-204ENST00000443891 C11orf94C9JXX5 98 aa11.93□□□□□ -0.5
CTDSP1-204ENST00000443891 CTDSPLO15194 276 aa11.93□□□□□ -0.5
CTDSP1-204ENST00000443891 IGKV1-17P01599 117 aa11.93□□□□□ -0.5
CTDSP1-204ENST00000443891 P2RY1P47900 373 aa11.93□□□□□ -0.5
CTDSP1-204ENST00000443891 YPEL3P61236 119 aaPredicted RBP11.93□□□□□ -0.5
CTDSP1-204ENST00000443891 NAA60Q9H7X0 242 aa11.93□□□□□ -0.5
CTDSP1-204ENST00000443891 SEPSECSQ9HD40 501 aaKnown RBP11.93□□□□□ -0.5
CTDSP1-204ENST00000443891 RSL24D1Q9UHA3 163 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms