RNA–Protein interactions for RNA: ENST00000443206.2

TOM1-208, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-208ENST00000443206 SUPT4H1P63272 117 aaKnown RBP9.85□□□□□ -0.83
TOM1-208ENST00000443206 HAGHQ16775 308 aa9.85□□□□□ -0.83
TOM1-208ENST00000443206 TRIQKQ629K1 86 aa9.85□□□□□ -0.83
TOM1-208ENST00000443206 PVRIGQ6DKI7 326 aa9.85□□□□□ -0.83
TOM1-208ENST00000443206 LYZL2Q7Z4W2 148 aa9.85□□□□□ -0.83
TOM1-208ENST00000443206 SPAG8Q99932 426 aaPredicted RBP9.85□□□□□ -0.83
TOM1-208ENST00000443206 SPATA25Q9BR10 227 aa9.85□□□□□ -0.83
TOM1-208ENST00000443206 SRRQ9GZT4 340 aa9.85□□□□□ -0.83
TOM1-208ENST00000443206 SRD5A3Q9H8P0 318 aa9.85□□□□□ -0.83
TOM1-208ENST00000443206 PRR13Q9NZ81 148 aa9.85□□□□□ -0.83
TOM1-208ENST00000443206 NBEAL2Q6ZNJ1 2754 aa9.84□□□□□ -0.83
TOM1-208ENST00000443206 TRAV14DV4A0A0A6YYC5 116 aa9.84□□□□□ -0.83
TOM1-208ENST00000443206 RPS10-NUDT3A0A1W2PQS6 291 aa9.84□□□□□ -0.83
TOM1-208ENST00000443206 NXPH3O95157 252 aa9.84□□□□□ -0.83
TOM1-208ENST00000443206 TMEM50AO95807 157 aa9.84□□□□□ -0.83
TOM1-208ENST00000443206 VAMP1P23763 118 aa9.84□□□□□ -0.83
TOM1-208ENST00000443206 CCR6P51684 374 aa9.84□□□□□ -0.83
TOM1-208ENST00000443206 SMCO1Q147U7 214 aa9.84□□□□□ -0.83
TOM1-208ENST00000443206 BSXQ3C1V8 233 aa9.84□□□□□ -0.83
TOM1-208ENST00000443206 ZNF600Q6ZNG1 722 aa9.84□□□□□ -0.83
TOM1-208ENST00000443206 NOXA1Q86UR1 476 aa9.84□□□□□ -0.83
TOM1-208ENST00000443206 TMEM116Q8NCL8 245 aa9.84□□□□□ -0.83
TOM1-208ENST00000443206 OR10C1Q96KK4 312 aa9.84□□□□□ -0.83
TOM1-208ENST00000443206 GINS3Q9BRX5 216 aa9.84□□□□□ -0.83
TOM1-208ENST00000443206 SMPXQ9UHP9 88 aa9.84□□□□□ -0.83
TOM1-208ENST00000443206 IGHV7-4-1A0A0J9YVY3 117 aa9.83□□□□□ -0.84
TOM1-208ENST00000443206 DUXBA0A1W2PPF3 345 aa9.83□□□□□ -0.84
TOM1-208ENST00000443206 NAP1L6A6NFF2 107 aa9.83□□□□□ -0.84
TOM1-208ENST00000443206 TSPAN4O14817 238 aa9.83□□□□□ -0.84
TOM1-208ENST00000443206 CLN5O75503 358 aa9.83□□□□□ -0.84
TOM1-208ENST00000443206 BMI1P35226 326 aa9.83□□□□□ -0.84
TOM1-208ENST00000443206 TNFRSF9Q07011 255 aa9.83□□□□□ -0.84
TOM1-208ENST00000443206 RBMS2Q15434 407 aaKnown RBP9.83□□□□□ -0.84
TOM1-208ENST00000443206 MLANAQ16655 118 aa9.83□□□□□ -0.84
TOM1-208ENST00000443206 C2orf83Q53S99 150 aa9.83□□□□□ -0.84
TOM1-208ENST00000443206 NMSQ5H8A3 153 aa9.83□□□□□ -0.84
TOM1-208ENST00000443206 LINC00322Q6ZN03 302 aaPredicted RBP9.83□□□□□ -0.84
TOM1-208ENST00000443206 CENPSQ8N2Z9 138 aa9.83□□□□□ -0.84
TOM1-208ENST00000443206 SLC24A4Q8NFF2 622 aa9.83□□□□□ -0.84
TOM1-208ENST00000443206 OR4X1Q8NH49 305 aa9.83□□□□□ -0.84
TOM1-208ENST00000443206 OR1S1Q8NH92 325 aa9.83□□□□□ -0.84
TOM1-208ENST00000443206 RNASEH2CQ8TDP1 164 aaKnown RBP9.83□□□□□ -0.84
TOM1-208ENST00000443206 RHPN1-AS1Q9BWJ2 59 aa9.83□□□□□ -0.84
TOM1-208ENST00000443206 WFDC10AQ9H1F0 79 aa9.83□□□□□ -0.84
TOM1-208ENST00000443206 FNDC4Q9H6D8 234 aaPredicted RBP9.83□□□□□ -0.84
TOM1-208ENST00000443206 HUWE1Q7Z6Z7 4374 aaKnown RBP9.82□□□□□ -0.84
TOM1-208ENST00000443206 TRAV30A0A087WSZ9 112 aa9.82□□□□□ -0.84
TOM1-208ENST00000443206 A0A1B0GU03 582 aa9.82□□□□□ -0.84
TOM1-208ENST00000443206 CENPXA8MT69 81 aa9.82□□□□□ -0.84
TOM1-208ENST00000443206 CHEK1O14757 476 aa9.82□□□□□ -0.84
TOM1-208ENST00000443206 IFNA10P01566 189 aa9.82□□□□□ -0.84
TOM1-208ENST00000443206 SLC25A4P12235 298 aa9.82□□□□□ -0.84
TOM1-208ENST00000443206 BAK1Q16611 211 aa9.82□□□□□ -0.84
TOM1-208ENST00000443206 ETFRF1Q6IPR1 90 aa9.82□□□□□ -0.84
TOM1-208ENST00000443206 TOMM20LQ6UXN7 152 aa9.82□□□□□ -0.84
TOM1-208ENST00000443206 HSPB7Q9UBY9 170 aa9.82□□□□□ -0.84
TOM1-208ENST00000443206 PUS1Q9Y606 427 aaKnown RBP eCLIP9.82□□□□□ -0.84
TOM1-208ENST00000443206 U3KQ87 197 aa9.82□□□□□ -0.84
TOM1-208ENST00000443206 IGHV3-49A0A0A0MS15 119 aa9.81□□□□□ -0.84
TOM1-208ENST00000443206 RBMY1BA6NDE4 496 aaKnown RBP9.81□□□□□ -0.84
TOM1-208ENST00000443206 RBMY1EA6NEQ0 496 aaKnown RBP9.81□□□□□ -0.84
TOM1-208ENST00000443206 OR4C46A6NHA9 309 aa9.81□□□□□ -0.84
TOM1-208ENST00000443206 SFT2D2O95562 160 aa9.81□□□□□ -0.84
TOM1-208ENST00000443206 CD5P06127 495 aa9.81□□□□□ -0.84
TOM1-208ENST00000443206 RBMY1DP0C7P1 496 aaKnown RBP9.81□□□□□ -0.84
TOM1-208ENST00000443206 NPY1RP25929 384 aa9.81□□□□□ -0.84
TOM1-208ENST00000443206 LRTM2Q8N967 370 aa9.81□□□□□ -0.84
TOM1-208ENST00000443206 DTD1Q8TEA8 209 aa9.81□□□□□ -0.84
TOM1-208ENST00000443206 ZNF414Q96IQ9 312 aa9.81□□□□□ -0.84
TOM1-208ENST00000443206 RNF2Q99496 336 aa9.81□□□□□ -0.84
TOM1-208ENST00000443206 IGHV3OR16-13A0A075B7E8 117 aa9.8□□□□□ -0.84
TOM1-208ENST00000443206 IGHV3-74A0A0B4J1X5 117 aa9.8□□□□□ -0.84
TOM1-208ENST00000443206 LINC00854A0A1B0GVQ3 168 aa9.8□□□□□ -0.84
TOM1-208ENST00000443206 C3orf84H3BNL1 204 aa9.8□□□□□ -0.84
TOM1-208ENST00000443206 NPPCP23582 126 aa9.8□□□□□ -0.84
TOM1-208ENST00000443206 ATP5IP56385 69 aaPredicted RBP9.8□□□□□ -0.84
TOM1-208ENST00000443206 UBE2MP61081 183 aaKnown RBP9.8□□□□□ -0.84
TOM1-208ENST00000443206 PAFAH1B2P68402 229 aa9.8□□□□□ -0.84
TOM1-208ENST00000443206 PPP1R1AQ13522 171 aa9.8□□□□□ -0.84
TOM1-208ENST00000443206 CITED4Q96RK1 184 aa9.8□□□□□ -0.84
TOM1-208ENST00000443206 RBKSQ9H477 322 aa9.8□□□□□ -0.84
TOM1-208ENST00000443206 MRPL36Q9P0J6 103 aaKnown RBP9.8□□□□□ -0.84
TOM1-208ENST00000443206 TMED3Q9Y3Q3 217 aa9.8□□□□□ -0.84
TOM1-208ENST00000443206 LOC102724200A0A096LPH7 203 aaPredicted RBP9.79□□□□□ -0.84
TOM1-208ENST00000443206 A0A1W2PS18 150 aa9.79□□□□□ -0.84
TOM1-208ENST00000443206 IFNA4P05014 189 aa9.79□□□□□ -0.84
TOM1-208ENST00000443206 SLC25A6P12236 298 aa9.79□□□□□ -0.84
TOM1-208ENST00000443206 RND2P52198 227 aa9.79□□□□□ -0.84
TOM1-208ENST00000443206 CMC4P56277 68 aaPredicted RBP9.79□□□□□ -0.84
TOM1-208ENST00000443206 PRSS54Q6PEW0 395 aa9.79□□□□□ -0.84
TOM1-208ENST00000443206 MUC7Q8TAX7 377 aa9.79□□□□□ -0.84
TOM1-208ENST00000443206 NARS2Q96I59 477 aaKnown RBP9.79□□□□□ -0.84
TOM1-208ENST00000443206 SDHCQ99643 169 aaPredicted RBP9.79□□□□□ -0.84
TOM1-208ENST00000443206 C7orf50Q9BRJ6 194 aaKnown RBP9.79□□□□□ -0.84
TOM1-208ENST00000443206 TMEM231Q9H6L2 316 aa9.79□□□□□ -0.84
TOM1-208ENST00000443206 ZFAND3Q9H8U3 227 aa9.79□□□□□ -0.84
TOM1-208ENST00000443206 UBQLN2Q9UHD9 624 aa9.79□□□□□ -0.84
TOM1-208ENST00000443206 IGKV3-7A0A075B6H7 116 aa9.78□□□□□ -0.84
TOM1-208ENST00000443206 FAM90A26D6RGX4 464 aa9.78□□□□□ -0.84
TOM1-208ENST00000443206 MED6O75586 246 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms