RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 DISC1C4P0D8 188 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 F8W735 103 aaPredicted RBP5.78□□□□□ -1.48
CD44-211ENST00000442151 I3L2K1 104 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 CHEK1O14757 476 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 HPGDSO60760 199 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 IFNA4P05014 189 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 RPL5P46777 297 aaKnown RBP5.78□□□□□ -1.48
CD44-211ENST00000442151 AP2S1P53680 142 aaPredicted RBP5.78□□□□□ -1.48
CD44-211ENST00000442151 PIGPP57054 158 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 VBP1P61758 197 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 PINX1Q96BK5 328 aaKnown RBP5.78□□□□□ -1.48
CD44-211ENST00000442151 CHRDL1Q9BU40 450 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.78□□□□□ -1.48
CD44-211ENST00000442151 EXTL2Q9UBQ6 330 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 MTFP1Q9UDX5 166 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 HUWE1Q7Z6Z7 4374 aaKnown RBP5.78□□□□□ -1.48
CD44-211ENST00000442151 IGHV3-21A0A0B4J1V1 117 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 GABARAPH6UMI1 98 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 ST8SIA3O43173 380 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 GABARAPO95166 117 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 RAB3DO95716 219 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 HTR2BP41595 481 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 HOXA1P49639 335 aaPredicted RBP5.78□□□□□ -1.48
CD44-211ENST00000442151 TCTAP57738 103 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 RPL11P62913 178 aaKnown RBP5.78□□□□□ -1.48
CD44-211ENST00000442151 SURF2Q15527 256 aaPredicted RBP5.78□□□□□ -1.48
CD44-211ENST00000442151 CEMP1Q6PRD7 247 aaPredicted RBP5.78□□□□□ -1.48
CD44-211ENST00000442151 OR52E5Q8NH55 327 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 TMEM230Q96A57 120 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 MRGPRFQ96AM1 343 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 METTL26Q96S19 204 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 ABHD1Q96SE0 405 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 WFDC10AQ9H1F0 79 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 MAP6D1Q9H9H5 199 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 UBQLN2Q9UHD9 624 aa5.78□□□□□ -1.48
CD44-211ENST00000442151 TEX13DA0A0J9YY54 714 aaPredicted RBP5.77□□□□□ -1.49
CD44-211ENST00000442151 TMEM50AO95807 157 aa5.77□□□□□ -1.49
CD44-211ENST00000442151 SLC25A4P12235 298 aa5.77□□□□□ -1.49
CD44-211ENST00000442151 EDN2P20800 178 aa5.77□□□□□ -1.49
CD44-211ENST00000442151 ATP5IP56385 69 aaPredicted RBP5.77□□□□□ -1.49
CD44-211ENST00000442151 SPCS3P61009 180 aa5.77□□□□□ -1.49
CD44-211ENST00000442151 NCS1P62166 190 aa5.77□□□□□ -1.49
CD44-211ENST00000442151 STEAP1BQ6NZ63 245 aa5.77□□□□□ -1.49
CD44-211ENST00000442151 TCF24Q7RTU0 167 aa5.77□□□□□ -1.49
CD44-211ENST00000442151 LYG2Q86SG7 212 aa5.77□□□□□ -1.49
CD44-211ENST00000442151 LHFPL1Q86WI0 220 aa5.77□□□□□ -1.49
CD44-211ENST00000442151 Q8WTZ3 238 aa5.77□□□□□ -1.49
CD44-211ENST00000442151 A0A0J9YWU9 116 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 HELTA6NFD8 242 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 RGS5O15539 181 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 ZNF207O43670 478 aaKnown RBP5.76□□□□□ -1.49
CD44-211ENST00000442151 GSTZ1O43708 216 aaPredicted RBP5.76□□□□□ -1.49
CD44-211ENST00000442151 NOL3O60936 208 aaKnown RBP5.76□□□□□ -1.49
CD44-211ENST00000442151 CD3DP04234 171 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 RPL35AP18077 110 aaKnown RBP5.76□□□□□ -1.49
CD44-211ENST00000442151 UCP1P25874 307 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 S100A7P31151 101 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 TGFBR1P36897 503 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 NUP62P37198 522 aaPredicted RBP5.76□□□□□ -1.49
CD44-211ENST00000442151 MFAP2P55001 183 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 SCGB2B2Q4G0G5 96 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 GPR107Q5VW38 600 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 MORN3Q6PF18 240 aaPredicted RBP5.76□□□□□ -1.49
CD44-211ENST00000442151 TOMM20LQ6UXN7 152 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 GPR141Q7Z602 305 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 STHQ8IWL8 128 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 OR4X1Q8NH49 305 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 RNASEH2CQ8TDP1 164 aaKnown RBP5.76□□□□□ -1.49
CD44-211ENST00000442151 RNF2Q99496 336 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 PRRT1Q99946 306 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 RARRES2Q99969 163 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 BCL7BQ9BQE9 202 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 MRPS26Q9BYN8 205 aaKnown RBP5.76□□□□□ -1.49
CD44-211ENST00000442151 M0QYG6 137 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 CTDSPLO15194 276 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 CLN5O75503 358 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 CD74P04233 296 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 FABP1P07148 127 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 ANXA3P12429 323 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 OPRK1P41145 380 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 TMEM187Q14656 261 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 DEFB135Q30KP9 77 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 ODF3L2Q3SX64 289 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 OR1S2Q8NGQ3 325 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 OR52I2Q8NH67 350 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 VSIRQ9H7M9 311 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 HEYLQ9NQ87 328 aaPredicted RBP5.76□□□□□ -1.49
CD44-211ENST00000442151 RSL24D1Q9UHA3 163 aaKnown RBP5.76□□□□□ -1.49
CD44-211ENST00000442151 SCP2D1Q9UJQ7 156 aa5.76□□□□□ -1.49
CD44-211ENST00000442151 PUS1Q9Y606 427 aaKnown RBP eCLIP5.76□□□□□ -1.49
CD44-211ENST00000442151 CDS2O95674 445 aa5.75□□□□□ -1.49
CD44-211ENST00000442151 IGKV1-39P01597 117 aa5.75□□□□□ -1.49
CD44-211ENST00000442151 IGKV1D-39P04432 117 aa5.75□□□□□ -1.49
CD44-211ENST00000442151 AKAIN1P0CW23 69 aa5.75□□□□□ -1.49
CD44-211ENST00000442151 SPP1P10451 314 aa5.75□□□□□ -1.49
CD44-211ENST00000442151 FAUP35544 74 aaKnown RBP5.75□□□□□ -1.49
CD44-211ENST00000442151 ETV6P41212 452 aa5.75□□□□□ -1.49
CD44-211ENST00000442151 TFPI2P48307 235 aa5.75□□□□□ -1.49
CD44-211ENST00000442151 FAM90A2PQ658T7 463 aa5.75□□□□□ -1.49
CD44-211ENST00000442151 PVRIGQ6DKI7 326 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms