RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 DMRTA2Q96SC8 542 aa5.63□□□□□ -1.51
USP46-201ENST00000441222 NBR2O15453 112 aa5.63□□□□□ -1.51
USP46-201ENST00000441222 PCOLCEQ15113 449 aa5.63□□□□□ -1.51
USP46-201ENST00000441222 OR9G4Q8NGQ1 327 aa5.63□□□□□ -1.51
USP46-201ENST00000441222 CTHRC1Q96CG8 243 aa5.63□□□□□ -1.51
USP46-201ENST00000441222 OVOL1O14753 267 aa5.63□□□□□ -1.51
USP46-201ENST00000441222 CLEC19AQ6UXS0 136 aa5.63□□□□□ -1.51
USP46-201ENST00000441222 HAPLN4Q86UW8 402 aa5.63□□□□□ -1.51
USP46-201ENST00000441222 SCO2A0A1W2PP80 73 aa5.63□□□□□ -1.51
USP46-201ENST00000441222 NDUFS8O00217 210 aa5.63□□□□□ -1.51
USP46-201ENST00000441222 IGFBP2P18065 325 aa5.63□□□□□ -1.51
USP46-201ENST00000441222 EFNB1P98172 346 aa5.63□□□□□ -1.51
USP46-201ENST00000441222 RNASE6Q93091 150 aaKnown RBP5.63□□□□□ -1.51
USP46-201ENST00000441222 C7orf69Q9H7B7 122 aa5.63□□□□□ -1.51
USP46-201ENST00000441222 ERG28Q9UKR5 140 aa5.63□□□□□ -1.51
USP46-201ENST00000441222 LOC102723996A0A087X1L8 192 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 TRAV14DV4A0A0A6YYC5 116 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 A0A1W2PRE2 83 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 MSGN1A6NI15 193 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 DSCR9P59020 149 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 RASL11AQ6T310 242 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 VKORC1Q9BQB6 163 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 CENPVL1A0A0U1RR11 272 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 IGHV3-48P01763 117 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 SLC25A45Q8N413 288 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 GTF3AQ92664 365 aaKnown RBP5.62□□□□□ -1.51
USP46-201ENST00000441222 IQCF6A8MYZ5 107 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 UPK2O00526 184 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 HTN3P15516 51 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 CT83Q5H943 113 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 ZNF562Q6V9R5 426 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 OR13A1Q8NGR1 328 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 C1QTNF5Q9BXJ0 243 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 SRXN1Q9BYN0 137 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 TNRC6AQ8NDV7 1962 aaKnown RBP5.62□□□□□ -1.51
USP46-201ENST00000441222 GFRA3O60609 400 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 TOMM40O96008 361 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 ZFAND6Q6FIF0 208 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 LAMTOR2Q9Y2Q5 125 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 C15orf61A6NNL5 157 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 IGHV4-39P01824 125 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 CELA2AP08217 269 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 CHTOPQ9Y3Y2 248 aaKnown RBP5.62□□□□□ -1.51
USP46-201ENST00000441222 C17orf100A8MU93 164 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 NTN1O95631 604 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 SRP19P09132 144 aaKnown RBP5.62□□□□□ -1.51
USP46-201ENST00000441222 IFITM2Q01629 132 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 FAM89BQ8N5H3 189 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 SPANXDQ9BXN6 97 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 LTBP4Q8N2S1 1624 aa5.62□□□□□ -1.51
USP46-201ENST00000441222 KLF4O43474 513 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 ZIC3O60481 467 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 IGKCP01834 107 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 CD28P10747 220 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 CEACAM1P13688 526 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 RPL39P5Q59GN2 51 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 RFLNBQ8N5W9 214 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 PLEKHB2Q96CS7 222 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 TRAV9-2A0A087WT02 112 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 A0A087WX48 190 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 IGHV3-35A0A0C4DH35 117 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 TCRBV4S1A1TA0A5B7 111 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 BSPH1Q075Z2 132 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 CDCP2Q5VXM1 449 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 FDCSPQ8NFU4 85 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 TRAV12-3A0A0B4J271 114 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 F8WEM9 126 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 H3BTX0 84 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 RHOGP84095 191 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 HSD52Q0P140 79 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 ABHD17AQ96GS6 310 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 REPIN1Q9BWE0 567 aaKnown RBP5.61□□□□□ -1.51
USP46-201ENST00000441222 MED12LQ86YW9 2145 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 TCF20Q9UGU0 1960 aaKnown RBP5.61□□□□□ -1.51
USP46-201ENST00000441222 ANAPC1Q9H1A4 1944 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 CECR9P0C854 216 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 HOXD3P31249 432 aaPredicted RBP5.61□□□□□ -1.51
USP46-201ENST00000441222 GAGE2BQ13066 116 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 GAGE2EQ4V326 116 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 C8orf46Q8TAG6 207 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 RNF125Q96EQ8 232 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 AMELYQ99218 206 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 NHP2Q9NX24 153 aaKnown RBP5.61□□□□□ -1.51
USP46-201ENST00000441222 GAGE2DQ9UEU5 116 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 EPDR1Q9UM22 224 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 LINC00271P0C7V0 271 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 EGR4Q05215 589 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 FUT5Q11128 374 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 LAGE3Q14657 143 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 MRPL20Q9BYC9 149 aaKnown RBP5.61□□□□□ -1.51
USP46-201ENST00000441222 NRN1Q9NPD7 142 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 C12orf77C9JDV5 145 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 GAGE13Q4V321 117 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 CREBBPQ92793 2442 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 LINC01590Q5TEZ4 76 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 TMEM170AQ8WVE7 144 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 C1QTNF4Q9BXJ3 329 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 CFHR5Q9BXR6 569 aa5.61□□□□□ -1.51
USP46-201ENST00000441222 SP9P0CG40 484 aa5.6□□□□□ -1.51
USP46-201ENST00000441222 LINC00158P58513 81 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms