RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 Q6ZT83 130 aa17.1■□□□□ 0.33
FMR1-208ENST00000440235 MRPL20Q9BYC9 149 aaKnown RBP17.1■□□□□ 0.33
FMR1-208ENST00000440235 THADAQ6YHU6 1953 aa17.1■□□□□ 0.33
FMR1-208ENST00000440235 MBD3L1Q8WWY6 194 aa17.1■□□□□ 0.33
FMR1-208ENST00000440235 PEX7O00628 323 aa17.09■□□□□ 0.33
FMR1-208ENST00000440235 FXYD7P58549 80 aa17.09■□□□□ 0.33
FMR1-208ENST00000440235 STARD6P59095 220 aa17.09■□□□□ 0.33
FMR1-208ENST00000440235 FABP2P12104 132 aa17.09■□□□□ 0.33
FMR1-208ENST00000440235 HOXB1P14653 301 aaPredicted RBP17.09■□□□□ 0.33
FMR1-208ENST00000440235 LHX2P50458 406 aa17.09■□□□□ 0.33
FMR1-208ENST00000440235 CDH23Q9H251 3354 aa17.09■□□□□ 0.33
FMR1-208ENST00000440235 DEFB104AQ8WTQ1 72 aa17.09■□□□□ 0.33
FMR1-208ENST00000440235 DNLZQ5SXM8 178 aa17.08■□□□□ 0.33
FMR1-208ENST00000440235 OR10AG1Q8NH19 301 aa17.08■□□□□ 0.33
FMR1-208ENST00000440235 ASCL2Q99929 193 aa17.08■□□□□ 0.33
FMR1-208ENST00000440235 IGHV3OR16-10A0A075B7F0 116 aa17.08■□□□□ 0.32
FMR1-208ENST00000440235 LINC00479Q96M42 142 aa17.08■□□□□ 0.32
FMR1-208ENST00000440235 TMEM160Q9NX00 188 aa17.08■□□□□ 0.32
FMR1-208ENST00000440235 WDR83OSQ9Y284 106 aa17.08■□□□□ 0.32
FMR1-208ENST00000440235 CHD9Q3L8U1 2897 aa17.08■□□□□ 0.32
FMR1-208ENST00000440235 FOXI3A8MTJ6 420 aaPredicted RBP17.08■□□□□ 0.32
FMR1-208ENST00000440235 TGFAP01135 160 aa17.08■□□□□ 0.32
FMR1-208ENST00000440235 PPIFP30405 207 aaKnown RBP17.08■□□□□ 0.32
FMR1-208ENST00000440235 CA7P43166 264 aa17.08■□□□□ 0.32
FMR1-208ENST00000440235 LDLRAD2Q5SZI1 272 aa17.08■□□□□ 0.32
FMR1-208ENST00000440235 SAA2-SAA4A0A096LPE2 208 aa17.07■□□□□ 0.32
FMR1-208ENST00000440235 F2RL2O00254 374 aa17.07■□□□□ 0.32
FMR1-208ENST00000440235 SAA2P0DJI9 122 aaPredicted RBP17.07■□□□□ 0.32
FMR1-208ENST00000440235 TMEM208Q9BTX3 173 aa17.07■□□□□ 0.32
FMR1-208ENST00000440235 ANKHD1Q8IWZ3 2542 aaKnown RBP17.07■□□□□ 0.32
FMR1-208ENST00000440235 TREML4Q6UXN2 200 aa17.07■□□□□ 0.32
FMR1-208ENST00000440235 M0R3E3 92 aa17.07■□□□□ 0.32
FMR1-208ENST00000440235 ZNF138P52744 262 aa17.07■□□□□ 0.32
FMR1-208ENST00000440235 ZNF146Q15072 292 aa17.07■□□□□ 0.32
FMR1-208ENST00000440235 ZNF497Q6ZNH5 498 aa17.07■□□□□ 0.32
FMR1-208ENST00000440235 HIST1H4GQ99525 98 aa17.07■□□□□ 0.32
FMR1-208ENST00000440235 LINC00470Q9BZP3 86 aa17.07■□□□□ 0.32
FMR1-208ENST00000440235 SEMA5BQ9P283 1151 aa17.07■□□□□ 0.32
FMR1-208ENST00000440235 DGAT2L7PQ6IED9 249 aa17.07■□□□□ 0.32
FMR1-208ENST00000440235 PNKDQ8N490 385 aa17.07■□□□□ 0.32
FMR1-208ENST00000440235 LYNX1G3V0Z9 82 aa17.06■□□□□ 0.32
FMR1-208ENST00000440235 IGKV3-20P01619 116 aa17.06■□□□□ 0.32
FMR1-208ENST00000440235 PRSS2P07478 247 aa17.06■□□□□ 0.32
FMR1-208ENST00000440235 LYNX1P0DP58 116 aa17.06■□□□□ 0.32
FMR1-208ENST00000440235 ABCA2Q9BZC7 2435 aa17.06■□□□□ 0.32
FMR1-208ENST00000440235 IGKV1-6A0A0C4DH72 117 aa17.06■□□□□ 0.32
FMR1-208ENST00000440235 WDR82Q6UXN9 313 aa17.06■□□□□ 0.32
FMR1-208ENST00000440235 GGNQ86UU5 652 aa17.06■□□□□ 0.32
FMR1-208ENST00000440235 OR52E5Q8NH55 327 aa17.06■□□□□ 0.32
FMR1-208ENST00000440235 RAB1BQ9H0U4 201 aa17.06■□□□□ 0.32
FMR1-208ENST00000440235 SAA1P0DJI8 122 aaPredicted RBP17.06■□□□□ 0.32
FMR1-208ENST00000440235 OR1N2Q8NGR9 330 aa17.06■□□□□ 0.32
FMR1-208ENST00000440235 ALKBH7Q9BT30 221 aaPredicted RBP17.06■□□□□ 0.32
FMR1-208ENST00000440235 C17orf82Q86X59 251 aaPredicted RBP17.05■□□□□ 0.32
FMR1-208ENST00000440235 C9orf106Q8NAJ2 232 aa17.05■□□□□ 0.32
FMR1-208ENST00000440235 PRR7Q8TB68 274 aa17.05■□□□□ 0.32
FMR1-208ENST00000440235 IFNL4K9M1U5 179 aa17.05■□□□□ 0.32
FMR1-208ENST00000440235 ZNF324O75467 553 aaPredicted RBP17.05■□□□□ 0.32
FMR1-208ENST00000440235 RELQ04864 619 aaPredicted RBP17.05■□□□□ 0.32
FMR1-208ENST00000440235 GGTLC1Q9BX51 225 aa17.05■□□□□ 0.32
FMR1-208ENST00000440235 MUC6Q6W4X9 2439 aa17.05■□□□□ 0.32
FMR1-208ENST00000440235 RPL13AP40429 203 aaKnown RBP17.05■□□□□ 0.32
FMR1-208ENST00000440235 SRSF4Q08170 494 aaKnown RBP17.05■□□□□ 0.32
FMR1-208ENST00000440235 DPF1Q92782 380 aa17.05■□□□□ 0.32
FMR1-208ENST00000440235 NACAE9PAV3 2078 aa17.05■□□□□ 0.32
FMR1-208ENST00000440235 LINC00473A8K010 186 aa17.04■□□□□ 0.32
FMR1-208ENST00000440235 DUTP33316 252 aaKnown RBP17.04■□□□□ 0.32
FMR1-208ENST00000440235 FNDC4Q9H6D8 234 aaPredicted RBP17.04■□□□□ 0.32
FMR1-208ENST00000440235 FOXA2Q9Y261 457 aaPredicted RBP17.04■□□□□ 0.32
FMR1-208ENST00000440235 TYMSP04818 313 aa17.04■□□□□ 0.32
FMR1-208ENST00000440235 MC5RP33032 325 aa17.04■□□□□ 0.32
FMR1-208ENST00000440235 Q5PR19 223 aa17.04■□□□□ 0.32
FMR1-208ENST00000440235 AGMATQ9BSE5 352 aa17.04■□□□□ 0.32
FMR1-208ENST00000440235 CCDC168Q8NDH2 2452 aa17.04■□□□□ 0.32
FMR1-208ENST00000440235 IGHV2OR16-5A0A0B4J2B6 119 aa17.04■□□□□ 0.32
FMR1-208ENST00000440235 NUTF2P61970 127 aaKnown RBP17.04■□□□□ 0.32
FMR1-208ENST00000440235 MORN2Q502X0 79 aa17.04■□□□□ 0.32
FMR1-208ENST00000440235 H3BUT2 72 aa17.04■□□□□ 0.32
FMR1-208ENST00000440235 DLX1P56177 255 aa17.04■□□□□ 0.32
FMR1-208ENST00000440235 LOXL3P58215 753 aa17.04■□□□□ 0.32
FMR1-208ENST00000440235 FTH1P19P0C7X4 201 aa17.03■□□□□ 0.32
FMR1-208ENST00000440235 NIT1Q86X76 327 aa17.03■□□□□ 0.32
FMR1-208ENST00000440235 MEGF9Q9H1U4 602 aa17.03■□□□□ 0.32
FMR1-208ENST00000440235 MUC22E2RYF6 1773 aaPredicted RBP17.03■□□□□ 0.32
FMR1-208ENST00000440235 BEX4Q9NWD9 120 aaPredicted RBP17.03■□□□□ 0.32
FMR1-208ENST00000440235 COL25A1Q9BXS0 654 aaPredicted RBP17.02■□□□□ 0.32
FMR1-208ENST00000440235 ZNRD1Q9P1U0 126 aa17.02■□□□□ 0.32
FMR1-208ENST00000440235 LIPFP07098 398 aa17.02■□□□□ 0.32
FMR1-208ENST00000440235 ANOS1P23352 680 aa17.02■□□□□ 0.32
FMR1-208ENST00000440235 TMEM78Q5T7P6 136 aa17.02■□□□□ 0.32
FMR1-208ENST00000440235 ZNF414Q96IQ9 312 aa17.02■□□□□ 0.32
FMR1-208ENST00000440235 AHRRA9YTQ3 701 aa17.02■□□□□ 0.31
FMR1-208ENST00000440235 PPIAL4CA0A0B4J2A2 164 aa17.01■□□□□ 0.31
FMR1-208ENST00000440235 KBTBD11-OT1A0A1B0GTJ5 212 aa17.01■□□□□ 0.31
FMR1-208ENST00000440235 PPIAL4GP0DN37 164 aa17.01■□□□□ 0.31
FMR1-208ENST00000440235 TMEM144Q7Z5S9 345 aa17.01■□□□□ 0.31
FMR1-208ENST00000440235 DOPEY1Q5JWR5 2465 aa17.01■□□□□ 0.31
FMR1-208ENST00000440235 TRBV20OR9-2A0A075B6H5 130 aa17.01■□□□□ 0.31
FMR1-208ENST00000440235 TRAV8-1A0A0A6YYK1 113 aa17.01■□□□□ 0.31
FMR1-208ENST00000440235 RIPPLY3P57055 190 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms