RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SLC31A2O15432 143 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 NDUFA2O43678 99 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 CIDEAO60543 219 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 NDUFS6O75380 124 aaKnown RBP2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 SAP30O75446 220 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 CDK2AP2O75956 126 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 HRASP01112 189 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 IFNA10P01566 189 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 IGHV3-7P01780 117 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 GYPAP02724 150 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 IFNA4P05014 189 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 ARG1P05089 322 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 FBP1P09467 338 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 PPIAL4FP0DN26 164 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 IGHV4-38-2P0DP08 117 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 RAB5AP20339 215 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 MDKP21741 143 aaPredicted RBP2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 CD1BP29016 333 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 MAS1LP35410 378 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 VDAC2P45880 294 aaPredicted RBP2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 PSMB3P49720 205 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 FGF8P55075 233 aaPredicted RBP2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 ATP5IP56385 69 aaPredicted RBP2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 OR2B8PP59922 312 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 KRTAP10-12P60413 245 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 HSPE1P61604 102 aaKnown RBP2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 RAB11AP62491 216 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 CCL8P80075 99 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 MEF2CQ06413 473 aaPredicted RBP2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 BSPH1Q075Z2 132 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZNF726P1Q15940 193 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 SPINK9Q5DT21 86 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 FFAR4Q5NUL3 377 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 SSX9Q7RTT3 188 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 SSX7Q7RTT5 188 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 RPP25LQ8N5L8 163 aaKnown RBP2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 FAM216BQ8N7L0 139 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 CYB561D1Q8N8Q1 229 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZNF439Q8NDP4 499 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 CA5BP1Q8WTZ4 195 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 TMEM190Q8WZ59 177 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 MALSU1Q96EH3 234 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 WFIKKN1Q96NZ8 548 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 NPCDR1Q9BY65 106 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 MAP1LC3BQ9GZQ8 125 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 GAL3ST2Q9H3Q3 398 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 LINC00574Q9H8X3 128 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 ENY2Q9NPA8 101 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 SIRT7Q9NRC8 400 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 TECRQ9NZ01 308 aaKnown RBP2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 PRELID1Q9Y255 219 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 PPIAL4AQ9Y536 164 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 LINC00312Q9Y6C7 94 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 ARHGAP21Q5T5U3 1957 aa2.72□□□□□ -1.97
HMGB3P11-201ENST00000440127 TRAV3A0A0B4J244 114 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 IGHV4-61A0A0C4DH41 118 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 A0A1W2PPV4 95 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 SMCO3A2RU48 225 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 C15orf61A6NNL5 157 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 ZNF727A8MUV8 499 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 SNURFLB1AK76 121 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 E7EQL1 145 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 TMEM250H0YL14 139 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 UPK2O00526 184 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 NDUFB3O43676 98 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 MPDU1O75352 247 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 MMP23AO75900 390 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 KBTBD11O94819 623 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 IGKV1D-33P01593 117 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 IGKV1-33P01594 117 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 IGHV4-59P01825 116 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 S100A6P06703 90 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 SAA2P0DJI9 122 aaPredicted RBP2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 CT45A6P0DMU7 189 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 CT45A5P0DMU8 189 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 CT45A7P0DMV0 189 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 FCGR2BP31994 310 aaPredicted RBP2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 OPRK1P41145 380 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 CDC34P49427 236 aaPredicted RBP2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 GNG10P50151 68 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 UCNP55089 124 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 TFF3Q07654 80 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 RAB31Q13636 194 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 POU2AF1Q16633 256 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 RTL8BQ17RB0 113 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 TMEM241Q24JQ0 296 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 LRRC10Q5BKY1 277 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 NCMAPQ5T1S8 102 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 UTF1Q5T230 341 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 DUX4L9Q6RFH8 374 aaPredicted RBP2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 HEPN1Q6WQI6 88 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 SLC25A48Q6ZT89 311 aaKnown RBP2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 TCF23Q7RTU1 214 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 ERASQ7Z444 233 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 GTSCR1Q86UQ5 136 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 TGIF2LYQ8IUE0 185 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 LINC00518Q8N0U6 118 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 VKORC1L1Q8N0U8 176 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 ZFP82Q8N141 532 aa2.71□□□□□ -1.98
HMGB3P11-201ENST00000440127 ABHD12Q8N2K0 398 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms