RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 DUXBA0A1W2PPF3 345 aa17.78■□□□□ 0.44
VARS-217ENST00000440048 K7EMT4 169 aa17.78■□□□□ 0.44
VARS-217ENST00000440048 ZNF207O43670 478 aaKnown RBP17.78■□□□□ 0.44
VARS-217ENST00000440048 NDUFB6O95139 128 aa17.78■□□□□ 0.44
VARS-217ENST00000440048 TNFRSF9Q07011 255 aa17.78■□□□□ 0.44
VARS-217ENST00000440048 MLANAQ16655 118 aa17.78■□□□□ 0.44
VARS-217ENST00000440048 LRTM2Q8N967 370 aa17.78■□□□□ 0.44
VARS-217ENST00000440048 NEURL2Q9BR09 285 aa17.78■□□□□ 0.44
VARS-217ENST00000440048 HSPB7Q9UBY9 170 aa17.78■□□□□ 0.44
VARS-217ENST00000440048 HUWE1Q7Z6Z7 4374 aaKnown RBP17.77■□□□□ 0.44
VARS-217ENST00000440048 A0A1B0GU03 582 aa17.77■□□□□ 0.44
VARS-217ENST00000440048 C15orf62A8K5M9 175 aa17.77■□□□□ 0.44
VARS-217ENST00000440048 CD7P09564 240 aa17.77■□□□□ 0.44
VARS-217ENST00000440048 OPRK1P41145 380 aa17.77■□□□□ 0.44
VARS-217ENST00000440048 C2orf83Q53S99 150 aa17.77■□□□□ 0.44
VARS-217ENST00000440048 SLC24A4Q8NFF2 622 aa17.77■□□□□ 0.44
VARS-217ENST00000440048 WWC2-AS2Q96NR7 200 aa17.77■□□□□ 0.44
VARS-217ENST00000440048 C7orf50Q9BRJ6 194 aaKnown RBP17.77■□□□□ 0.44
VARS-217ENST00000440048 MRPL36Q9P0J6 103 aaKnown RBP17.77■□□□□ 0.44
VARS-217ENST00000440048 U3KQK5 164 aa17.77■□□□□ 0.44
VARS-217ENST00000440048 CENPXA8MT69 81 aa17.76■□□□□ 0.43
VARS-217ENST00000440048 YIF1AO95070 293 aa17.76■□□□□ 0.43
VARS-217ENST00000440048 SCAF4O95104 1147 aaKnown RBP17.76■□□□□ 0.43
VARS-217ENST00000440048 TMEM50AO95807 157 aa17.76■□□□□ 0.43
VARS-217ENST00000440048 BTCP35070 178 aa17.76■□□□□ 0.43
VARS-217ENST00000440048 UBE2MP61081 183 aaKnown RBP17.76■□□□□ 0.43
VARS-217ENST00000440048 TMEM170AQ8WVE7 144 aa17.76■□□□□ 0.43
VARS-217ENST00000440048 HIPK2Q9H2X6 1198 aa17.76■□□□□ 0.43
VARS-217ENST00000440048 RBKSQ9H477 322 aa17.76■□□□□ 0.43
VARS-217ENST00000440048 FLVCR2Q9UPI3 526 aa17.76■□□□□ 0.43
VARS-217ENST00000440048 TRAV25A0A0B4J276 109 aa17.75■□□□□ 0.43
VARS-217ENST00000440048 OR1S1Q8NH92 325 aa17.75■□□□□ 0.43
VARS-217ENST00000440048 OR10C1Q96KK4 312 aa17.75■□□□□ 0.43
VARS-217ENST00000440048 TUBA4BQ9H853 241 aa17.75■□□□□ 0.43
VARS-217ENST00000440048 A6NHS1 94 aa17.74■□□□□ 0.43
VARS-217ENST00000440048 PITX3O75364 302 aa17.74■□□□□ 0.43
VARS-217ENST00000440048 NPY1RP25929 384 aa17.74■□□□□ 0.43
VARS-217ENST00000440048 RBPMS2Q6ZRY4 209 aaKnown RBP17.74■□□□□ 0.43
VARS-217ENST00000440048 OR4X1Q8NH49 305 aa17.74■□□□□ 0.43
VARS-217ENST00000440048 RNASEH2CQ8TDP1 164 aaKnown RBP17.74■□□□□ 0.43
VARS-217ENST00000440048 RPS10-NUDT3A0A1W2PQS6 291 aa17.73■□□□□ 0.43
VARS-217ENST00000440048 CLN5O75503 358 aa17.73■□□□□ 0.43
VARS-217ENST00000440048 CNPY1Q3B7I2 92 aa17.73■□□□□ 0.43
VARS-217ENST00000440048 TOMM20LQ6UXN7 152 aa17.73■□□□□ 0.43
VARS-217ENST00000440048 DTD1Q8TEA8 209 aa17.73■□□□□ 0.43
VARS-217ENST00000440048 WFDC10AQ9H1F0 79 aa17.73■□□□□ 0.43
VARS-217ENST00000440048 SMPXQ9UHP9 88 aa17.73■□□□□ 0.43
VARS-217ENST00000440048 TMED3Q9Y3Q3 217 aa17.73■□□□□ 0.43
VARS-217ENST00000440048 NBEAL2Q6ZNJ1 2754 aa17.72■□□□□ 0.43
VARS-217ENST00000440048 C9orf170A2RU37 121 aa17.72■□□□□ 0.43
VARS-217ENST00000440048 PLA2G10O15496 165 aa17.72■□□□□ 0.43
VARS-217ENST00000440048 SLC25A6P12236 298 aa17.72■□□□□ 0.43
VARS-217ENST00000440048 ZNF600Q6ZNG1 722 aa17.72■□□□□ 0.43
VARS-217ENST00000440048 NOXA1Q86UR1 476 aa17.72■□□□□ 0.43
VARS-217ENST00000440048 DEFB125Q8N687 156 aa17.72■□□□□ 0.43
VARS-217ENST00000440048 OR52B4Q8NGK2 314 aa17.72■□□□□ 0.43
VARS-217ENST00000440048 IGHV7-4-1A0A0J9YVY3 117 aa17.71■□□□□ 0.43
VARS-217ENST00000440048 OR11H12B2RN74 326 aa17.71■□□□□ 0.43
VARS-217ENST00000440048 IFNA10P01566 189 aa17.71■□□□□ 0.43
VARS-217ENST00000440048 HOXB5P09067 269 aa17.71■□□□□ 0.43
VARS-217ENST00000440048 LINC00299Q6ZSB3 139 aa17.71■□□□□ 0.43
VARS-217ENST00000440048 SLC16A13Q7RTY0 426 aa17.71■□□□□ 0.43
VARS-217ENST00000440048 TMEM116Q8NCL8 245 aa17.71■□□□□ 0.43
VARS-217ENST00000440048 PUS1Q9Y606 427 aaKnown RBP eCLIP17.71■□□□□ 0.43
VARS-217ENST00000440048 U3KQ87 197 aa17.71■□□□□ 0.43
VARS-217ENST00000440048 IGHV3-49A0A0A0MS15 119 aa17.7■□□□□ 0.42
VARS-217ENST00000440048 TRAV14DV4A0A0A6YYC5 116 aa17.7■□□□□ 0.42
VARS-217ENST00000440048 CHEK1O14757 476 aa17.7■□□□□ 0.42
VARS-217ENST00000440048 TSPAN4O14817 238 aa17.7■□□□□ 0.42
VARS-217ENST00000440048 ANXA7P20073 488 aaKnown RBP17.7■□□□□ 0.42
VARS-217ENST00000440048 GGNBP1Q5YKI7 109 aa17.7■□□□□ 0.42
VARS-217ENST00000440048 LAMTOR1Q6IAA8 161 aa17.7■□□□□ 0.42
VARS-217ENST00000440048 PRSS54Q6PEW0 395 aa17.7■□□□□ 0.42
VARS-217ENST00000440048 TM2D3Q9BRN9 247 aa17.7■□□□□ 0.42
VARS-217ENST00000440048 RHPN1-AS1Q9BWJ2 59 aa17.7■□□□□ 0.42
VARS-217ENST00000440048 ZFAND3Q9H8U3 227 aa17.7■□□□□ 0.42
VARS-217ENST00000440048 LYRM1O43325 122 aa17.69■□□□□ 0.42
VARS-217ENST00000440048 OR4E1P0C645 316 aa17.69■□□□□ 0.42
VARS-217ENST00000440048 SLC25A4P12235 298 aa17.69■□□□□ 0.42
VARS-217ENST00000440048 DHRS2Q13268 280 aa17.69■□□□□ 0.42
VARS-217ENST00000440048 HAGHQ16775 308 aa17.69■□□□□ 0.42
VARS-217ENST00000440048 RCHY1Q96PM5 261 aa17.69■□□□□ 0.42
VARS-217ENST00000440048 SPAG8Q99932 426 aaPredicted RBP17.69■□□□□ 0.42
VARS-217ENST00000440048 GINS3Q9BRX5 216 aa17.69■□□□□ 0.42
VARS-217ENST00000440048 CCDC32Q9BV29 185 aa17.69■□□□□ 0.42
VARS-217ENST00000440048 ZMAT4Q9H898 229 aa17.69■□□□□ 0.42
VARS-217ENST00000440048 TRAV30A0A087WSZ9 112 aa17.68■□□□□ 0.42
VARS-217ENST00000440048 FAM90A26D6RGX4 464 aa17.68■□□□□ 0.42
VARS-217ENST00000440048 SCGB2A1O75556 95 aa17.68■□□□□ 0.42
VARS-217ENST00000440048 IGKV1-17P01599 117 aa17.68■□□□□ 0.42
VARS-217ENST00000440048 RND2P52198 227 aa17.68■□□□□ 0.42
VARS-217ENST00000440048 TIGITQ495A1 244 aa17.68■□□□□ 0.42
VARS-217ENST00000440048 ETFRF1Q6IPR1 90 aa17.68■□□□□ 0.42
VARS-217ENST00000440048 LINC00322Q6ZN03 302 aaPredicted RBP17.68■□□□□ 0.42
VARS-217ENST00000440048 LYG2Q86SG7 212 aa17.68■□□□□ 0.42
VARS-217ENST00000440048 RNF2Q99496 336 aa17.68■□□□□ 0.42
VARS-217ENST00000440048 SRD5A3Q9H8P0 318 aa17.68■□□□□ 0.42
VARS-217ENST00000440048 IGHV3OR16-13A0A075B7E8 117 aa17.67■□□□□ 0.42
VARS-217ENST00000440048 IGHV3-74A0A0B4J1X5 117 aa17.67■□□□□ 0.42
VARS-217ENST00000440048 C4orf46Q504U0 113 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms