RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 ARL14EPLP0DKL9 152 aa12□□□□□ -0.49
CPSF7-205ENST00000439958 PAX2Q02962 417 aa12□□□□□ -0.49
CPSF7-205ENST00000439958 SUN5Q8TC36 379 aa12□□□□□ -0.49
CPSF7-205ENST00000439958 SCAF4O95104 1147 aaKnown RBP12□□□□□ -0.49
CPSF7-205ENST00000439958 CD5P06127 495 aa12□□□□□ -0.49
CPSF7-205ENST00000439958 PSMB3P49720 205 aa12□□□□□ -0.49
CPSF7-205ENST00000439958 Q5PR19 223 aa12□□□□□ -0.49
CPSF7-205ENST00000439958 MINOS1Q5TGZ0 78 aa12□□□□□ -0.49
CPSF7-205ENST00000439958 TIMM9Q9Y5J7 89 aa12□□□□□ -0.49
CPSF7-205ENST00000439958 MINOS1-NBL1R4GNA1 71 aa12□□□□□ -0.49
CPSF7-205ENST00000439958 BTBD17A6NE02 478 aa12□□□□□ -0.49
CPSF7-205ENST00000439958 PRSS46E5RG02 174 aa12□□□□□ -0.49
CPSF7-205ENST00000439958 YIF1AO95070 293 aa12□□□□□ -0.49
CPSF7-205ENST00000439958 COMMD1Q8N668 190 aa12□□□□□ -0.49
CPSF7-205ENST00000439958 OR1B1Q8NGR6 318 aa12□□□□□ -0.49
CPSF7-205ENST00000439958 ARPC1AQ92747 370 aa12□□□□□ -0.49
CPSF7-205ENST00000439958 MALSU1Q96EH3 234 aa12□□□□□ -0.49
CPSF7-205ENST00000439958 GGACTQ9BVM4 153 aa12□□□□□ -0.49
CPSF7-205ENST00000439958 FAM74A7A6NL05 159 aa11.99□□□□□ -0.49
CPSF7-205ENST00000439958 B4DSR2 109 aa11.99□□□□□ -0.49
CPSF7-205ENST00000439958 BCL2P10415 239 aa11.99□□□□□ -0.49
CPSF7-205ENST00000439958 FAM74A3Q4VXF1 159 aa11.99□□□□□ -0.49
CPSF7-205ENST00000439958 TMEM144Q7Z5S9 345 aa11.99□□□□□ -0.49
CPSF7-205ENST00000439958 UNC79Q9P2D8 2635 aa11.99□□□□□ -0.49
CPSF7-205ENST00000439958 IGHV3OR16-8A0A075B7F1 116 aa11.99□□□□□ -0.49
CPSF7-205ENST00000439958 MIR17HGQ75NE6 70 aa11.99□□□□□ -0.49
CPSF7-205ENST00000439958 OR4X1Q8NH49 305 aa11.99□□□□□ -0.49
CPSF7-205ENST00000439958 COX7A2P2O60397 106 aa11.99□□□□□ -0.49
CPSF7-205ENST00000439958 SNAPINO95295 136 aa11.99□□□□□ -0.49
CPSF7-205ENST00000439958 MFAP2P55001 183 aa11.99□□□□□ -0.49
CPSF7-205ENST00000439958 VWC2Q2TAL6 325 aa11.99□□□□□ -0.49
CPSF7-205ENST00000439958 DPPA3Q6W0C5 159 aa11.99□□□□□ -0.49
CPSF7-205ENST00000439958 MS4A10Q96PG2 267 aa11.99□□□□□ -0.49
CPSF7-205ENST00000439958 SSX3Q99909 188 aa11.99□□□□□ -0.49
CPSF7-205ENST00000439958 SEC11CQ9BY50 192 aa11.99□□□□□ -0.49
CPSF7-205ENST00000439958 KCNIP2Q9NS61 270 aa11.99□□□□□ -0.49
CPSF7-205ENST00000439958 NDPQ00604 133 aa11.98□□□□□ -0.49
CPSF7-205ENST00000439958 ICAM4Q14773 271 aa11.98□□□□□ -0.49
CPSF7-205ENST00000439958 RBMS3Q6XE24 437 aaKnown RBP11.98□□□□□ -0.49
CPSF7-205ENST00000439958 AURKAIP1Q9NWT8 199 aaPredicted RBP11.98□□□□□ -0.49
CPSF7-205ENST00000439958 IGHV1-69DA0A0B4J2H0 117 aa11.98□□□□□ -0.49
CPSF7-205ENST00000439958 MDFIC2A0A1B0GVS7 189 aa11.98□□□□□ -0.49
CPSF7-205ENST00000439958 IGHV1-69P01742 117 aa11.98□□□□□ -0.49
CPSF7-205ENST00000439958 MRGPRG-AS1Q2M3A8 158 aa11.98□□□□□ -0.49
CPSF7-205ENST00000439958 Q96MF0 132 aa11.98□□□□□ -0.49
CPSF7-205ENST00000439958 RBM14Q96PK6 669 aaKnown RBP11.98□□□□□ -0.49
CPSF7-205ENST00000439958 C1RLQ9NZP8 487 aa11.98□□□□□ -0.49
CPSF7-205ENST00000439958 PRB4P10163 310 aaPredicted RBP11.98□□□□□ -0.49
CPSF7-205ENST00000439958 PLA2G2AP14555 144 aa11.98□□□□□ -0.49
CPSF7-205ENST00000439958 RHOBP62745 196 aa11.98□□□□□ -0.49
CPSF7-205ENST00000439958 SLC35E3Q7Z769 313 aa11.98□□□□□ -0.49
CPSF7-205ENST00000439958 LYPD6BQ8NI32 183 aa11.98□□□□□ -0.49
CPSF7-205ENST00000439958 OR2J3O76001 311 aa11.97□□□□□ -0.49
CPSF7-205ENST00000439958 LYZP61626 148 aa11.97□□□□□ -0.49
CPSF7-205ENST00000439958 C1orf159Q96HA4 380 aa11.97□□□□□ -0.49
CPSF7-205ENST00000439958 UNKLQ9H9P5 680 aaKnown RBP11.97□□□□□ -0.49
CPSF7-205ENST00000439958 NBPF19A0A087WUL8 3843 aa11.97□□□□□ -0.49
CPSF7-205ENST00000439958 TEX22C9J3V5 150 aa11.97□□□□□ -0.49
CPSF7-205ENST00000439958 H3BUX3 64 aa11.97□□□□□ -0.49
CPSF7-205ENST00000439958 GOSR1O95249 250 aa11.97□□□□□ -0.49
CPSF7-205ENST00000439958 HNF1AP20823 631 aa11.97□□□□□ -0.49
CPSF7-205ENST00000439958 UNQ5815/PRO19632Q6UWF5 114 aa11.97□□□□□ -0.49
CPSF7-205ENST00000439958 OR51G1Q8NGK1 321 aa11.97□□□□□ -0.49
CPSF7-205ENST00000439958 KMT2BQ9UMN6 2715 aaPredicted RBP11.97□□□□□ -0.49
CPSF7-205ENST00000439958 AWAT1Q58HT5 328 aa11.97□□□□□ -0.49
CPSF7-205ENST00000439958 LEMD1Q68G75 181 aa11.97□□□□□ -0.49
CPSF7-205ENST00000439958 TBL2Q9Y4P3 447 aaKnown RBP11.97□□□□□ -0.49
CPSF7-205ENST00000439958 LSM4Q9Y4Z0 139 aaKnown RBP11.97□□□□□ -0.49
CPSF7-205ENST00000439958 F11RQ9Y624 299 aaKnown RBP11.97□□□□□ -0.49
CPSF7-205ENST00000439958 TRAV5A0A0B4J249 113 aa11.96□□□□□ -0.49
CPSF7-205ENST00000439958 H3BTX0 84 aa11.96□□□□□ -0.49
CPSF7-205ENST00000439958 AVPP01185 164 aa11.96□□□□□ -0.49
CPSF7-205ENST00000439958 Q56UQ5 140 aa11.96□□□□□ -0.49
CPSF7-205ENST00000439958 RNASEH2CQ8TDP1 164 aaKnown RBP11.96□□□□□ -0.49
CPSF7-205ENST00000439958 NIPSNAP3BQ9BS92 247 aa11.96□□□□□ -0.49
CPSF7-205ENST00000439958 C11orf94C9JXX5 98 aa11.96□□□□□ -0.5
CPSF7-205ENST00000439958 CRYGBP07316 175 aa11.96□□□□□ -0.5
CPSF7-205ENST00000439958 CYP2G1PQ6ZSU1 146 aa11.96□□□□□ -0.5
CPSF7-205ENST00000439958 ISOC2Q96AB3 205 aa11.96□□□□□ -0.5
CPSF7-205ENST00000439958 HSPB9Q9BQS6 159 aa11.96□□□□□ -0.5
CPSF7-205ENST00000439958 PARD6GQ9BYG4 376 aaPredicted RBP11.96□□□□□ -0.5
CPSF7-205ENST00000439958 LOC102723971A0A1B0GUV8 181 aa11.95□□□□□ -0.5
CPSF7-205ENST00000439958 ZNF727A8MUV8 499 aa11.95□□□□□ -0.5
CPSF7-205ENST00000439958 PAX8Q06710 450 aa11.95□□□□□ -0.5
CPSF7-205ENST00000439958 OR1P1Q8NH06 330 aa11.95□□□□□ -0.5
CPSF7-205ENST00000439958 DUX5Q96PT3 197 aa11.95□□□□□ -0.5
CPSF7-205ENST00000439958 VAX2Q9UIW0 290 aa11.95□□□□□ -0.5
CPSF7-205ENST00000439958 URGCP-MRPS24S4R325 110 aa11.95□□□□□ -0.5
CPSF7-205ENST00000439958 G3V318 75 aa11.95□□□□□ -0.5
CPSF7-205ENST00000439958 MAS1LP35410 378 aa11.95□□□□□ -0.5
CPSF7-205ENST00000439958 ATP5G3P48201 142 aa11.95□□□□□ -0.5
CPSF7-205ENST00000439958 MEF2BQ02080 365 aaPredicted RBP11.95□□□□□ -0.5
CPSF7-205ENST00000439958 DEFB113Q30KQ7 82 aa11.95□□□□□ -0.5
CPSF7-205ENST00000439958 ETFRF1Q6IPR1 90 aa11.95□□□□□ -0.5
CPSF7-205ENST00000439958 SPNS3Q6ZMD2 512 aa11.95□□□□□ -0.5
CPSF7-205ENST00000439958 CLRN3Q8NCR9 226 aa11.95□□□□□ -0.5
CPSF7-205ENST00000439958 MBD3L1Q8WWY6 194 aa11.95□□□□□ -0.5
CPSF7-205ENST00000439958 CACNG8Q8WXS5 425 aa11.95□□□□□ -0.5
CPSF7-205ENST00000439958 RPH3ALQ9UNE2 315 aa11.95□□□□□ -0.5
CPSF7-205ENST00000439958 SRP19P09132 144 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms