RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 K7EMT4 169 aa18.05■□□□□ 0.48
CPNE1-217ENST00000439669 CCR6P51684 374 aa18.05■□□□□ 0.48
CPNE1-217ENST00000439669 SMCO1Q147U7 214 aa18.05■□□□□ 0.48
CPNE1-217ENST00000439669 RBMS2Q15434 407 aaKnown RBP18.05■□□□□ 0.48
CPNE1-217ENST00000439669 BSXQ3C1V8 233 aa18.05■□□□□ 0.48
CPNE1-217ENST00000439669 CENPSQ8N2Z9 138 aa18.05■□□□□ 0.48
CPNE1-217ENST00000439669 SLC24A4Q8NFF2 622 aa18.05■□□□□ 0.48
CPNE1-217ENST00000439669 OR52B4Q8NGK2 314 aa18.05■□□□□ 0.48
CPNE1-217ENST00000439669 WFDC10AQ9H1F0 79 aa18.05■□□□□ 0.48
CPNE1-217ENST00000439669 DEFB125Q8N687 156 aa18.04■□□□□ 0.48
CPNE1-217ENST00000439669 ZNF414Q96IQ9 312 aa18.04■□□□□ 0.48
CPNE1-217ENST00000439669 HIPK2Q9H2X6 1198 aa18.04■□□□□ 0.48
CPNE1-217ENST00000439669 FNDC4Q9H6D8 234 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-217ENST00000439669 NAP1L6A6NFF2 107 aa18.03■□□□□ 0.48
CPNE1-217ENST00000439669 OR11H12B2RN74 326 aa18.03■□□□□ 0.48
CPNE1-217ENST00000439669 ANKRD55Q3KP44 614 aa18.03■□□□□ 0.48
CPNE1-217ENST00000439669 SDHCQ99643 169 aaPredicted RBP18.03■□□□□ 0.48
CPNE1-217ENST00000439669 SRD5A3Q9H8P0 318 aa18.03■□□□□ 0.48
CPNE1-217ENST00000439669 RPS10-NUDT3A0A1W2PQS6 291 aa18.02■□□□□ 0.48
CPNE1-217ENST00000439669 TNFRSF9Q07011 255 aa18.02■□□□□ 0.48
CPNE1-217ENST00000439669 PPP1R1AQ13522 171 aa18.02■□□□□ 0.48
CPNE1-217ENST00000439669 MLANAQ16655 118 aa18.02■□□□□ 0.48
CPNE1-217ENST00000439669 C2orf83Q53S99 150 aa18.02■□□□□ 0.48
CPNE1-217ENST00000439669 LAMTOR1Q6IAA8 161 aa18.02■□□□□ 0.48
CPNE1-217ENST00000439669 OR1S1Q8NH92 325 aa18.02■□□□□ 0.48
CPNE1-217ENST00000439669 MRPL36Q9P0J6 103 aaKnown RBP18.02■□□□□ 0.48
CPNE1-217ENST00000439669 IGHV3-49A0A0A0MS15 119 aa18.01■□□□□ 0.47
CPNE1-217ENST00000439669 DUXBA0A1W2PPF3 345 aa18.01■□□□□ 0.47
CPNE1-217ENST00000439669 SFT2D2O95562 160 aa18.01■□□□□ 0.47
CPNE1-217ENST00000439669 TMEM50AO95807 157 aa18.01■□□□□ 0.47
CPNE1-217ENST00000439669 NPY1RP25929 384 aa18.01■□□□□ 0.47
CPNE1-217ENST00000439669 HAGHQ16775 308 aa18.01■□□□□ 0.47
CPNE1-217ENST00000439669 ZNF600Q6ZNG1 722 aa18.01■□□□□ 0.47
CPNE1-217ENST00000439669 OR10C1Q96KK4 312 aa18.01■□□□□ 0.47
CPNE1-217ENST00000439669 TM2D3Q9BRN9 247 aa18.01■□□□□ 0.47
CPNE1-217ENST00000439669 GINS3Q9BRX5 216 aa18.01■□□□□ 0.47
CPNE1-217ENST00000439669 HSPB7Q9UBY9 170 aa18.01■□□□□ 0.47
CPNE1-217ENST00000439669 SMPXQ9UHP9 88 aa18.01■□□□□ 0.47
CPNE1-217ENST00000439669 IGHV7-4-1A0A0J9YVY3 117 aa18■□□□□ 0.47
CPNE1-217ENST00000439669 A0A1B0GU03 582 aa18■□□□□ 0.47
CPNE1-217ENST00000439669 CLN5O75503 358 aa18■□□□□ 0.47
CPNE1-217ENST00000439669 SCGB2A1O75556 95 aa18■□□□□ 0.47
CPNE1-217ENST00000439669 TOMM20LQ6UXN7 152 aa18■□□□□ 0.47
CPNE1-217ENST00000439669 TMEM116Q8NCL8 245 aa18■□□□□ 0.47
CPNE1-217ENST00000439669 OR4X1Q8NH49 305 aa18■□□□□ 0.47
CPNE1-217ENST00000439669 SPAG8Q99932 426 aaPredicted RBP18■□□□□ 0.47
CPNE1-217ENST00000439669 RBKSQ9H477 322 aa18■□□□□ 0.47
CPNE1-217ENST00000439669 TRAV14DV4A0A0A6YYC5 116 aa17.99■□□□□ 0.47
CPNE1-217ENST00000439669 CENPXA8MT69 81 aa17.99■□□□□ 0.47
CPNE1-217ENST00000439669 TSPAN4O14817 238 aa17.99■□□□□ 0.47
CPNE1-217ENST00000439669 NDUFB6O95139 128 aa17.99■□□□□ 0.47
CPNE1-217ENST00000439669 IFNA10P01566 189 aa17.99■□□□□ 0.47
CPNE1-217ENST00000439669 IL7P13232 177 aa17.99■□□□□ 0.47
CPNE1-217ENST00000439669 NOXA1Q86UR1 476 aa17.99■□□□□ 0.47
CPNE1-217ENST00000439669 LRTM2Q8N967 370 aa17.99■□□□□ 0.47
CPNE1-217ENST00000439669 RNASEH2CQ8TDP1 164 aaKnown RBP17.99■□□□□ 0.47
CPNE1-217ENST00000439669 DTD1Q8TEA8 209 aa17.99■□□□□ 0.47
CPNE1-217ENST00000439669 RHPN1-AS1Q9BWJ2 59 aa17.99■□□□□ 0.47
CPNE1-217ENST00000439669 PUS1Q9Y606 427 aaKnown RBP eCLIP17.99■□□□□ 0.47
CPNE1-217ENST00000439669 SPATA25Q9BR10 227 aa17.98■□□□□ 0.47
CPNE1-217ENST00000439669 IGHV3OR16-13A0A075B7E8 117 aa17.97■□□□□ 0.47
CPNE1-217ENST00000439669 IGHV3-74A0A0B4J1X5 117 aa17.97■□□□□ 0.47
CPNE1-217ENST00000439669 CHEK1O14757 476 aa17.97■□□□□ 0.47
CPNE1-217ENST00000439669 UBE2MP61081 183 aaKnown RBP17.97■□□□□ 0.47
CPNE1-217ENST00000439669 TMEM170AQ8WVE7 144 aa17.97■□□□□ 0.47
CPNE1-217ENST00000439669 RNF2Q99496 336 aa17.97■□□□□ 0.47
CPNE1-217ENST00000439669 C7orf50Q9BRJ6 194 aaKnown RBP17.97■□□□□ 0.47
CPNE1-217ENST00000439669 RBMY1BA6NDE4 496 aaKnown RBP17.96■□□□□ 0.47
CPNE1-217ENST00000439669 RBMY1EA6NEQ0 496 aaKnown RBP17.96■□□□□ 0.47
CPNE1-217ENST00000439669 RBMY1DP0C7P1 496 aaKnown RBP17.96■□□□□ 0.47
CPNE1-217ENST00000439669 SLC25A4P12235 298 aa17.96■□□□□ 0.47
CPNE1-217ENST00000439669 BMI1P35226 326 aa17.96■□□□□ 0.47
CPNE1-217ENST00000439669 RND2P52198 227 aa17.96■□□□□ 0.47
CPNE1-217ENST00000439669 ETFRF1Q6IPR1 90 aa17.96■□□□□ 0.47
CPNE1-217ENST00000439669 LINC00322Q6ZN03 302 aaPredicted RBP17.96■□□□□ 0.47
CPNE1-217ENST00000439669 ZFAND3Q9H8U3 227 aa17.96■□□□□ 0.47
CPNE1-217ENST00000439669 FLVCR2Q9UPI3 526 aa17.96■□□□□ 0.47
CPNE1-217ENST00000439669 TMED3Q9Y3Q3 217 aa17.96■□□□□ 0.47
CPNE1-217ENST00000439669 U3KQ87 197 aa17.96■□□□□ 0.47
CPNE1-217ENST00000439669 TRAV30A0A087WSZ9 112 aa17.95■□□□□ 0.46
CPNE1-217ENST00000439669 OR4C46A6NHA9 309 aa17.95■□□□□ 0.46
CPNE1-217ENST00000439669 HOXB5P09067 269 aa17.95■□□□□ 0.46
CPNE1-217ENST00000439669 TIGITQ495A1 244 aa17.95■□□□□ 0.46
CPNE1-217ENST00000439669 PRSS54Q6PEW0 395 aa17.95■□□□□ 0.46
CPNE1-217ENST00000439669 UBQLN2Q9UHD9 624 aa17.95■□□□□ 0.46
CPNE1-217ENST00000439669 PITX3O75364 302 aa17.94■□□□□ 0.46
CPNE1-217ENST00000439669 SLC25A6P12236 298 aa17.94■□□□□ 0.46
CPNE1-217ENST00000439669 BTCP35070 178 aa17.94■□□□□ 0.46
CPNE1-217ENST00000439669 IGKV3-7A0A075B6H7 116 aa17.93■□□□□ 0.46
CPNE1-217ENST00000439669 C9orf170A2RU37 121 aa17.93■□□□□ 0.46
CPNE1-217ENST00000439669 IGKV1-17P01599 117 aa17.93■□□□□ 0.46
CPNE1-217ENST00000439669 IFNA4P05014 189 aa17.93■□□□□ 0.46
CPNE1-217ENST00000439669 IAPPP10997 89 aa17.93■□□□□ 0.46
CPNE1-217ENST00000439669 OR1S2Q8NGQ3 325 aa17.93■□□□□ 0.46
CPNE1-217ENST00000439669 IGHV3-66A0A0C4DH42 116 aa17.92■□□□□ 0.46
CPNE1-217ENST00000439669 IGLC1P0CG04 106 aa17.92■□□□□ 0.46
CPNE1-217ENST00000439669 ANXA7P20073 488 aaKnown RBP17.92■□□□□ 0.46
CPNE1-217ENST00000439669 OR10J1P30954 320 aa17.92■□□□□ 0.46
CPNE1-217ENST00000439669 TFPI2P48307 235 aa17.92■□□□□ 0.46
CPNE1-217ENST00000439669 GGNBP1Q5YKI7 109 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms