RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 AWAT1Q58HT5 328 aa9.86□□□□□ -0.83
SCLT1-202ENST00000439369 C10orf99Q6UWK7 81 aa9.86□□□□□ -0.83
SCLT1-202ENST00000439369 SLC16A13Q7RTY0 426 aa9.86□□□□□ -0.83
SCLT1-202ENST00000439369 HAPLN4Q86UW8 402 aa9.86□□□□□ -0.83
SCLT1-202ENST00000439369 ZNF491Q8N8L2 437 aa9.86□□□□□ -0.83
SCLT1-202ENST00000439369 TMEM116Q8NCL8 245 aa9.86□□□□□ -0.83
SCLT1-202ENST00000439369 OR4X1Q8NH49 305 aa9.86□□□□□ -0.83
SCLT1-202ENST00000439369 SCARB1Q8WTV0 552 aa9.86□□□□□ -0.83
SCLT1-202ENST00000439369 SLC35E1Q96K37 410 aa9.86□□□□□ -0.83
SCLT1-202ENST00000439369 TMEM147Q9BVK8 224 aa9.86□□□□□ -0.83
SCLT1-202ENST00000439369 C19orf24Q9BVV8 132 aa9.86□□□□□ -0.83
SCLT1-202ENST00000439369 MFFQ9GZY8 342 aa9.86□□□□□ -0.83
SCLT1-202ENST00000439369 FNDC4Q9H6D8 234 aaPredicted RBP9.86□□□□□ -0.83
SCLT1-202ENST00000439369 C21orf62Q9NYP8 219 aa9.86□□□□□ -0.83
SCLT1-202ENST00000439369 C2CD3Q4AC94 2353 aa9.86□□□□□ -0.83
SCLT1-202ENST00000439369 TAAR5O14804 337 aa9.85□□□□□ -0.83
SCLT1-202ENST00000439369 ARPC5O15511 151 aa9.85□□□□□ -0.83
SCLT1-202ENST00000439369 RPLP1P05386 114 aaKnown RBP9.85□□□□□ -0.83
SCLT1-202ENST00000439369 NPBWR1P48145 328 aa9.85□□□□□ -0.83
SCLT1-202ENST00000439369 RUNX1Q01196 453 aa9.85□□□□□ -0.83
SCLT1-202ENST00000439369 NHLH2Q02577 135 aa9.85□□□□□ -0.83
SCLT1-202ENST00000439369 CD300CQ08708 224 aa9.85□□□□□ -0.83
SCLT1-202ENST00000439369 ARL16Q0P5N6 197 aa9.85□□□□□ -0.83
SCLT1-202ENST00000439369 TCTEX1D4Q5JR98 221 aa9.85□□□□□ -0.83
SCLT1-202ENST00000439369 ZNF343Q6P1L6 599 aa9.85□□□□□ -0.83
SCLT1-202ENST00000439369 LILRB2Q8N423 598 aa9.85□□□□□ -0.83
SCLT1-202ENST00000439369 KCNRGQ8N5I3 272 aa9.85□□□□□ -0.83
SCLT1-202ENST00000439369 ZNF502Q8TBZ5 544 aa9.85□□□□□ -0.83
SCLT1-202ENST00000439369 UQCC1Q9NVA1 299 aa9.85□□□□□ -0.83
SCLT1-202ENST00000439369 TSSC4Q9Y5U2 329 aaPredicted RBP9.85□□□□□ -0.83
SCLT1-202ENST00000439369 NIPBLQ6KC79 2804 aaeCLIP9.84□□□□□ -0.833e-7■■■■□ 22.5
SCLT1-202ENST00000439369 TRAV30A0A087WSZ9 112 aa9.84□□□□□ -0.83
SCLT1-202ENST00000439369 MFSD2BA6NFX1 497 aa9.84□□□□□ -0.83
SCLT1-202ENST00000439369 LGALS1P09382 135 aaKnown RBP9.84□□□□□ -0.83
SCLT1-202ENST00000439369 C4BPBP20851 252 aa9.84□□□□□ -0.83
SCLT1-202ENST00000439369 AP2S1P53680 142 aaPredicted RBP9.84□□□□□ -0.83
SCLT1-202ENST00000439369 GAMTQ14353 236 aa9.84□□□□□ -0.83
SCLT1-202ENST00000439369 ACSM6Q6P461 480 aa9.84□□□□□ -0.83
SCLT1-202ENST00000439369 SPSB3Q6PJ21 355 aa9.84□□□□□ -0.83
SCLT1-202ENST00000439369 TMEM144Q7Z5S9 345 aa9.84□□□□□ -0.83
SCLT1-202ENST00000439369 TMEM217Q8N7C4 229 aa9.84□□□□□ -0.83
SCLT1-202ENST00000439369 OR5C1Q8NGR4 320 aa9.84□□□□□ -0.83
SCLT1-202ENST00000439369 C4orf3Q8WVX3 66 aa9.84□□□□□ -0.83
SCLT1-202ENST00000439369 ATP5SQ99766 215 aa9.84□□□□□ -0.83
SCLT1-202ENST00000439369 PARD6GQ9BYG4 376 aaPredicted RBP9.84□□□□□ -0.83
SCLT1-202ENST00000439369 NPVFQ9HCQ7 196 aa9.84□□□□□ -0.83
SCLT1-202ENST00000439369 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.83□□□□□ -0.84
SCLT1-202ENST00000439369 TCRBV4S1A1TA0A5B7 111 aa9.83□□□□□ -0.84
SCLT1-202ENST00000439369 MPDU1O75352 247 aa9.83□□□□□ -0.84
SCLT1-202ENST00000439369 CLN5O75503 358 aa9.83□□□□□ -0.84
SCLT1-202ENST00000439369 CD28P10747 220 aa9.83□□□□□ -0.84
SCLT1-202ENST00000439369 RND2P52198 227 aa9.83□□□□□ -0.84
SCLT1-202ENST00000439369 ZNF266Q14584 549 aa9.83□□□□□ -0.84
SCLT1-202ENST00000439369 NDUFA11Q86Y39 141 aa9.83□□□□□ -0.84
SCLT1-202ENST00000439369 THAP8Q8NA92 274 aa9.83□□□□□ -0.84
SCLT1-202ENST00000439369 BSCL2Q96G97 398 aaPredicted RBP9.83□□□□□ -0.84
SCLT1-202ENST00000439369 CCDC140Q96MF4 163 aa9.83□□□□□ -0.84
SCLT1-202ENST00000439369 FBXL17Q9UF56 701 aa9.83□□□□□ -0.84
SCLT1-202ENST00000439369 JMJD1CQ15652 2540 aa9.82□□□□□ -0.84
SCLT1-202ENST00000439369 FABP1P07148 127 aa9.82□□□□□ -0.84
SCLT1-202ENST00000439369 EIF2B2P49770 351 aaKnown RBP9.82□□□□□ -0.84
SCLT1-202ENST00000439369 AKR1C1Q04828 323 aa9.82□□□□□ -0.84
SCLT1-202ENST00000439369 RAB31Q13636 194 aa9.82□□□□□ -0.84
SCLT1-202ENST00000439369 LCNL1Q6ZST4 164 aa9.82□□□□□ -0.84
SCLT1-202ENST00000439369 ACY3Q96HD9 319 aa9.82□□□□□ -0.84
SCLT1-202ENST00000439369 WDR83OSQ9Y284 106 aa9.82□□□□□ -0.84
SCLT1-202ENST00000439369 BORCS7-ASMTA0A0B4J1R7 106 aa9.81□□□□□ -0.84
SCLT1-202ENST00000439369 F8W735 103 aaPredicted RBP9.81□□□□□ -0.84
SCLT1-202ENST00000439369 I3L521 148 aa9.81□□□□□ -0.84
SCLT1-202ENST00000439369 NUPL2O15504 423 aaKnown RBP9.81□□□□□ -0.84
SCLT1-202ENST00000439369 GNG7O60262 68 aa9.81□□□□□ -0.84
SCLT1-202ENST00000439369 IFNA5P01569 189 aa9.81□□□□□ -0.84
SCLT1-202ENST00000439369 IGLC1P0CG04 106 aa9.81□□□□□ -0.84
SCLT1-202ENST00000439369 CXCL2P19875 107 aa9.81□□□□□ -0.84
SCLT1-202ENST00000439369 SELENOTP62341 195 aa9.81□□□□□ -0.84
SCLT1-202ENST00000439369 MLANAQ16655 118 aa9.81□□□□□ -0.84
SCLT1-202ENST00000439369 Q56UQ5 140 aa9.81□□□□□ -0.84
SCLT1-202ENST00000439369 TEPPQ6URK8 271 aa9.81□□□□□ -0.84
SCLT1-202ENST00000439369 TREML4Q6UXN2 200 aa9.81□□□□□ -0.84
SCLT1-202ENST00000439369 C9orf62Q8N4C0 152 aa9.81□□□□□ -0.84
SCLT1-202ENST00000439369 NPIPB3Q92617 1050 aa9.81□□□□□ -0.84
SCLT1-202ENST00000439369 TRGV9Q99603 122 aa9.81□□□□□ -0.84
SCLT1-202ENST00000439369 CITED1Q99966 193 aa9.81□□□□□ -0.84
SCLT1-202ENST00000439369 CITED2Q99967 270 aaPredicted RBP9.81□□□□□ -0.84
SCLT1-202ENST00000439369 ARPC5LQ9BPX5 153 aa9.81□□□□□ -0.84
SCLT1-202ENST00000439369 ZNF747Q9BV97 191 aa9.81□□□□□ -0.84
SCLT1-202ENST00000439369 GNB4Q9HAV0 340 aa9.81□□□□□ -0.84
SCLT1-202ENST00000439369 PEF1Q9UBV8 284 aaKnown RBP9.81□□□□□ -0.84
SCLT1-202ENST00000439369 LSM4Q9Y4Z0 139 aaKnown RBP9.81□□□□□ -0.84
SCLT1-202ENST00000439369 NF1P21359 2839 aa9.8□□□□□ -0.84
SCLT1-202ENST00000439369 IGHV3-21A0A0B4J1V1 117 aa9.8□□□□□ -0.84
SCLT1-202ENST00000439369 KANTRA0A1W2PQU2 76 aa9.8□□□□□ -0.84
SCLT1-202ENST00000439369 SMCO3A2RU48 225 aa9.8□□□□□ -0.84
SCLT1-202ENST00000439369 TGOLN2O43493 480 aa9.8□□□□□ -0.84
SCLT1-202ENST00000439369 BCL2L11O43521 198 aa9.8□□□□□ -0.84
SCLT1-202ENST00000439369 JTBO76095 146 aa9.8□□□□□ -0.84
SCLT1-202ENST00000439369 CFDP00746 253 aaPredicted RBP9.8□□□□□ -0.84
SCLT1-202ENST00000439369 CLEC3BP05452 202 aa9.8□□□□□ -0.84
SCLT1-202ENST00000439369 CTSGP08311 255 aa9.8□□□□□ -0.84
SCLT1-202ENST00000439369 OR10J1P30954 320 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms