RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 TBC1D24Q9ULP9 559 aa9.97□□□□□ -0.81
LINC00399-201ENST00000439008 LYRM1O43325 122 aa9.96□□□□□ -0.82
LINC00399-201ENST00000439008 IGKV1-17P01599 117 aa9.96□□□□□ -0.82
LINC00399-201ENST00000439008 HOXB5P09067 269 aa9.96□□□□□ -0.82
LINC00399-201ENST00000439008 OR4E1P0C645 316 aa9.96□□□□□ -0.82
LINC00399-201ENST00000439008 HTR2BP41595 481 aa9.96□□□□□ -0.82
LINC00399-201ENST00000439008 ELLP55199 621 aaPredicted RBP9.96□□□□□ -0.82
LINC00399-201ENST00000439008 IFITM3Q01628 133 aa9.96□□□□□ -0.82
LINC00399-201ENST00000439008 GGNBP1Q5YKI7 109 aa9.96□□□□□ -0.82
LINC00399-201ENST00000439008 OR52B4Q8NGK2 314 aa9.96□□□□□ -0.82
LINC00399-201ENST00000439008 OR2K2Q8NGT1 345 aa9.96□□□□□ -0.82
LINC00399-201ENST00000439008 C7orf50Q9BRJ6 194 aaKnown RBP9.96□□□□□ -0.82
LINC00399-201ENST00000439008 C20orf24Q9BUV8 137 aa9.96□□□□□ -0.82
LINC00399-201ENST00000439008 TECRQ9NZ01 308 aaKnown RBP9.96□□□□□ -0.82
LINC00399-201ENST00000439008 IGHV3-49A0A0A0MS15 119 aa9.95□□□□□ -0.82
LINC00399-201ENST00000439008 DUXBA0A1W2PPF3 345 aa9.95□□□□□ -0.82
LINC00399-201ENST00000439008 GNG7O60262 68 aa9.95□□□□□ -0.82
LINC00399-201ENST00000439008 SCAF4O95104 1147 aaKnown RBP9.95□□□□□ -0.82
LINC00399-201ENST00000439008 APOHP02749 345 aaPredicted RBP9.95□□□□□ -0.82
LINC00399-201ENST00000439008 SUB1P53999 127 aaKnown RBP eCLIP9.95□□□□□ -0.82
LINC00399-201ENST00000439008 UBE2MP61081 183 aaKnown RBP9.95□□□□□ -0.82
LINC00399-201ENST00000439008 PRSS54Q6PEW0 395 aa9.95□□□□□ -0.82
LINC00399-201ENST00000439008 TOMM20LQ6UXN7 152 aa9.95□□□□□ -0.82
LINC00399-201ENST00000439008 LINC00299Q6ZSB3 139 aa9.95□□□□□ -0.82
LINC00399-201ENST00000439008 LYG2Q86SG7 212 aa9.95□□□□□ -0.82
LINC00399-201ENST00000439008 SLC24A4Q8NFF2 622 aa9.95□□□□□ -0.82
LINC00399-201ENST00000439008 OR1S1Q8NH92 325 aa9.95□□□□□ -0.82
LINC00399-201ENST00000439008 DTD1Q8TEA8 209 aa9.95□□□□□ -0.82
LINC00399-201ENST00000439008 OR10C1Q96KK4 312 aa9.95□□□□□ -0.82
LINC00399-201ENST00000439008 ZFAND3Q9H8U3 227 aa9.95□□□□□ -0.82
LINC00399-201ENST00000439008 DAZ1Q9NQZ3 744 aaKnown RBP9.95□□□□□ -0.82
LINC00399-201ENST00000439008 MRPL27Q9P0M9 148 aaKnown RBP9.95□□□□□ -0.82
LINC00399-201ENST00000439008 UFC1Q9Y3C8 167 aa9.95□□□□□ -0.82
LINC00399-201ENST00000439008 C15orf62A8K5M9 175 aa9.94□□□□□ -0.82
LINC00399-201ENST00000439008 K7EMT4 169 aa9.94□□□□□ -0.82
LINC00399-201ENST00000439008 NUPL2O15504 423 aaKnown RBP9.94□□□□□ -0.82
LINC00399-201ENST00000439008 IAPPP10997 89 aa9.94□□□□□ -0.82
LINC00399-201ENST00000439008 NPY1RP25929 384 aa9.94□□□□□ -0.82
LINC00399-201ENST00000439008 OPRK1P41145 380 aa9.94□□□□□ -0.82
LINC00399-201ENST00000439008 DCTN2Q13561 401 aaKnown RBP9.94□□□□□ -0.82
LINC00399-201ENST00000439008 GUCA2BQ16661 112 aa9.94□□□□□ -0.82
LINC00399-201ENST00000439008 LILRB2Q8N423 598 aa9.94□□□□□ -0.82
LINC00399-201ENST00000439008 DUSP18Q8NEJ0 188 aa9.94□□□□□ -0.82
LINC00399-201ENST00000439008 OR4X1Q8NH49 305 aa9.94□□□□□ -0.82
LINC00399-201ENST00000439008 CCDC32Q9BV29 185 aa9.94□□□□□ -0.82
LINC00399-201ENST00000439008 MAGT1Q9H0U3 335 aa9.94□□□□□ -0.82
LINC00399-201ENST00000439008 C20orf85Q9H1P6 137 aa9.94□□□□□ -0.82
LINC00399-201ENST00000439008 PALMDQ9NP74 551 aa9.94□□□□□ -0.82
LINC00399-201ENST00000439008 PTTG2Q9NZH5 202 aa9.94□□□□□ -0.82
LINC00399-201ENST00000439008 SMPXQ9UHP9 88 aa9.94□□□□□ -0.82
LINC00399-201ENST00000439008 TMED3Q9Y3Q3 217 aa9.94□□□□□ -0.82
LINC00399-201ENST00000439008 IGHV3OR16-13A0A075B7E8 117 aa9.93□□□□□ -0.82
LINC00399-201ENST00000439008 IGHV3-74A0A0B4J1X5 117 aa9.93□□□□□ -0.82
LINC00399-201ENST00000439008 CENPXA8MT69 81 aa9.93□□□□□ -0.82
LINC00399-201ENST00000439008 A8MZ25 164 aa9.93□□□□□ -0.82
LINC00399-201ENST00000439008 CLN5O75503 358 aa9.93□□□□□ -0.82
LINC00399-201ENST00000439008 TCRBP04435 133 aa9.93□□□□□ -0.82
LINC00399-201ENST00000439008 SLC25A6P12236 298 aa9.93□□□□□ -0.82
LINC00399-201ENST00000439008 NPBWR1P48145 328 aa9.93□□□□□ -0.82
LINC00399-201ENST00000439008 RND2P52198 227 aa9.93□□□□□ -0.82
LINC00399-201ENST00000439008 CD81P60033 236 aa9.93□□□□□ -0.82
LINC00399-201ENST00000439008 TIGITQ495A1 244 aa9.93□□□□□ -0.82
LINC00399-201ENST00000439008 DEFB125Q8N687 156 aa9.93□□□□□ -0.82
LINC00399-201ENST00000439008 MARC2Q969Z3 335 aa9.93□□□□□ -0.82
LINC00399-201ENST00000439008 NEURL2Q9BR09 285 aa9.93□□□□□ -0.82
LINC00399-201ENST00000439008 GAR1Q9NY12 217 aaKnown RBP9.93□□□□□ -0.82
LINC00399-201ENST00000439008 PUS1Q9Y606 427 aaKnown RBP eCLIP9.93□□□□□ -0.82
LINC00399-201ENST00000439008 TRAV6A0A075B6T7 132 aa9.92□□□□□ -0.82
LINC00399-201ENST00000439008 IGHV7-4-1A0A0J9YVY3 117 aa9.92□□□□□ -0.82
LINC00399-201ENST00000439008 RBMY1BA6NDE4 496 aaKnown RBP9.92□□□□□ -0.82
LINC00399-201ENST00000439008 RBMY1EA6NEQ0 496 aaKnown RBP9.92□□□□□ -0.82
LINC00399-201ENST00000439008 CORTO00230 105 aa9.92□□□□□ -0.82
LINC00399-201ENST00000439008 CHEK1O14757 476 aa9.92□□□□□ -0.82
LINC00399-201ENST00000439008 YIF1AO95070 293 aa9.92□□□□□ -0.82
LINC00399-201ENST00000439008 IFNA10P01566 189 aa9.92□□□□□ -0.82
LINC00399-201ENST00000439008 RBMY1DP0C7P1 496 aaKnown RBP9.92□□□□□ -0.82
LINC00399-201ENST00000439008 IGLC1P0CG04 106 aa9.92□□□□□ -0.82
LINC00399-201ENST00000439008 RELQ04864 619 aaPredicted RBP9.92□□□□□ -0.82
LINC00399-201ENST00000439008 LINC00322Q6ZN03 302 aaPredicted RBP9.92□□□□□ -0.82
LINC00399-201ENST00000439008 TMEM116Q8NCL8 245 aa9.92□□□□□ -0.82
LINC00399-201ENST00000439008 RNASEH2CQ8TDP1 164 aaKnown RBP9.92□□□□□ -0.82
LINC00399-201ENST00000439008 S100ZQ8WXG8 99 aa9.92□□□□□ -0.82
LINC00399-201ENST00000439008 CITED4Q96RK1 184 aa9.92□□□□□ -0.82
LINC00399-201ENST00000439008 RNF2Q99496 336 aa9.92□□□□□ -0.82
LINC00399-201ENST00000439008 SEC22CQ9BRL7 303 aa9.92□□□□□ -0.82
LINC00399-201ENST00000439008 HIPK2Q9H2X6 1198 aa9.92□□□□□ -0.82
LINC00399-201ENST00000439008 ID3Q02535 119 aa9.91□□□□□ -0.82
LINC00399-201ENST00000439008 C4orf46Q504U0 113 aa9.91□□□□□ -0.82
LINC00399-201ENST00000439008 FAM90A2PQ658T7 463 aa9.91□□□□□ -0.82
LINC00399-201ENST00000439008 ZNF600Q6ZNG1 722 aa9.91□□□□□ -0.82
LINC00399-201ENST00000439008 GTSCR1Q86UQ5 136 aa9.91□□□□□ -0.82
LINC00399-201ENST00000439008 OR4D5Q8NGN0 318 aa9.91□□□□□ -0.82
LINC00399-201ENST00000439008 NPIPB3Q92617 1050 aa9.91□□□□□ -0.82
LINC00399-201ENST00000439008 RHPN1-AS1Q9BWJ2 59 aa9.91□□□□□ -0.82
LINC00399-201ENST00000439008 NUDT15Q9NV35 164 aa9.91□□□□□ -0.82
LINC00399-201ENST00000439008 U3KQ87 197 aa9.91□□□□□ -0.82
LINC00399-201ENST00000439008 IGKV1D-37A0A075B6S9 117 aa9.9□□□□□ -0.82
LINC00399-201ENST00000439008 TRAV25A0A0B4J276 109 aa9.9□□□□□ -0.82
LINC00399-201ENST00000439008 IGHV3-66A0A0C4DH42 116 aa9.9□□□□□ -0.82
LINC00399-201ENST00000439008 OR11H12B2RN74 326 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms