RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 SLC17A3O00476 420 aa11.25□□□□□ -0.61
PTCHD3-201ENST00000438700 UPK2O00526 184 aa11.25□□□□□ -0.61
PTCHD3-201ENST00000438700 LCN2P80188 198 aa11.25□□□□□ -0.61
PTCHD3-201ENST00000438700 POU2AF1Q16633 256 aa11.25□□□□□ -0.61
PTCHD3-201ENST00000438700 C11orf71Q6IPW1 123 aa11.25□□□□□ -0.61
PTCHD3-201ENST00000438700 OR10W1Q8NGF6 305 aa11.25□□□□□ -0.61
PTCHD3-201ENST00000438700 VN1R17PQ8TDU5 208 aa11.25□□□□□ -0.61
PTCHD3-201ENST00000438700 HARBI1Q96MB7 349 aa11.25□□□□□ -0.61
PTCHD3-201ENST00000438700 VENTXO95231 258 aa11.24□□□□□ -0.61
PTCHD3-201ENST00000438700 RPLP1P05386 114 aaKnown RBP11.24□□□□□ -0.61
PTCHD3-201ENST00000438700 TPTE2P1Q5T6R2 138 aa11.24□□□□□ -0.61
PTCHD3-201ENST00000438700 RAB1BQ9H0U4 201 aa11.24□□□□□ -0.61
PTCHD3-201ENST00000438700 SERF1AO75920 110 aa11.24□□□□□ -0.61
PTCHD3-201ENST00000438700 ACTL6BO94805 426 aa11.24□□□□□ -0.61
PTCHD3-201ENST00000438700 STAG3L2P0CL84 134 aa11.24□□□□□ -0.61
PTCHD3-201ENST00000438700 STAG3L3P0CL85 134 aa11.24□□□□□ -0.61
PTCHD3-201ENST00000438700 PRCDQ00LT1 54 aa11.24□□□□□ -0.61
PTCHD3-201ENST00000438700 ZNF833PQ6ZTB9 187 aa11.24□□□□□ -0.61
PTCHD3-201ENST00000438700 SFRP2Q96HF1 295 aa11.24□□□□□ -0.61
PTCHD3-201ENST00000438700 HSPB9Q9BQS6 159 aa11.24□□□□□ -0.61
PTCHD3-201ENST00000438700 TEX50A0A1B0GTY4 177 aa11.23□□□□□ -0.61
PTCHD3-201ENST00000438700 PDE6DO43924 150 aa11.23□□□□□ -0.61
PTCHD3-201ENST00000438700 BRS3P32247 399 aa11.23□□□□□ -0.61
PTCHD3-201ENST00000438700 MLANAQ16655 118 aa11.23□□□□□ -0.61
PTCHD3-201ENST00000438700 HLA-DRB5Q30154 266 aa11.23□□□□□ -0.61
PTCHD3-201ENST00000438700 TMEM30BQ3MIR4 351 aa11.23□□□□□ -0.61
PTCHD3-201ENST00000438700 OR10X1Q8NGY0 326 aa11.23□□□□□ -0.61
PTCHD3-201ENST00000438700 SCO2A0A1W2PP80 73 aa11.23□□□□□ -0.61
PTCHD3-201ENST00000438700 H0YJW9 148 aa11.23□□□□□ -0.61
PTCHD3-201ENST00000438700 FOXH1O75593 365 aa11.23□□□□□ -0.61
PTCHD3-201ENST00000438700 CXorf1O96002 111 aa11.23□□□□□ -0.61
PTCHD3-201ENST00000438700 OCC1Q8TAD7 63 aa11.23□□□□□ -0.61
PTCHD3-201ENST00000438700 LPAR2Q9HBW0 351 aa11.23□□□□□ -0.61
PTCHD3-201ENST00000438700 APOA2P02652 100 aa11.22□□□□□ -0.61
PTCHD3-201ENST00000438700 GATA2P23769 480 aaPredicted RBP11.22□□□□□ -0.61
PTCHD3-201ENST00000438700 DMRTA1Q5VZB9 504 aa11.22□□□□□ -0.61
PTCHD3-201ENST00000438700 KCNIP2Q9NS61 270 aa11.22□□□□□ -0.61
PTCHD3-201ENST00000438700 ZNF257Q9Y2Q1 563 aa11.22□□□□□ -0.61
PTCHD3-201ENST00000438700 IGKV1OR2-108A0A075B7D4 117 aa11.22□□□□□ -0.61
PTCHD3-201ENST00000438700 SPINK4O60575 86 aa11.22□□□□□ -0.61
PTCHD3-201ENST00000438700 FOXL1Q12952 345 aa11.22□□□□□ -0.61
PTCHD3-201ENST00000438700 RAB31Q13636 194 aa11.22□□□□□ -0.61
PTCHD3-201ENST00000438700 FAM103A1Q9BTL3 118 aaKnown RBP11.22□□□□□ -0.61
PTCHD3-201ENST00000438700 BET1LQ9NYM9 111 aa11.22□□□□□ -0.61
PTCHD3-201ENST00000438700 YTHDF2Q9Y5A9 579 aaKnown RBP11.22□□□□□ -0.61
PTCHD3-201ENST00000438700 E7EUB6 86 aa11.21□□□□□ -0.61
PTCHD3-201ENST00000438700 DLX1P56177 255 aa11.21□□□□□ -0.61
PTCHD3-201ENST00000438700 PRB3Q04118 309 aaPredicted RBP11.21□□□□□ -0.61
PTCHD3-201ENST00000438700 TMEM249Q2WGJ8 235 aa11.21□□□□□ -0.61
PTCHD3-201ENST00000438700 DTX2Q86UW9 622 aa11.21□□□□□ -0.61
PTCHD3-201ENST00000438700 OR4P4Q8NGL7 312 aa11.21□□□□□ -0.61
PTCHD3-201ENST00000438700 MIEN1Q9BRT3 115 aa11.21□□□□□ -0.61
PTCHD3-201ENST00000438700 MALRD1Q5VYJ5 2156 aa11.21□□□□□ -0.61
PTCHD3-201ENST00000438700 F6UZH7 168 aa11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 PRB1P04280 392 aa11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 GCHFRP30047 84 aa11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 COMPP49747 757 aaPredicted RBP11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 RHOBP62745 196 aa11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 RELQ04864 619 aaPredicted RBP11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 C10orf55Q5SWW7 151 aa11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 FLYWCH2Q96CP2 140 aaKnown RBP11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 COMMD5Q9GZQ3 224 aa11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 UBTD1Q9HAC8 227 aa11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 SPTAN1Q13813 2472 aaKnown RBP11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 MDFIC2A0A1B0GVS7 189 aa11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 K7EN84 100 aa11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 PRR20EP86478 221 aa11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 PRR20CP86479 221 aa11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 PRR20DP86480 221 aa11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 PRR20BP86481 221 aa11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 PRR20AP86496 221 aa11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 OR5I1Q13606 314 aa11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 TEX43Q6ZNM6 134 aa11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 MIR17HGQ75NE6 70 aa11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 OR5AN1Q8NGI8 311 aa11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 OR5B3Q8NH48 314 aa11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 OSR1Q8TAX0 266 aaPredicted RBP11.2□□□□□ -0.62
PTCHD3-201ENST00000438700 FSTL3O95633 263 aa11.19□□□□□ -0.62
PTCHD3-201ENST00000438700 CRISP2P16562 243 aa11.19□□□□□ -0.62
PTCHD3-201ENST00000438700 YPEL3P61236 119 aaPredicted RBP11.19□□□□□ -0.62
PTCHD3-201ENST00000438700 RPL8P62917 257 aaKnown RBP11.19□□□□□ -0.62
PTCHD3-201ENST00000438700 ZNF90Q03938 601 aa11.19□□□□□ -0.62
PTCHD3-201ENST00000438700 TMEM155Q4W5P6 130 aa11.19□□□□□ -0.62
PTCHD3-201ENST00000438700 OR9G1Q8NH87 305 aa11.19□□□□□ -0.62
PTCHD3-201ENST00000438700 MRPL18Q9H0U6 180 aaKnown RBP11.19□□□□□ -0.62
PTCHD3-201ENST00000438700 FLNCQ14315 2725 aa11.19□□□□□ -0.62
PTCHD3-201ENST00000438700 LINC00869P0C866 280 aa11.19□□□□□ -0.62
PTCHD3-201ENST00000438700 RNASE2P10153 161 aaKnown RBP11.19□□□□□ -0.62
PTCHD3-201ENST00000438700 DLX6P56179 175 aa11.19□□□□□ -0.62
PTCHD3-201ENST00000438700 ZNF841Q6ZN19 808 aa11.19□□□□□ -0.62
PTCHD3-201ENST00000438700 NEU4Q8WWR8 484 aaPredicted RBP11.19□□□□□ -0.62
PTCHD3-201ENST00000438700 BBC3Q96PG8 261 aaPredicted RBP11.19□□□□□ -0.62
PTCHD3-201ENST00000438700 FBXL7Q9UJT9 491 aa11.19□□□□□ -0.62
PTCHD3-201ENST00000438700 IGHV3-72A0A0B4J1Y9 119 aa11.18□□□□□ -0.62
PTCHD3-201ENST00000438700 IER3P46695 156 aa11.18□□□□□ -0.62
PTCHD3-201ENST00000438700 SLC35B1P78383 322 aa11.18□□□□□ -0.62
PTCHD3-201ENST00000438700 KIAA1644Q3SXP7 199 aa11.18□□□□□ -0.62
PTCHD3-201ENST00000438700 OR10G8Q8NGN5 311 aa11.18□□□□□ -0.62
PTCHD3-201ENST00000438700 OR4C13Q8NGP0 309 aa11.18□□□□□ -0.62
PTCHD3-201ENST00000438700 NABP2Q9BQ15 211 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms