RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 OR2J3O76001 311 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 PYYP10082 97 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 CD33P20138 364 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 GPR6P46095 362 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-205ENST00000438362 HOXA4Q00056 320 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-205ENST00000438362 ZFP30Q9Y2G7 519 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 FOXH1O75593 365 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 CD59P13987 128 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 FCGR2BP31994 310 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-205ENST00000438362 TMEM97Q5BJF2 176 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 OR10AG1Q8NH19 301 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 TMUB1Q9BVT8 246 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 RPP21Q9H633 154 aaKnown RBP5.52□□□□□ -1.53
CSDE1-205ENST00000438362 PLSCR4Q9NRQ2 329 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 AP5S1Q9NUS5 200 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 HILPDAQ9Y5L2 63 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 OR4C46A6NHA9 309 aa5.51□□□□□ -1.53
CSDE1-205ENST00000438362 CA1P00915 261 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-205ENST00000438362 FOXC1Q12948 553 aa5.51□□□□□ -1.53
CSDE1-205ENST00000438362 C2orf83Q53S99 150 aa5.51□□□□□ -1.53
CSDE1-205ENST00000438362 LEMD1Q68G75 181 aa5.51□□□□□ -1.53
CSDE1-205ENST00000438362 FAM53AQ6NSI3 398 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-205ENST00000438362 OR4A5Q8NH83 315 aa5.51□□□□□ -1.53
CSDE1-205ENST00000438362 FGF23Q9GZV9 251 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-205ENST00000438362 SOX21Q9Y651 276 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-205ENST00000438362 IGKV1D-17A0A075B6S4 117 aa5.51□□□□□ -1.53
CSDE1-205ENST00000438362 TCRBV4S1A1TA0A5B7 111 aa5.51□□□□□ -1.53
CSDE1-205ENST00000438362 IGKV3-15P01624 115 aa5.51□□□□□ -1.53
CSDE1-205ENST00000438362 KRTAP27-1Q3LI81 207 aa5.51□□□□□ -1.53
CSDE1-205ENST00000438362 OR10W1Q8NGF6 305 aa5.51□□□□□ -1.53
CSDE1-205ENST00000438362 CLEC7AQ9BXN2 247 aa5.51□□□□□ -1.53
CSDE1-205ENST00000438362 C17orf100A8MU93 164 aa5.51□□□□□ -1.53
CSDE1-205ENST00000438362 K7ERU9 68 aa5.51□□□□□ -1.53
CSDE1-205ENST00000438362 CKS2P33552 79 aa5.51□□□□□ -1.53
CSDE1-205ENST00000438362 GNG5P63218 68 aa5.51□□□□□ -1.53
CSDE1-205ENST00000438362 RNFT1Q5M7Z0 435 aa5.51□□□□□ -1.53
CSDE1-205ENST00000438362 CCDC144NLQ6NUI1 221 aa5.51□□□□□ -1.53
CSDE1-205ENST00000438362 SSBP4Q9BWG4 385 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-205ENST00000438362 EPDR1Q9UM22 224 aa5.51□□□□□ -1.53
CSDE1-205ENST00000438362 UFC1Q9Y3C8 167 aa5.51□□□□□ -1.53
CSDE1-205ENST00000438362 MUC22E2RYF6 1773 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-205ENST00000438362 TRAV5A0A0B4J249 113 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 PPIAL4CA0A0B4J2A2 164 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 OR2T8A6NH00 312 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 PPIAL4GP0DN37 164 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 BMI1P35226 326 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 CX3CL1P78423 397 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 CDPF1Q6NVV7 123 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 RBPMS2Q6ZRY4 209 aaKnown RBP5.5□□□□□ -1.53
CSDE1-205ENST00000438362 TCF24Q7RTU0 167 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 TMEM116Q8NCL8 245 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 FMC1Q96HJ9 113 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 COL25A1Q9BXS0 654 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-205ENST00000438362 RALYQ9UKM9 306 aaKnown RBP5.5□□□□□ -1.53
CSDE1-205ENST00000438362 IGHV1-69-2A0A0G2JMI3 117 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 A0A1B0GUS0 222 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 A0A1B0GUT8 65 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 MYOD1P15172 320 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 MFAP4P55083 255 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 SLC25A33Q9BSK2 321 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 ABCA4P78363 2273 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 F2RL2O00254 374 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 EREGO14944 169 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 GOSR1O95249 250 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 IGHV1-46P01743 117 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 IL4P05112 153 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 NMUP48645 174 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 TWIST1Q15672 202 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 CENPVQ7Z7K6 275 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-205ENST00000438362 Q9H3A6 140 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 FBXL15Q9H469 300 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 SLC25A15Q9Y619 301 aa5.5□□□□□ -1.53
CSDE1-205ENST00000438362 TMEM131Q92545 1883 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 TRAV30A0A087WSZ9 112 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 TRAV9-2A0A087WT02 112 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 TFPI2P48307 235 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 TCTAP57738 103 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 TSKUQ8WUA8 353 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 SPTAN1Q13813 2472 aaKnown RBP5.49□□□□□ -1.53
CSDE1-205ENST00000438362 PCNX2A6NKB5 2137 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 GTF3C1Q12789 2109 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 GAGE10A6NGK3 116 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 FNDC10F2Z333 226 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 NUDT3O95989 172 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 IGHG3P01860 377 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 GPX1P07203 203 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 SMIM17P0DL12 118 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 RPL7P18124 248 aaKnown RBP5.49□□□□□ -1.53
CSDE1-205ENST00000438362 VDAC2P45880 294 aaPredicted RBP5.49□□□□□ -1.53
CSDE1-205ENST00000438362 UQCRFS1P47985 274 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 PCP4P48539 62 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 RPL24P83731 157 aaKnown RBP5.49□□□□□ -1.53
CSDE1-205ENST00000438362 C10orf55Q5SWW7 151 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 CRIP3Q6Q6R5 217 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 TMEM136Q6ZRR5 245 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 ZCCHC24Q8N2G6 241 aaKnown RBP5.49□□□□□ -1.53
CSDE1-205ENST00000438362 NUDT10Q8NFP7 164 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 ST6GALNAC6Q969X2 333 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 NUDT11Q96G61 164 aa5.49□□□□□ -1.53
CSDE1-205ENST00000438362 PYGO2Q9BRQ0 406 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms