RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 PRR31Q5SQ13 230 aa7.69□□□□□ -1.18
CUX1-206ENST00000437600 RUSC1-AS1Q66K80 236 aa7.69□□□□□ -1.18
CUX1-206ENST00000437600 OR4X1Q8NH49 305 aa7.69□□□□□ -1.18
CUX1-206ENST00000437600 FAM222BQ8WU58 562 aa7.69□□□□□ -1.18
CUX1-206ENST00000437600 ITLN2Q8WWU7 325 aaPredicted RBP7.69□□□□□ -1.18
CUX1-206ENST00000437600 NEIL1Q96FI4 390 aaPredicted RBP7.69□□□□□ -1.18
CUX1-206ENST00000437600 TPSG1Q9NRR2 321 aa7.69□□□□□ -1.18
CUX1-206ENST00000437600 APCP25054 2843 aa7.69□□□□□ -1.18
CUX1-206ENST00000437600 TRAV5A0A0B4J249 113 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 SLC17A3O00476 420 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 PFN1P07737 140 aaKnown RBP7.68□□□□□ -1.18
CUX1-206ENST00000437600 RAB7AP51149 207 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 OR5I1Q13606 314 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 MORN5Q5VZ52 161 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 TEPPQ6URK8 271 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 CYP2G1PQ6ZSU1 146 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 TMEM183AQ8IXX5 376 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 NUDT10Q8NFP7 164 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 OR10X1Q8NGY0 326 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 RNASE8Q8TDE3 154 aaKnown RBP7.68□□□□□ -1.18
CUX1-206ENST00000437600 HARBI1Q96MB7 349 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 UHRF2Q96PU4 802 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 GSX1Q9H4S2 264 aaPredicted RBP7.68□□□□□ -1.18
CUX1-206ENST00000437600 TMEM14BQ9NUH8 114 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 hADV38S2A0JD32 116 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 PNRC1Q12796 327 aaPredicted RBP7.68□□□□□ -1.18
CUX1-206ENST00000437600 TCTEX1D1Q8N7M0 179 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 SGK494Q96LW2 274 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 FUT9Q9Y231 359 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 ZNF469Q96JG9 3925 aaPredicted RBP7.68□□□□□ -1.18
CUX1-206ENST00000437600 A6NNC1 897 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 C22orf46C9J442 243 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 CNTFRP26992 372 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 APOBEC3AP31941 199 aaPredicted RBP7.68□□□□□ -1.18
CUX1-206ENST00000437600 SLC35B1P78383 322 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 HCP5Q6MZN7 132 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 SLC25A48Q6ZT89 311 aaKnown RBP7.68□□□□□ -1.18
CUX1-206ENST00000437600 OCC1Q8TAD7 63 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 ZNF714Q96N38 554 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 PLEKHA3Q9HB20 300 aa7.68□□□□□ -1.18
CUX1-206ENST00000437600 IGHV1-69-2A0A0G2JMI3 117 aa7.67□□□□□ -1.18
CUX1-206ENST00000437600 A1L4Q6 167 aa7.67□□□□□ -1.18
CUX1-206ENST00000437600 M0R143 59 aa7.67□□□□□ -1.18
CUX1-206ENST00000437600 CD24P25063 80 aa7.67□□□□□ -1.18
CUX1-206ENST00000437600 OR10J1P30954 320 aa7.67□□□□□ -1.18
CUX1-206ENST00000437600 PSG5Q15238 335 aa7.67□□□□□ -1.18
CUX1-206ENST00000437600 LINC01551Q86U37 167 aa7.67□□□□□ -1.18
CUX1-206ENST00000437600 LINC00479Q96M42 142 aa7.67□□□□□ -1.18
CUX1-206ENST00000437600 SERTM2A0A1B0GWG4 89 aa7.67□□□□□ -1.18
CUX1-206ENST00000437600 A0A1W2PN81 502 aa7.67□□□□□ -1.18
CUX1-206ENST00000437600 A0A1W2PRD5 423 aa7.67□□□□□ -1.18
CUX1-206ENST00000437600 A0A1W2PRF3 423 aa7.67□□□□□ -1.18
CUX1-206ENST00000437600 A0A1W2PRM7 423 aa7.67□□□□□ -1.18
CUX1-206ENST00000437600 B4DEV8 164 aa7.67□□□□□ -1.18
CUX1-206ENST00000437600 SLC25A17O43808 307 aa7.67□□□□□ -1.18
CUX1-206ENST00000437600 HRASP01112 189 aa7.67□□□□□ -1.18
CUX1-206ENST00000437600 PAX5Q02548 391 aa7.67□□□□□ -1.18
CUX1-206ENST00000437600 HLA-DRB5Q30154 266 aa7.67□□□□□ -1.18
CUX1-206ENST00000437600 SMIM15Q7Z3B0 74 aa7.67□□□□□ -1.18
CUX1-206ENST00000437600 NHLRC2Q8NBF2 726 aa7.67□□□□□ -1.18
CUX1-206ENST00000437600 OR1P1Q8NH06 330 aa7.67□□□□□ -1.18
CUX1-206ENST00000437600 CCDC168Q8NDH2 2452 aa7.66□□□□□ -1.18
CUX1-206ENST00000437600 XKRY2A2RUG3 117 aa7.66□□□□□ -1.18
CUX1-206ENST00000437600 NKX6-3A6NJ46 265 aa7.66□□□□□ -1.18
CUX1-206ENST00000437600 PPP5D1E7EU14 171 aa7.66□□□□□ -1.18
CUX1-206ENST00000437600 TMEM250H0YL14 139 aa7.66□□□□□ -1.18
CUX1-206ENST00000437600 UPK2O00526 184 aa7.66□□□□□ -1.18
CUX1-206ENST00000437600 OR7C2O60412 319 aa7.66□□□□□ -1.18
CUX1-206ENST00000437600 CD33P20138 364 aa7.66□□□□□ -1.18
CUX1-206ENST00000437600 OPRK1P41145 380 aa7.66□□□□□ -1.18
CUX1-206ENST00000437600 TEX36Q5VZQ5 186 aa7.66□□□□□ -1.18
CUX1-206ENST00000437600 S100A7AQ86SG5 101 aa7.66□□□□□ -1.18
CUX1-206ENST00000437600 OR5B12Q96R08 314 aa7.66□□□□□ -1.18
CUX1-206ENST00000437600 COMMD5Q9GZQ3 224 aa7.66□□□□□ -1.18
CUX1-206ENST00000437600 LSM4Q9Y4Z0 139 aaKnown RBP7.66□□□□□ -1.18
CUX1-206ENST00000437600 A0A1W2PPR1 153 aa7.66□□□□□ -1.18
CUX1-206ENST00000437600 ZNF320A2RRD8 509 aa7.66□□□□□ -1.18
CUX1-206ENST00000437600 NDUFB3O43676 98 aa7.66□□□□□ -1.18
CUX1-206ENST00000437600 RND2P52198 227 aa7.66□□□□□ -1.18
CUX1-206ENST00000437600 ZNF90Q03938 601 aa7.66□□□□□ -1.18
CUX1-206ENST00000437600 RTL8BQ17RB0 113 aa7.66□□□□□ -1.18
CUX1-206ENST00000437600 SGMS2Q8NHU3 365 aa7.66□□□□□ -1.18
CUX1-206ENST00000437600 RNASEH2CQ8TDP1 164 aaKnown RBP7.66□□□□□ -1.18
CUX1-206ENST00000437600 FLYWCH2Q96CP2 140 aaKnown RBP7.66□□□□□ -1.18
CUX1-206ENST00000437600 MRPL36Q9P0J6 103 aaKnown RBP7.66□□□□□ -1.18
CUX1-206ENST00000437600 H3BTX0 84 aa7.65□□□□□ -1.18
CUX1-206ENST00000437600 LINC00869P0C866 280 aa7.65□□□□□ -1.18
CUX1-206ENST00000437600 STAG3L2P0CL84 134 aa7.65□□□□□ -1.18
CUX1-206ENST00000437600 STAG3L3P0CL85 134 aa7.65□□□□□ -1.18
CUX1-206ENST00000437600 CRYBB3P26998 211 aa7.65□□□□□ -1.18
CUX1-206ENST00000437600 RPL29P47914 159 aaKnown RBP7.65□□□□□ -1.18
CUX1-206ENST00000437600 TEX38Q6PEX7 206 aa7.65□□□□□ -1.18
CUX1-206ENST00000437600 MRPL41Q8IXM3 137 aaKnown RBP7.65□□□□□ -1.18
CUX1-206ENST00000437600 OR52E5Q8NH55 327 aa7.65□□□□□ -1.18
CUX1-206ENST00000437600 IMMP2LQ96T52 175 aa7.65□□□□□ -1.18
CUX1-206ENST00000437600 NABP2Q9BQ15 211 aa7.65□□□□□ -1.18
CUX1-206ENST00000437600 MANBALQ9NQG1 85 aa7.65□□□□□ -1.18
CUX1-206ENST00000437600 LINC00312Q9Y6C7 94 aa7.65□□□□□ -1.18
CUX1-206ENST00000437600 H0YJW9 148 aa7.65□□□□□ -1.18
CUX1-206ENST00000437600 NDUFS7O75251 213 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms