RNA–Protein interactions for RNA: ENST00000437034.6

CAST-209, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 3,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-209ENST00000437034 LTBP2Q14767 1821 aa4.32□□□□□ -1.72
CAST-209ENST00000437034 TRAV8-2A0A0B4J237 113 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 TRAV4A0A0B4J268 109 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 RBAKDNA6NC62 111 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 LY6LH3BQJ8 138 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 WISP2O76076 250 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 LYPD3O95274 346 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 IL5P05113 134 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 CD55P08174 381 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 COX5AP20674 150 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 SSR2P43308 183 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 LEG1Q6P5S2 330 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 STPG3Q8N7X2 389 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 OR51H1Q8NH63 302 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 GPX7Q96SL4 187 aaPredicted RBP4.31□□□□□ -1.72
CAST-209ENST00000437034 KRTAP3-3Q9BYR6 98 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 KRTAP3-2Q9BYR7 98 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 PLA2G2FQ9BZM2 168 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 FER1L5A0AVI2 2057 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 EP400Q96L91 3159 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 TRAV1-1A0A0B4J248 108 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 TLCD2A6NGC4 264 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 EPPINO95925 133 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 CGAP01215 116 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 FGF1P05230 155 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 Q56UQ5 140 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 C20orf204Q6ZNR8 217 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 TRAPPC6BQ86SZ2 158 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 ZNF441Q8N8Z8 693 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 OR5H2Q8NGV7 314 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 ATP6V0E2Q8NHE4 81 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 LMX1AQ8TE12 382 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 ANAPC10Q9UM13 185 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 ZNF256Q9Y2P7 627 aaPredicted RBP4.31□□□□□ -1.72
CAST-209ENST00000437034 DSPPQ9NZW4 1301 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 PYYP10082 97 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 CBLN1P23435 193 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 CSN1S1P47710 185 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 ERVK-16P61578 105 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 POU3F1Q03052 451 aaPredicted RBP4.31□□□□□ -1.72
CAST-209ENST00000437034 SRSF9Q13242 221 aaKnown RBP eCLIP4.31□□□□□ -1.72
CAST-209ENST00000437034 MORN3Q6PF18 240 aaPredicted RBP4.31□□□□□ -1.72
CAST-209ENST00000437034 BAGE3Q86Y29 109 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 BAGE2Q86Y30 109 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 FAM19A4Q96LR4 140 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 METTL26Q96S19 204 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 MANBALQ9NQG1 85 aa4.31□□□□□ -1.72
CAST-209ENST00000437034 C3orf85A0A1B0GTC6 90 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 ETV2O00321 342 aaPredicted RBP4.3□□□□□ -1.72
CAST-209ENST00000437034 LINC00869P0C866 280 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 FUT5Q11128 374 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 FOXF1Q12946 379 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 MLF2Q15773 248 aaPredicted RBP4.3□□□□□ -1.72
CAST-209ENST00000437034 MS4A13Q5J8X5 152 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 MRGPREQ86SM8 312 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 KCNS1Q96KK3 526 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 TMEM242Q9NWH2 141 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 KCNE3Q9Y6H6 103 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 KIAA1549Q9HCM3 1950 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 TEX50A0A1B0GTY4 177 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 C5orf49A4QMS7 147 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 RBMY1BA6NDE4 496 aaKnown RBP4.3□□□□□ -1.72
CAST-209ENST00000437034 RBMY1EA6NEQ0 496 aaKnown RBP4.3□□□□□ -1.72
CAST-209ENST00000437034 C17orf112F2Z3M2 114 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 PITX3O75364 302 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 ZNF737O75373 536 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 RBMY1DP0C7P1 496 aaKnown RBP4.3□□□□□ -1.72
CAST-209ENST00000437034 RBMY1A1P0DJD3 496 aaKnown RBP4.3□□□□□ -1.72
CAST-209ENST00000437034 RRN3P1Q2M238 152 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 ZNF324BQ6AW86 544 aaPredicted RBP4.3□□□□□ -1.72
CAST-209ENST00000437034 SPATA12Q7Z6I5 190 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 TMEM179BQ7Z7N9 219 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 RNF182Q8N6D2 247 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 APOBEC4Q8WW27 367 aaKnown RBP4.3□□□□□ -1.72
CAST-209ENST00000437034 LSM10Q969L4 123 aaKnown RBP4.3□□□□□ -1.72
CAST-209ENST00000437034 DCTN5Q9BTE1 182 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 PAXXQ9BUH6 204 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 POLR2J2Q9GZM3 115 aaKnown RBP4.3□□□□□ -1.72
CAST-209ENST00000437034 ESM1Q9NQ30 184 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 TRAV14DV4A0A0A6YYC5 116 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 A8MWL6 223 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 FAM90A26D6RGX4 464 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 NUPR1O60356 82 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 PPICP45877 212 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 FAM182BQ5T319 152 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 POP5Q969H6 163 aaKnown RBP4.3□□□□□ -1.72
CAST-209ENST00000437034 AICDAQ9GZX7 198 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 SMDT1Q9H4I9 107 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 TNFRSF19Q9NS68 423 aa4.3□□□□□ -1.72
CAST-209ENST00000437034 LOC285095A0A1B0GVY8 99 aa4.29□□□□□ -1.72
CAST-209ENST00000437034 SRSF10O75494 262 aaKnown RBP4.29□□□□□ -1.72
CAST-209ENST00000437034 IGLL1P15814 213 aa4.29□□□□□ -1.72
CAST-209ENST00000437034 PLA2G2CQ5R387 149 aa4.29□□□□□ -1.72
CAST-209ENST00000437034 LINC00305Q7Z4B0 112 aa4.29□□□□□ -1.72
CAST-209ENST00000437034 PPDPFLQ8WWR9 84 aa4.29□□□□□ -1.72
CAST-209ENST00000437034 PGLYRP2Q96PD5 576 aa4.29□□□□□ -1.72
CAST-209ENST00000437034 KLF13Q9Y2Y9 288 aaPredicted RBP4.29□□□□□ -1.72
CAST-209ENST00000437034 TDRD6O60522 2096 aaKnown RBP4.29□□□□□ -1.72
CAST-209ENST00000437034 LGALS2P05162 132 aa4.29□□□□□ -1.72
CAST-209ENST00000437034 ZNF688P0C7X2 276 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms