RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 ZNF486Q96H40 463 aaPredicted RBP3.24□□□□□ -1.89
LINC01239-202ENST00000436786 CMTM3Q96MX0 182 aa3.24□□□□□ -1.89
LINC01239-202ENST00000436786 ATP6V0BQ99437 205 aa3.24□□□□□ -1.89
LINC01239-202ENST00000436786 ZNF2Q9BSG1 426 aaPredicted RBP3.24□□□□□ -1.89
LINC01239-202ENST00000436786 DIABLOQ9NR28 239 aa3.24□□□□□ -1.89
LINC01239-202ENST00000436786 EHFQ9NZC4 300 aa3.24□□□□□ -1.89
LINC01239-202ENST00000436786 RAB26Q9ULW5 256 aa3.24□□□□□ -1.89
LINC01239-202ENST00000436786 TRAV14DV4A0A0A6YYC5 116 aa3.23□□□□□ -1.89
LINC01239-202ENST00000436786 I3L2K1 104 aa3.23□□□□□ -1.89
LINC01239-202ENST00000436786 APOHP02749 345 aaPredicted RBP3.23□□□□□ -1.89
LINC01239-202ENST00000436786 IFNA4P05014 189 aa3.23□□□□□ -1.89
LINC01239-202ENST00000436786 RBMS2Q15434 407 aaKnown RBP3.23□□□□□ -1.89
LINC01239-202ENST00000436786 FAM90A2PQ658T7 463 aa3.23□□□□□ -1.89
LINC01239-202ENST00000436786 CDPF1Q6NVV7 123 aa3.23□□□□□ -1.89
LINC01239-202ENST00000436786 TSPAN14Q8NG11 270 aa3.23□□□□□ -1.89
LINC01239-202ENST00000436786 OR1P1Q8NH06 330 aa3.23□□□□□ -1.89
LINC01239-202ENST00000436786 FCGR1BQ92637 280 aa3.23□□□□□ -1.89
LINC01239-202ENST00000436786 OR10C1Q96KK4 312 aa3.23□□□□□ -1.89
LINC01239-202ENST00000436786 TMEM56Q96MV1 263 aa3.23□□□□□ -1.89
LINC01239-202ENST00000436786 MFFQ9GZY8 342 aa3.23□□□□□ -1.89
LINC01239-202ENST00000436786 RBM38Q9H0Z9 239 aaKnown RBP3.23□□□□□ -1.89
LINC01239-202ENST00000436786 C11orf68Q9H3H3 251 aaKnown RBP3.23□□□□□ -1.89
LINC01239-202ENST00000436786 IFT46Q9NQC8 304 aa3.23□□□□□ -1.89
LINC01239-202ENST00000436786 PRNDQ9UKY0 176 aa3.23□□□□□ -1.89
LINC01239-202ENST00000436786 NUPL2O15504 423 aaKnown RBP3.22□□□□□ -1.89
LINC01239-202ENST00000436786 XRCC3O43542 346 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 CLN5O75503 358 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 MT-CO2P00403 227 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 CA1P00915 261 aaPredicted RBP3.22□□□□□ -1.89
LINC01239-202ENST00000436786 AP2S1P53680 142 aaPredicted RBP3.22□□□□□ -1.89
LINC01239-202ENST00000436786 MFAP4P55083 255 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 TRIM16LQ309B1 348 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 PHLDA2Q53GA4 152 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 LEMD1Q68G75 181 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 CFAP161Q6P656 301 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 TCF24Q7RTU0 167 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 LYSMD2Q8IV50 215 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 CMTM1Q8IZ96 169 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 OR5H2Q8NGV7 314 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 C2CD4CQ8TF44 421 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 S100A16Q96FQ6 103 aaKnown RBP3.22□□□□□ -1.89
LINC01239-202ENST00000436786 TXN2Q99757 166 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 NXF2Q9GZY0 626 aaKnown RBP3.22□□□□□ -1.89
LINC01239-202ENST00000436786 FXYD6Q9H0Q3 95 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 TMEM14BQ9NUH8 114 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 FKBP11Q9NYL4 201 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 CBY1Q9Y3M2 126 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 IGHV3-66A0A0C4DH42 116 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 RAB19A4D1S5 217 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 ZNF98A6NK75 572 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 C15orf61A6NNL5 157 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 IGLL5B9A064 214 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 GPR31O00270 319 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 TSC22D2O75157 780 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 DFFBO76075 338 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 IGKV1-39P01597 117 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 IGKV1D-39P04432 117 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 TGFBR1P36897 503 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 RAB14P61106 215 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 PAFAH1B2P68402 229 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 TMEM187Q14656 261 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 TOMM20LQ6UXN7 152 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 FAM24BQ8N5W8 94 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.22□□□□□ -1.89
LINC01239-202ENST00000436786 OR6F1Q8NGZ6 308 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 OR4A16Q8NH70 328 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 ST8SIA2Q92186 375 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 PINX1Q96BK5 328 aaKnown RBP3.22□□□□□ -1.89
LINC01239-202ENST00000436786 SEC22CQ9BRL7 303 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 MS4A6AQ9H2W1 248 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 RSL24D1Q9UHA3 163 aaKnown RBP3.22□□□□□ -1.89
LINC01239-202ENST00000436786 APLNQ9ULZ1 77 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 ANAPC10Q9UM13 185 aa3.22□□□□□ -1.89
LINC01239-202ENST00000436786 FRAS1Q86XX4 4008 aa3.21□□□□□ -1.89
LINC01239-202ENST00000436786 DNASE2O00115 360 aaPredicted RBP3.21□□□□□ -1.89
LINC01239-202ENST00000436786 GATCO43716 136 aaKnown RBP3.21□□□□□ -1.89
LINC01239-202ENST00000436786 GNG7O60262 68 aa3.21□□□□□ -1.89
LINC01239-202ENST00000436786 NDUFS6O75380 124 aaKnown RBP3.21□□□□□ -1.89
LINC01239-202ENST00000436786 GIG44P09565 113 aaPredicted RBP3.21□□□□□ -1.89
LINC01239-202ENST00000436786 RBMY1A1P0DJD3 496 aaKnown RBP3.21□□□□□ -1.89
LINC01239-202ENST00000436786 RBMY1CP0DJD4 496 aa3.21□□□□□ -1.89
LINC01239-202ENST00000436786 HLA-DMAP28067 261 aa3.21□□□□□ -1.89
LINC01239-202ENST00000436786 TAS2R46P59540 309 aa3.21□□□□□ -1.89
LINC01239-202ENST00000436786 TAS2R20P59543 309 aa3.21□□□□□ -1.89
LINC01239-202ENST00000436786 DEFB131AP59861 70 aa3.21□□□□□ -1.89
LINC01239-202ENST00000436786 RPL11P62913 178 aaKnown RBP3.21□□□□□ -1.89
LINC01239-202ENST00000436786 PRCDQ00LT1 54 aa3.21□□□□□ -1.89
LINC01239-202ENST00000436786 RBMY1FQ15415 496 aaKnown RBP3.21□□□□□ -1.89
LINC01239-202ENST00000436786 NEDD8Q15843 81 aa3.21□□□□□ -1.89
LINC01239-202ENST00000436786 SPINK9Q5DT21 86 aa3.21□□□□□ -1.89
LINC01239-202ENST00000436786 UBE2NLQ5JXB2 153 aa3.21□□□□□ -1.89
LINC01239-202ENST00000436786 TMEM69Q5SWH9 247 aa3.21□□□□□ -1.89
LINC01239-202ENST00000436786 H2BFWTQ7Z2G1 175 aa3.21□□□□□ -1.89
LINC01239-202ENST00000436786 TBC1D26Q86UD7 250 aa3.21□□□□□ -1.89
LINC01239-202ENST00000436786 SAMD12Q8N8I0 201 aa3.21□□□□□ -1.89
LINC01239-202ENST00000436786 ZNF114Q8NC26 417 aa3.21□□□□□ -1.89
LINC01239-202ENST00000436786 ZNF680Q8NEM1 530 aa3.21□□□□□ -1.89
LINC01239-202ENST00000436786 SEC22AQ96IW7 307 aa3.21□□□□□ -1.89
LINC01239-202ENST00000436786 YTHDF1Q9BYJ9 559 aaKnown RBP3.21□□□□□ -1.89
LINC01239-202ENST00000436786 MRPS26Q9BYN8 205 aaKnown RBP3.21□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms