RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 RD3LP0DJH9 198 aa8.4□□□□□ -1.07
CD44-210ENST00000434472 ESDP10768 282 aa8.4□□□□□ -1.07
CD44-210ENST00000434472 CRISP2P16562 243 aa8.4□□□□□ -1.07
CD44-210ENST00000434472 TPPP2P59282 170 aa8.4□□□□□ -1.07
CD44-210ENST00000434472 RANP62826 216 aaKnown RBP8.4□□□□□ -1.07
CD44-210ENST00000434472 PRSS8Q16651 343 aa8.4□□□□□ -1.07
CD44-210ENST00000434472 FBXL19-AS1Q494R0 122 aa8.4□□□□□ -1.07
CD44-210ENST00000434472 CMTM2Q8TAZ6 248 aa8.4□□□□□ -1.07
CD44-210ENST00000434472 CLEC7AQ9BXN2 247 aa8.4□□□□□ -1.07
CD44-210ENST00000434472 CDC42EP3Q9UKI2 254 aa8.4□□□□□ -1.07
CD44-210ENST00000434472 YLPM1P49750 1951 aaKnown RBP8.39□□□□□ -1.07
CD44-210ENST00000434472 CNOT1A5YKK6 2376 aaKnown RBP8.39□□□□□ -1.07
CD44-210ENST00000434472 IGKV1D-37A0A075B6S9 117 aa8.39□□□□□ -1.07
CD44-210ENST00000434472 TRAV5A0A0B4J249 113 aa8.39□□□□□ -1.07
CD44-210ENST00000434472 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.39□□□□□ -1.07
CD44-210ENST00000434472 FCN1O00602 326 aa8.39□□□□□ -1.07
CD44-210ENST00000434472 IGLV1-47P01700 117 aa8.39□□□□□ -1.07
CD44-210ENST00000434472 PAX1P15863 534 aa8.39□□□□□ -1.07
CD44-210ENST00000434472 CX3CL1P78423 397 aa8.39□□□□□ -1.07
CD44-210ENST00000434472 Q0VG73 95 aa8.39□□□□□ -1.07
CD44-210ENST00000434472 OR5I1Q13606 314 aa8.39□□□□□ -1.07
CD44-210ENST00000434472 PRR30Q53SZ7 412 aaPredicted RBP8.39□□□□□ -1.07
CD44-210ENST00000434472 C10orf55Q5SWW7 151 aa8.39□□□□□ -1.07
CD44-210ENST00000434472 IBA57Q5T440 356 aaKnown RBP8.39□□□□□ -1.07
CD44-210ENST00000434472 PATE2Q6UY27 113 aa8.39□□□□□ -1.07
CD44-210ENST00000434472 FAM231DQ6ZW35 169 aa8.39□□□□□ -1.07
CD44-210ENST00000434472 OR8I2Q8N0Y5 310 aa8.39□□□□□ -1.07
CD44-210ENST00000434472 C11orf42Q8N5U0 333 aa8.39□□□□□ -1.07
CD44-210ENST00000434472 TMEM190Q8WZ59 177 aa8.39□□□□□ -1.07
CD44-210ENST00000434472 TNFRSF19Q9NS68 423 aa8.39□□□□□ -1.07
CD44-210ENST00000434472 INSIG2Q9Y5U4 225 aa8.39□□□□□ -1.07
CD44-210ENST00000434472 IGLC7A0M8Q6 106 aa8.38□□□□□ -1.07
CD44-210ENST00000434472 ZNF705GA8MUZ8 300 aaPredicted RBP8.38□□□□□ -1.07
CD44-210ENST00000434472 SNURFLB1AK76 121 aa8.38□□□□□ -1.07
CD44-210ENST00000434472 BUB1B-PAK6H3BSN5 160 aa8.38□□□□□ -1.07
CD44-210ENST00000434472 PEX7O00628 323 aa8.38□□□□□ -1.07
CD44-210ENST00000434472 IGLV2-8P01709 118 aa8.38□□□□□ -1.07
CD44-210ENST00000434472 MGST1P10620 155 aaKnown RBP8.38□□□□□ -1.07
CD44-210ENST00000434472 CBLN1P23435 193 aa8.38□□□□□ -1.07
CD44-210ENST00000434472 IER3P46695 156 aa8.38□□□□□ -1.07
CD44-210ENST00000434472 TNXAQ16473 311 aa8.38□□□□□ -1.07
CD44-210ENST00000434472 MRGPRG-AS1Q2M3A8 158 aa8.38□□□□□ -1.07
CD44-210ENST00000434472 ZNF329Q86UD4 541 aa8.38□□□□□ -1.07
CD44-210ENST00000434472 C8orf46Q8TAG6 207 aa8.38□□□□□ -1.07
CD44-210ENST00000434472 SMIM12Q96EX1 92 aa8.38□□□□□ -1.07
CD44-210ENST00000434472 MISP3Q96FF7 219 aa8.38□□□□□ -1.07
CD44-210ENST00000434472 SRSF8Q9BRL6 282 aaKnown RBP8.38□□□□□ -1.07
CD44-210ENST00000434472 PRO1933Q9H354 126 aa8.38□□□□□ -1.07
CD44-210ENST00000434472 ZMAT5Q9UDW3 170 aaKnown RBP8.38□□□□□ -1.07
CD44-210ENST00000434472 PLCE1Q9P212 2302 aa8.38□□□□□ -1.07
CD44-210ENST00000434472 PPIAL4CA0A0B4J2A2 164 aa8.37□□□□□ -1.07
CD44-210ENST00000434472 IGHV1-3A0A0C4DH29 117 aa8.37□□□□□ -1.07
CD44-210ENST00000434472 SMIM27A0A1W2PRY6 76 aa8.37□□□□□ -1.07
CD44-210ENST00000434472 IZUMO1RA6ND01 250 aa8.37□□□□□ -1.07
CD44-210ENST00000434472 AMY1AP04745 511 aa8.37□□□□□ -1.07
CD44-210ENST00000434472 PPIAL4GP0DN37 164 aa8.37□□□□□ -1.07
CD44-210ENST00000434472 UCNP55089 124 aa8.37□□□□□ -1.07
CD44-210ENST00000434472 PLP1P60201 277 aa8.37□□□□□ -1.07
CD44-210ENST00000434472 SSBP2P81877 361 aaPredicted RBP8.37□□□□□ -1.07
CD44-210ENST00000434472 RASL11AQ6T310 242 aa8.37□□□□□ -1.07
CD44-210ENST00000434472 ZNF841Q6ZN19 808 aa8.37□□□□□ -1.07
CD44-210ENST00000434472 LINC00305Q7Z4B0 112 aa8.37□□□□□ -1.07
CD44-210ENST00000434472 TMEM256Q8N2U0 113 aa8.37□□□□□ -1.07
CD44-210ENST00000434472 MUC15Q8N387 334 aa8.37□□□□□ -1.07
CD44-210ENST00000434472 TMEM116Q8NCL8 245 aa8.37□□□□□ -1.07
CD44-210ENST00000434472 OR8B3Q8NGG8 313 aa8.37□□□□□ -1.07
CD44-210ENST00000434472 FXYD5Q96DB9 178 aa8.37□□□□□ -1.07
CD44-210ENST00000434472 MS4A10Q96PG2 267 aa8.37□□□□□ -1.07
CD44-210ENST00000434472 OR8B2Q96RD0 313 aa8.37□□□□□ -1.07
CD44-210ENST00000434472 SIGLEC9Q9Y336 463 aa8.37□□□□□ -1.07
CD44-210ENST00000434472 HYPMO75409 117 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 HLA-DQA1P01909 254 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 PYYP10082 97 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 CA7P43166 264 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 RAB4BP61018 213 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 ZNF672Q499Z4 452 aaPredicted RBP8.36□□□□□ -1.07
CD44-210ENST00000434472 OR10J3Q5JRS4 329 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 MORN5Q5VZ52 161 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 BAGE3Q86Y29 109 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 BAGE2Q86Y30 109 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 RPEQ96AT9 228 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 GRAMD2BQ96HH9 432 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 C14orf144Q96I85 54 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 RITA1Q96K30 269 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 SCNM1Q9BWG6 230 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 RNASE7Q9H1E1 156 aaKnown RBP8.36□□□□□ -1.07
CD44-210ENST00000434472 TPSG1Q9NRR2 321 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 SERTAD4Q9NUC0 356 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 NAGKQ9UJ70 344 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 F11RQ9Y624 299 aaKnown RBP8.36□□□□□ -1.07
CD44-210ENST00000434472 IGHV3-72A0A0B4J1Y9 119 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 SCGB1D1O95968 90 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 REG1AP05451 166 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 COL8A2P25067 703 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 MYCNOSP40205 109 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 UBE2G1P62253 170 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 LBHQ53QV2 105 aaPredicted RBP8.36□□□□□ -1.07
CD44-210ENST00000434472 TMEM136Q6ZRR5 245 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 PPP1R27Q86WC6 154 aa8.36□□□□□ -1.07
CD44-210ENST00000434472 ZNF664Q8N3J9 261 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms