RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 RELQ04864 619 aaPredicted RBP11.87□□□□□ -0.51
TREX1-201ENST00000433541 ETFRF1Q6IPR1 90 aa11.87□□□□□ -0.51
TREX1-201ENST00000433541 TXN2Q99757 166 aa11.87□□□□□ -0.51
TREX1-201ENST00000433541 C20orf24Q9BUV8 137 aa11.87□□□□□ -0.51
TREX1-201ENST00000433541 PALMDQ9NP74 551 aa11.87□□□□□ -0.51
TREX1-201ENST00000433541 IL5P05113 134 aa11.86□□□□□ -0.51
TREX1-201ENST00000433541 BSXQ3C1V8 233 aa11.86□□□□□ -0.51
TREX1-201ENST00000433541 GSG1LQ6UXU4 331 aa11.86□□□□□ -0.51
TREX1-201ENST00000433541 HAPLN4Q86UW8 402 aa11.86□□□□□ -0.51
TREX1-201ENST00000433541 GPHB5Q86YW7 130 aa11.86□□□□□ -0.51
TREX1-201ENST00000433541 ZBTB8BQ8NAP8 495 aaPredicted RBP11.86□□□□□ -0.51
TREX1-201ENST00000433541 RNASEH2CQ8TDP1 164 aaKnown RBP11.86□□□□□ -0.51
TREX1-201ENST00000433541 OR10C1Q96KK4 312 aa11.86□□□□□ -0.51
TREX1-201ENST00000433541 ATP6V0BQ99437 205 aa11.86□□□□□ -0.51
TREX1-201ENST00000433541 H3BP45 60 aa11.85□□□□□ -0.51
TREX1-201ENST00000433541 POLR2GP62487 172 aaKnown RBP eCLIP11.85□□□□□ -0.51
TREX1-201ENST00000433541 DCTN2Q13561 401 aaKnown RBP11.85□□□□□ -0.51
TREX1-201ENST00000433541 MLANAQ16655 118 aa11.85□□□□□ -0.51
TREX1-201ENST00000433541 SPANXN5Q5MJ07 72 aa11.85□□□□□ -0.51
TREX1-201ENST00000433541 KPRPQ5T749 579 aaPredicted RBP11.85□□□□□ -0.51
TREX1-201ENST00000433541 ACY3Q96HD9 319 aa11.85□□□□□ -0.51
TREX1-201ENST00000433541 CHRDL1Q9BU40 450 aa11.85□□□□□ -0.51
TREX1-201ENST00000433541 SORL1Q92673 2214 aa11.84□□□□□ -0.51
TREX1-201ENST00000433541 IGHV3OR16-8A0A075B7F1 116 aa11.84□□□□□ -0.51
TREX1-201ENST00000433541 L7N2F9 121 aa11.84□□□□□ -0.51
TREX1-201ENST00000433541 LGALS9O00182 355 aa11.84□□□□□ -0.51
TREX1-201ENST00000433541 SSNA1O43805 119 aa11.84□□□□□ -0.51
TREX1-201ENST00000433541 PTTG1O95997 202 aa11.84□□□□□ -0.51
TREX1-201ENST00000433541 SLC25A4P12235 298 aa11.84□□□□□ -0.51
TREX1-201ENST00000433541 RND2P52198 227 aa11.84□□□□□ -0.51
TREX1-201ENST00000433541 S100A10P60903 97 aa11.84□□□□□ -0.51
TREX1-201ENST00000433541 VAMP2P63027 116 aa11.84□□□□□ -0.51
TREX1-201ENST00000433541 REC114Q7Z4M0 266 aa11.84□□□□□ -0.51
TREX1-201ENST00000433541 OR4D5Q8NGN0 318 aa11.84□□□□□ -0.51
TREX1-201ENST00000433541 MARVELD1Q9BSK0 173 aa11.84□□□□□ -0.51
TREX1-201ENST00000433541 FNDC4Q9H6D8 234 aaPredicted RBP11.84□□□□□ -0.51
TREX1-201ENST00000433541 UFC1Q9Y3C8 167 aa11.84□□□□□ -0.51
TREX1-201ENST00000433541 STRAPQ9Y3F4 350 aaKnown RBP11.84□□□□□ -0.51
TREX1-201ENST00000433541 LSM5Q9Y4Y9 91 aaKnown RBP11.84□□□□□ -0.51
TREX1-201ENST00000433541 C2orf70A6NJV1 201 aa11.83□□□□□ -0.52
TREX1-201ENST00000433541 F8W735 103 aaPredicted RBP11.83□□□□□ -0.52
TREX1-201ENST00000433541 NDUFA4O00483 81 aa11.83□□□□□ -0.52
TREX1-201ENST00000433541 GOSR2O14653 212 aa11.83□□□□□ -0.52
TREX1-201ENST00000433541 CTSGP08311 255 aa11.83□□□□□ -0.52
TREX1-201ENST00000433541 SPNP16150 400 aa11.83□□□□□ -0.52
TREX1-201ENST00000433541 ATP5IP56385 69 aaPredicted RBP11.83□□□□□ -0.52
TREX1-201ENST00000433541 KRTAP10-11P60412 298 aa11.83□□□□□ -0.52
TREX1-201ENST00000433541 EGFEM1PQ0D2K5 195 aa11.83□□□□□ -0.52
TREX1-201ENST00000433541 SLC16A13Q7RTY0 426 aa11.83□□□□□ -0.52
TREX1-201ENST00000433541 SLC35E1Q96K37 410 aa11.83□□□□□ -0.52
TREX1-201ENST00000433541 AURKAIP1Q9NWT8 199 aaPredicted RBP11.83□□□□□ -0.52
TREX1-201ENST00000433541 PSENENQ9NZ42 101 aa11.83□□□□□ -0.52
TREX1-201ENST00000433541 ZNF256Q9Y2P7 627 aaPredicted RBP11.83□□□□□ -0.52
TREX1-201ENST00000433541 TRAV30A0A087WSZ9 112 aa11.82□□□□□ -0.52
TREX1-201ENST00000433541 SNRPGP15A8MWD9 76 aa11.82□□□□□ -0.52
TREX1-201ENST00000433541 ZNF207O43670 478 aaKnown RBP11.82□□□□□ -0.52
TREX1-201ENST00000433541 CLN5O75503 358 aa11.82□□□□□ -0.52
TREX1-201ENST00000433541 CSN3P07498 182 aa11.82□□□□□ -0.52
TREX1-201ENST00000433541 FOLR2P14207 255 aa11.82□□□□□ -0.52
TREX1-201ENST00000433541 ADMP35318 185 aa11.82□□□□□ -0.52
TREX1-201ENST00000433541 ID3Q02535 119 aa11.82□□□□□ -0.52
TREX1-201ENST00000433541 TM4SF20Q53R12 229 aa11.82□□□□□ -0.52
TREX1-201ENST00000433541 PVRIGQ6DKI7 326 aa11.82□□□□□ -0.52
TREX1-201ENST00000433541 UNQ9165/PRO28630Q6UXU0 137 aa11.82□□□□□ -0.52
TREX1-201ENST00000433541 OR4X1Q8NH49 305 aa11.82□□□□□ -0.52
TREX1-201ENST00000433541 MRAPQ8TCY5 172 aa11.82□□□□□ -0.52
TREX1-201ENST00000433541 TMEM170AQ8WVE7 144 aa11.82□□□□□ -0.52
TREX1-201ENST00000433541 CACNG8Q8WXS5 425 aa11.82□□□□□ -0.52
TREX1-201ENST00000433541 C2orf50Q96LR7 162 aa11.82□□□□□ -0.52
TREX1-201ENST00000433541 PRR25Q96S07 402 aa11.82□□□□□ -0.52
TREX1-201ENST00000433541 SELENOKQ9Y6D0 94 aa11.82□□□□□ -0.52
TREX1-201ENST00000433541 C15orf62A8K5M9 175 aa11.81□□□□□ -0.52
TREX1-201ENST00000433541 A8MWP6 167 aa11.81□□□□□ -0.52
TREX1-201ENST00000433541 WIPF1O43516 503 aa11.81□□□□□ -0.52
TREX1-201ENST00000433541 TMEM50AO95807 157 aa11.81□□□□□ -0.52
TREX1-201ENST00000433541 PVALBP20472 110 aaPredicted RBP11.81□□□□□ -0.52
TREX1-201ENST00000433541 OR10J1P30954 320 aa11.81□□□□□ -0.52
TREX1-201ENST00000433541 FCGR2BP31994 310 aaPredicted RBP11.81□□□□□ -0.52
TREX1-201ENST00000433541 BCAP31P51572 246 aa11.81□□□□□ -0.52
TREX1-201ENST00000433541 CD69Q07108 199 aa11.81□□□□□ -0.52
TREX1-201ENST00000433541 DEFB121Q5J5C9 76 aa11.81□□□□□ -0.52
TREX1-201ENST00000433541 OR8G2PQ6IF36 304 aa11.81□□□□□ -0.52
TREX1-201ENST00000433541 LCN12Q6JVE5 192 aa11.81□□□□□ -0.52
TREX1-201ENST00000433541 TMEM190Q8WZ59 177 aa11.81□□□□□ -0.52
TREX1-201ENST00000433541 NPIPB3Q92617 1050 aa11.81□□□□□ -0.52
TREX1-201ENST00000433541 RAB40CQ96S21 281 aa11.81□□□□□ -0.52
TREX1-201ENST00000433541 ZNF436Q9C0F3 470 aaPredicted RBP11.81□□□□□ -0.52
TREX1-201ENST00000433541 DAZ1Q9NQZ3 744 aaKnown RBP11.81□□□□□ -0.52
TREX1-201ENST00000433541 MRPL36Q9P0J6 103 aaKnown RBP11.81□□□□□ -0.52
TREX1-201ENST00000433541 RCL1Q9Y2P8 373 aaKnown RBP11.81□□□□□ -0.52
TREX1-201ENST00000433541 MEGF8Q7Z7M0 2845 aa11.81□□□□□ -0.52
TREX1-201ENST00000433541 SMCO3A2RU48 225 aa11.8□□□□□ -0.52
TREX1-201ENST00000433541 IGLV1-51P01701 117 aa11.8□□□□□ -0.52
TREX1-201ENST00000433541 MBPP02686 304 aaPredicted RBP11.8□□□□□ -0.52
TREX1-201ENST00000433541 EDN2P20800 178 aa11.8□□□□□ -0.52
TREX1-201ENST00000433541 CBLN1P23435 193 aa11.8□□□□□ -0.52
TREX1-201ENST00000433541 RGS21Q2M5E4 152 aa11.8□□□□□ -0.52
TREX1-201ENST00000433541 TIGITQ495A1 244 aa11.8□□□□□ -0.52
TREX1-201ENST00000433541 PRSS54Q6PEW0 395 aa11.8□□□□□ -0.52
TREX1-201ENST00000433541 IL34Q6ZMJ4 242 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms