RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 PARLQ9H300 379 aa3.12□□□□□ -1.91
SHPRH-205ENST00000433355 IZUMO1RA6ND01 250 aa3.12□□□□□ -1.91
SHPRH-205ENST00000433355 EFNA2O43921 213 aa3.12□□□□□ -1.91
SHPRH-205ENST00000433355 WNT5AP41221 380 aa3.12□□□□□ -1.91
SHPRH-205ENST00000433355 FCGR3BO75015 233 aa3.12□□□□□ -1.91
SHPRH-205ENST00000433355 SMIM17P0DL12 118 aa3.12□□□□□ -1.91
SHPRH-205ENST00000433355 HNRNPA3P51991 378 aaKnown RBP3.12□□□□□ -1.91
SHPRH-205ENST00000433355 SNRPD3P62318 126 aaKnown RBP3.12□□□□□ -1.91
SHPRH-205ENST00000433355 CX3CL1P78423 397 aa3.12□□□□□ -1.91
SHPRH-205ENST00000433355 JOSD1Q15040 202 aaPredicted RBP3.12□□□□□ -1.91
SHPRH-205ENST00000433355 TWIST1Q15672 202 aa3.12□□□□□ -1.91
SHPRH-205ENST00000433355 OR4X1Q8NH49 305 aa3.12□□□□□ -1.91
SHPRH-205ENST00000433355 GAGE1Q13065 139 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 AKIRIN2Q53H80 203 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 TMEM97Q5BJF2 176 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 SYT8Q8NBV8 401 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 STARD4Q96DR4 205 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 A6NIN4 97 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 PRKNO60260 465 aaPredicted RBP3.11□□□□□ -1.91
SHPRH-205ENST00000433355 MED14OSP0DP75 135 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 PRTN3P24158 256 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 SSTR5P35346 364 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 NUTF2P61970 127 aaKnown RBP3.11□□□□□ -1.91
SHPRH-205ENST00000433355 ICAM4Q14773 271 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 PRSS8Q16651 343 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 MOGAT3Q86VF5 341 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 GPR146Q96CH1 333 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 ZNF319Q9P2F9 582 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 GDF9O60383 454 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 COL8A1P27658 744 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 HGFACQ04756 655 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 MMDQ15546 238 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 FAM106AQ4KMX7 169 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 AJUBAQ96IF1 538 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 SPACA5Q96QH8 159 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 RPP21Q9H633 154 aaKnown RBP3.11□□□□□ -1.91
SHPRH-205ENST00000433355 ZNF552Q9H707 407 aaPredicted RBP3.11□□□□□ -1.91
SHPRH-205ENST00000433355 PRR27Q6MZM9 219 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 OR11H6Q8NGC7 330 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 ODF3Q96PU9 254 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 NDUFA4L2Q9NRX3 87 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 IL36BQ9NZH7 164 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 LINC00587B1AMM8 73 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 PLNP26678 52 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 GBGT1Q8N5D6 347 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 ZNF738Q8NE65 137 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 ZNF705FA8MVS1 300 aaPredicted RBP3.11□□□□□ -1.91
SHPRH-205ENST00000433355 RHODO00212 210 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 OVOL1O14753 267 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 TOMM40O96008 361 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 ADRA2AP08913 450 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 ZNF705DP0CH99 300 aaPredicted RBP3.11□□□□□ -1.91
SHPRH-205ENST00000433355 RPS27P42677 84 aaKnown RBP3.11□□□□□ -1.91
SHPRH-205ENST00000433355 VASH2Q86V25 355 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 OR8I2Q8N0Y5 310 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 C12orf49Q9H741 205 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 TMEM78Q5T7P6 136 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 RELL2Q8NC24 303 aaPredicted RBP3.11□□□□□ -1.91
SHPRH-205ENST00000433355 MUC7Q8TAX7 377 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 NABP2Q9BQ15 211 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 MAP1LC3CQ9BXW4 147 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 IGKV1-27A0A075B6S5 117 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 HOXA5P20719 270 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 EDDM3AQ14507 147 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 NEGR1Q7Z3B1 354 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 GSX1Q9H4S2 264 aaPredicted RBP3.11□□□□□ -1.91
SHPRH-205ENST00000433355 C21orf62Q9NYP8 219 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 ORMDL3Q8N138 153 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 OR5A1Q8NGJ0 315 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 UBALD1Q8TB05 177 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 KLF12Q9Y4X4 402 aa3.11□□□□□ -1.91
SHPRH-205ENST00000433355 TIAF1O95411 115 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 VDAC2P45880 294 aaPredicted RBP3.1□□□□□ -1.91
SHPRH-205ENST00000433355 COL10A1Q03692 680 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 FAM78BQ5VT40 261 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 C9orf135Q5VTT2 229 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 SLC25A34Q6PIV7 304 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 DTX2Q86UW9 622 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 TMEM86BQ8N661 226 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 RNF125Q96EQ8 232 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 H0YIZ8 118 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 LINC00614P0C842 121 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 RIPPLY3P57055 190 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 SRSF12Q8WXF0 261 aaKnown RBP3.1□□□□□ -1.91
SHPRH-205ENST00000433355 TP53RKQ96S44 253 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 SHANK2-AS3Q9BTD1 123 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 C11orf1Q9H5F2 150 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 IGHV1-3A0A0C4DH29 117 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 SIVA1O15304 175 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 APCSP02743 223 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 GRPP07492 148 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 RPL35P42766 123 aaKnown RBP3.1□□□□□ -1.91
SHPRH-205ENST00000433355 SPRED2Q7Z698 418 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 CXorf67Q86X51 503 aaPredicted RBP3.1□□□□□ -1.91
SHPRH-205ENST00000433355 WFDC8Q8IUA0 241 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 MUC15Q8N387 334 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 EEF1AKMT3Q96AZ1 226 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 DCTN5Q9BTE1 182 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 TRAV2A0A0B4J234 112 aa3.1□□□□□ -1.91
SHPRH-205ENST00000433355 A0A1B0GUS0 222 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms