RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 RPL35P42766 123 aaKnown RBP10.31□□□□□ -0.76
DDX56-204ENST00000431640 MLANAQ16655 118 aa10.31□□□□□ -0.76
DDX56-204ENST00000431640 PPP1R27Q86WC6 154 aa10.31□□□□□ -0.76
DDX56-204ENST00000431640 THAP8Q8NA92 274 aa10.31□□□□□ -0.76
DDX56-204ENST00000431640 OR2T6Q8NHC8 308 aa10.31□□□□□ -0.76
DDX56-204ENST00000431640 ACY3Q96HD9 319 aa10.31□□□□□ -0.76
DDX56-204ENST00000431640 RITA1Q96K30 269 aa10.31□□□□□ -0.76
DDX56-204ENST00000431640 PFDN5Q99471 154 aa10.31□□□□□ -0.76
DDX56-204ENST00000431640 SRSF8Q9BRL6 282 aaKnown RBP10.31□□□□□ -0.76
DDX56-204ENST00000431640 PYGO2Q9BRQ0 406 aa10.31□□□□□ -0.76
DDX56-204ENST00000431640 TCEAL7Q9BRU2 100 aa10.31□□□□□ -0.76
DDX56-204ENST00000431640 SSBP3Q9BWW4 388 aaPredicted RBP10.31□□□□□ -0.76
DDX56-204ENST00000431640 DNAJC4Q9NNZ3 241 aa10.31□□□□□ -0.76
DDX56-204ENST00000431640 SIGLEC9Q9Y336 463 aa10.31□□□□□ -0.76
DDX56-204ENST00000431640 IGHV3-72A0A0B4J1Y9 119 aa10.3□□□□□ -0.76
DDX56-204ENST00000431640 A0A1W2PPI3 338 aa10.3□□□□□ -0.76
DDX56-204ENST00000431640 PFN1P07737 140 aaKnown RBP10.3□□□□□ -0.76
DDX56-204ENST00000431640 C8orf88P0DMB2 117 aa10.3□□□□□ -0.76
DDX56-204ENST00000431640 COX7A1P24310 79 aa10.3□□□□□ -0.76
DDX56-204ENST00000431640 GALR1P47211 349 aa10.3□□□□□ -0.76
DDX56-204ENST00000431640 PAX2Q02962 417 aa10.3□□□□□ -0.76
DDX56-204ENST00000431640 KIAA0141Q14154 515 aaPredicted RBP10.3□□□□□ -0.76
DDX56-204ENST00000431640 TNXAQ16473 311 aa10.3□□□□□ -0.76
DDX56-204ENST00000431640 MRGPRG-AS1Q2M3A8 158 aa10.3□□□□□ -0.76
DDX56-204ENST00000431640 SPATA31B1PQ5VZV4 182 aa10.3□□□□□ -0.76
DDX56-204ENST00000431640 MIR17HGQ75NE6 70 aa10.3□□□□□ -0.76
DDX56-204ENST00000431640 C22orf15Q8WYQ4 148 aa10.3□□□□□ -0.76
DDX56-204ENST00000431640 IMMP2LQ96T52 175 aa10.3□□□□□ -0.76
DDX56-204ENST00000431640 DPM3Q9P2X0 92 aa10.3□□□□□ -0.76
DDX56-204ENST00000431640 LY96Q9Y6Y9 160 aa10.3□□□□□ -0.76
DDX56-204ENST00000431640 FASNP49327 2511 aaKnown RBP10.3□□□□□ -0.76
DDX56-204ENST00000431640 VPS13CQ709C8 3753 aa10.29□□□□□ -0.76
DDX56-204ENST00000431640 TCRBV4S1A1TA0A5B7 111 aa10.29□□□□□ -0.76
DDX56-204ENST00000431640 FOXH1O75593 365 aa10.29□□□□□ -0.76
DDX56-204ENST00000431640 PRTN3P24158 256 aa10.29□□□□□ -0.76
DDX56-204ENST00000431640 FABP9Q0Z7S8 132 aa10.29□□□□□ -0.76
DDX56-204ENST00000431640 TPTE2P1Q5T6R2 138 aa10.29□□□□□ -0.76
DDX56-204ENST00000431640 KCNIP4Q6PIL6 250 aa10.29□□□□□ -0.76
DDX56-204ENST00000431640 LINC01551Q86U37 167 aa10.29□□□□□ -0.76
DDX56-204ENST00000431640 OR51G1Q8NGK1 321 aa10.29□□□□□ -0.76
DDX56-204ENST00000431640 C11orf52Q96A22 123 aa10.29□□□□□ -0.76
DDX56-204ENST00000431640 SSX3Q99909 188 aa10.29□□□□□ -0.76
DDX56-204ENST00000431640 SLC25A33Q9BSK2 321 aa10.29□□□□□ -0.76
DDX56-204ENST00000431640 YTHDF2Q9Y5A9 579 aaKnown RBP10.29□□□□□ -0.76
DDX56-204ENST00000431640 CSMD1Q96PZ7 3565 aa10.28□□□□□ -0.76
DDX56-204ENST00000431640 IGLC7A0M8Q6 106 aa10.28□□□□□ -0.76
DDX56-204ENST00000431640 C22orf46C9J442 243 aa10.28□□□□□ -0.76
DDX56-204ENST00000431640 OVOL3O00110 214 aa10.28□□□□□ -0.76
DDX56-204ENST00000431640 CRYGCP07315 174 aa10.28□□□□□ -0.76
DDX56-204ENST00000431640 GPR6P46095 362 aaPredicted RBP10.28□□□□□ -0.76
DDX56-204ENST00000431640 BPIFB3P59826 476 aa10.28□□□□□ -0.76
DDX56-204ENST00000431640 C10orf55Q5SWW7 151 aa10.28□□□□□ -0.76
DDX56-204ENST00000431640 KIR3DL3Q8N743 410 aa10.28□□□□□ -0.76
DDX56-204ENST00000431640 OR1P1Q8NH06 330 aa10.28□□□□□ -0.76
DDX56-204ENST00000431640 NPIPB3Q92617 1050 aa10.28□□□□□ -0.76
DDX56-204ENST00000431640 SRD5A3Q9H8P0 318 aa10.28□□□□□ -0.76
DDX56-204ENST00000431640 APCP25054 2843 aa10.27□□□□□ -0.76
DDX56-204ENST00000431640 ELOA3CA0A087WX78 387 aaPredicted RBP10.27□□□□□ -0.76
DDX56-204ENST00000431640 A0A1W2PRE2 83 aa10.27□□□□□ -0.76
DDX56-204ENST00000431640 C9JCJ5 164 aa10.27□□□□□ -0.76
DDX56-204ENST00000431640 S100A9P06702 114 aaKnown RBP10.27□□□□□ -0.76
DDX56-204ENST00000431640 ARF6P62330 175 aa10.27□□□□□ -0.76
DDX56-204ENST00000431640 FNDC4Q9H6D8 234 aaPredicted RBP10.27□□□□□ -0.76
DDX56-204ENST00000431640 TPSG1Q9NRR2 321 aa10.27□□□□□ -0.76
DDX56-204ENST00000431640 AKAP6Q13023 2319 aa10.27□□□□□ -0.76
DDX56-204ENST00000431640 OOSP1A8MZH6 123 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 COX7A2P2O60397 106 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 OR7C2O60412 319 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 TRGC2P03986 189 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 HOXA5P20719 270 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 GATA2P23769 480 aaPredicted RBP10.26□□□□□ -0.77
DDX56-204ENST00000431640 C10orf113Q5VZT2 155 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 OR1L6Q8NGR2 347 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 OR2T10Q8NGZ9 312 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 TMEM37Q8WXS4 190 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 TRGV9Q99603 122 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 TNCP24821 2201 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 MDFIC2A0A1B0GVS7 189 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 SCO2A0A1W2PP80 73 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 PSMB11A5LHX3 300 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 ZNF98A6NK75 572 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 PPP5D1E7EU14 171 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 GGCTO75223 188 aaKnown RBP10.26□□□□□ -0.77
DDX56-204ENST00000431640 CNTFRP26992 372 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 MEOX2P50222 304 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 EFNA4P52798 201 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 LCN2P80188 198 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 FOXL1Q12952 345 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 PLGLAQ15195 96 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 CCDC144NLQ6NUI1 221 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 TMEM116Q8NCL8 245 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 STXBP6Q8NFX7 210 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 OR4X1Q8NH49 305 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 MISP3Q96FF7 219 aa10.26□□□□□ -0.77
DDX56-204ENST00000431640 F11RQ9Y624 299 aaKnown RBP10.26□□□□□ -0.77
DDX56-204ENST00000431640 HELTA6NFD8 242 aa10.25□□□□□ -0.77
DDX56-204ENST00000431640 ODF3BA8MYP8 253 aa10.25□□□□□ -0.77
DDX56-204ENST00000431640 TIMM23O14925 209 aa10.25□□□□□ -0.77
DDX56-204ENST00000431640 MOSP00540 346 aa10.25□□□□□ -0.77
DDX56-204ENST00000431640 DLX1P56177 255 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms