RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 ACY3Q96HD9 319 aa11.17□□□□□ -0.62
HOXC4-202ENST00000430889 OR5B12Q96R08 314 aa11.17□□□□□ -0.62
HOXC4-202ENST00000430889 TCEAL7Q9BRU2 100 aa11.17□□□□□ -0.62
HOXC4-202ENST00000430889 SLC25A2Q9BXI2 301 aa11.17□□□□□ -0.62
HOXC4-202ENST00000430889 ARHGAP32A7KAX9 2087 aa11.16□□□□□ -0.62
HOXC4-202ENST00000430889 CACNA1AO00555 2505 aa11.16□□□□□ -0.62
HOXC4-202ENST00000430889 ODF3BA8MYP8 253 aa11.16□□□□□ -0.62
HOXC4-202ENST00000430889 M0R1W7 72 aa11.16□□□□□ -0.62
HOXC4-202ENST00000430889 PPP1R2P9O14990 202 aa11.16□□□□□ -0.62
HOXC4-202ENST00000430889 REG1AP05451 166 aa11.16□□□□□ -0.62
HOXC4-202ENST00000430889 SFTPCP11686 197 aa11.16□□□□□ -0.62
HOXC4-202ENST00000430889 S100PP25815 95 aa11.16□□□□□ -0.62
HOXC4-202ENST00000430889 NDUFA6P56556 154 aa11.16□□□□□ -0.62
HOXC4-202ENST00000430889 TAS2R45P59539 299 aa11.16□□□□□ -0.62
HOXC4-202ENST00000430889 LY6DQ14210 128 aa11.16□□□□□ -0.62
HOXC4-202ENST00000430889 TPTE2P1Q5T6R2 138 aa11.16□□□□□ -0.62
HOXC4-202ENST00000430889 OR4X1Q8NH49 305 aa11.16□□□□□ -0.62
HOXC4-202ENST00000430889 TIMD4Q96H15 378 aa11.16□□□□□ -0.62
HOXC4-202ENST00000430889 HIVEP3Q5T1R4 2406 aa11.16□□□□□ -0.62
HOXC4-202ENST00000430889 A0A1W2PRE2 83 aa11.15□□□□□ -0.62
HOXC4-202ENST00000430889 GGTLC3B5MD39 225 aa11.15□□□□□ -0.62
HOXC4-202ENST00000430889 K7EN84 100 aa11.15□□□□□ -0.62
HOXC4-202ENST00000430889 SELENOTP62341 195 aa11.15□□□□□ -0.62
HOXC4-202ENST00000430889 TEX38Q6PEX7 206 aa11.15□□□□□ -0.62
HOXC4-202ENST00000430889 PPP1R27Q86WC6 154 aa11.15□□□□□ -0.62
HOXC4-202ENST00000430889 MRPL41Q8IXM3 137 aaKnown RBP11.15□□□□□ -0.62
HOXC4-202ENST00000430889 OR2T10Q8NGZ9 312 aa11.15□□□□□ -0.62
HOXC4-202ENST00000430889 OR1P1Q8NH06 330 aa11.15□□□□□ -0.62
HOXC4-202ENST00000430889 OCC1Q8TAD7 63 aa11.15□□□□□ -0.62
HOXC4-202ENST00000430889 CFHR4Q92496 578 aa11.15□□□□□ -0.62
HOXC4-202ENST00000430889 RPEQ96AT9 228 aa11.15□□□□□ -0.62
HOXC4-202ENST00000430889 SFRP2Q96HF1 295 aa11.15□□□□□ -0.62
HOXC4-202ENST00000430889 UHRF2Q96PU4 802 aa11.15□□□□□ -0.62
HOXC4-202ENST00000430889 DNAJC4Q9NNZ3 241 aa11.15□□□□□ -0.62
HOXC4-202ENST00000430889 AURKAIP1Q9NWT8 199 aaPredicted RBP11.15□□□□□ -0.62
HOXC4-202ENST00000430889 ONECUT1Q9UBC0 465 aa11.15□□□□□ -0.62
HOXC4-202ENST00000430889 DMRT1Q9Y5R6 373 aa11.15□□□□□ -0.62
HOXC4-202ENST00000430889 LCN2P80188 198 aa11.14□□□□□ -0.63
HOXC4-202ENST00000430889 ZNF90Q03938 601 aa11.14□□□□□ -0.63
HOXC4-202ENST00000430889 FOXL1Q12952 345 aa11.14□□□□□ -0.63
HOXC4-202ENST00000430889 SSX2Q16385 188 aa11.14□□□□□ -0.63
HOXC4-202ENST00000430889 TNXAQ16473 311 aa11.14□□□□□ -0.63
HOXC4-202ENST00000430889 TMEM116Q8NCL8 245 aa11.14□□□□□ -0.63
HOXC4-202ENST00000430889 ELOA3CA0A087WX78 387 aaPredicted RBP11.14□□□□□ -0.63
HOXC4-202ENST00000430889 FAM3BP58499 235 aaPredicted RBP11.14□□□□□ -0.63
HOXC4-202ENST00000430889 ETFRF1Q6IPR1 90 aa11.14□□□□□ -0.63
HOXC4-202ENST00000430889 C19orf35Q6ZS72 473 aa11.14□□□□□ -0.63
HOXC4-202ENST00000430889 HIST3H2BBQ8N257 126 aa11.14□□□□□ -0.63
HOXC4-202ENST00000430889 OR5T1Q8NG75 326 aa11.14□□□□□ -0.63
HOXC4-202ENST00000430889 OR1L4Q8NGR5 311 aa11.14□□□□□ -0.63
HOXC4-202ENST00000430889 EAF1Q96JC9 268 aaPredicted RBP11.14□□□□□ -0.63
HOXC4-202ENST00000430889 PFDN5Q99471 154 aa11.14□□□□□ -0.63
HOXC4-202ENST00000430889 TRGV9Q99603 122 aa11.14□□□□□ -0.63
HOXC4-202ENST00000430889 SSBP3Q9BWW4 388 aaPredicted RBP11.14□□□□□ -0.63
HOXC4-202ENST00000430889 F11RQ9Y624 299 aaKnown RBP11.14□□□□□ -0.63
HOXC4-202ENST00000430889 NBASA2RRP1 2371 aa11.14□□□□□ -0.63
HOXC4-202ENST00000430889 TPRP12270 2363 aaKnown RBP11.13□□□□□ -0.63
HOXC4-202ENST00000430889 COL6A6A6NMZ7 2263 aa11.13□□□□□ -0.63
HOXC4-202ENST00000430889 LOC105371242A0A075B767 164 aa11.13□□□□□ -0.63
HOXC4-202ENST00000430889 TRAV5A0A0B4J249 113 aa11.13□□□□□ -0.63
HOXC4-202ENST00000430889 A0A1W2PPQ1 181 aa11.13□□□□□ -0.63
HOXC4-202ENST00000430889 A6NNC1 897 aa11.13□□□□□ -0.63
HOXC4-202ENST00000430889 TIMM23O14925 209 aa11.13□□□□□ -0.63
HOXC4-202ENST00000430889 OR7C2O60412 319 aa11.13□□□□□ -0.63
HOXC4-202ENST00000430889 IGHV3-48P01763 117 aa11.13□□□□□ -0.63
HOXC4-202ENST00000430889 PRTN3P24158 256 aa11.13□□□□□ -0.63
HOXC4-202ENST00000430889 ACTL10Q5JWF8 245 aa11.13□□□□□ -0.63
HOXC4-202ENST00000430889 UNQ6494/PRO21346Q6UXR6 183 aa11.13□□□□□ -0.63
HOXC4-202ENST00000430889 ITLN2Q8WWU7 325 aaPredicted RBP11.13□□□□□ -0.63
HOXC4-202ENST00000430889 SRSF8Q9BRL6 282 aaKnown RBP11.13□□□□□ -0.63
HOXC4-202ENST00000430889 FBXL15Q9H469 300 aa11.13□□□□□ -0.63
HOXC4-202ENST00000430889 NCOR2Q9Y618 2525 aa11.13□□□□□ -0.63
HOXC4-202ENST00000430889 MDFIC2A0A1B0GVS7 189 aa11.12□□□□□ -0.63
HOXC4-202ENST00000430889 PPP5D1E7EU14 171 aa11.12□□□□□ -0.63
HOXC4-202ENST00000430889 CORTO00230 105 aa11.12□□□□□ -0.63
HOXC4-202ENST00000430889 FCN1O00602 326 aa11.12□□□□□ -0.63
HOXC4-202ENST00000430889 NDUFA3O95167 84 aa11.12□□□□□ -0.63
HOXC4-202ENST00000430889 HTR1DP28221 377 aa11.12□□□□□ -0.63
HOXC4-202ENST00000430889 RPL15P61313 204 aaKnown RBP11.12□□□□□ -0.63
HOXC4-202ENST00000430889 ARF6P62330 175 aa11.12□□□□□ -0.63
HOXC4-202ENST00000430889 COA6Q5JTJ3 125 aaKnown RBP11.12□□□□□ -0.63
HOXC4-202ENST00000430889 GFI1BQ5VTD9 330 aa11.12□□□□□ -0.63
HOXC4-202ENST00000430889 KCNIP4Q6PIL6 250 aa11.12□□□□□ -0.63
HOXC4-202ENST00000430889 C1orf122Q6ZSJ8 110 aa11.12□□□□□ -0.63
HOXC4-202ENST00000430889 KIR3DL3Q8N743 410 aa11.12□□□□□ -0.63
HOXC4-202ENST00000430889 ZNF355PQ9NSJ1 428 aa11.12□□□□□ -0.63
HOXC4-202ENST00000430889 DPM3Q9P2X0 92 aa11.12□□□□□ -0.63
HOXC4-202ENST00000430889 COX7A2P2O60397 106 aa11.11□□□□□ -0.63
HOXC4-202ENST00000430889 OR10J4P0C629 311 aa11.11□□□□□ -0.63
HOXC4-202ENST00000430889 CRYBB3P26998 211 aa11.11□□□□□ -0.63
HOXC4-202ENST00000430889 PLP1P60201 277 aa11.11□□□□□ -0.63
HOXC4-202ENST00000430889 C4orf17Q53FE4 359 aa11.11□□□□□ -0.63
HOXC4-202ENST00000430889 C10orf113Q5VZT2 155 aa11.11□□□□□ -0.63
HOXC4-202ENST00000430889 NPBQ8NG41 125 aa11.11□□□□□ -0.63
HOXC4-202ENST00000430889 OR5AU1Q8NGC0 362 aa11.11□□□□□ -0.63
HOXC4-202ENST00000430889 SRSF12Q8WXF0 261 aaKnown RBP11.11□□□□□ -0.63
HOXC4-202ENST00000430889 ITPR1Q14643 2758 aa11.11□□□□□ -0.63
HOXC4-202ENST00000430889 IGLV2-8P01709 118 aa11.11□□□□□ -0.63
HOXC4-202ENST00000430889 BPIFB3P59826 476 aa11.11□□□□□ -0.63
HOXC4-202ENST00000430889 KLRD1Q13241 179 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms