RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 MISP3Q96FF7 219 aa9.5□□□□□ -0.89
USP40-205ENST00000430158 WDR89Q96FK6 387 aaPredicted RBP9.5□□□□□ -0.89
USP40-205ENST00000430158 CHRDL1Q9BU40 450 aa9.5□□□□□ -0.89
USP40-205ENST00000430158 HIPK2Q9H2X6 1198 aa9.5□□□□□ -0.89
USP40-205ENST00000430158 C21orf62Q9NYP8 219 aa9.5□□□□□ -0.89
USP40-205ENST00000430158 ALG5Q9Y673 324 aa9.5□□□□□ -0.89
USP40-205ENST00000430158 SIX6O95475 246 aa9.49□□□□□ -0.89
USP40-205ENST00000430158 ZP3P21754 424 aa9.49□□□□□ -0.89
USP40-205ENST00000430158 H2BFSP57053 126 aa9.49□□□□□ -0.89
USP40-205ENST00000430158 SAMD5Q5TGI4 173 aa9.49□□□□□ -0.89
USP40-205ENST00000430158 RNASEH2CQ8TDP1 164 aaKnown RBP9.49□□□□□ -0.89
USP40-205ENST00000430158 SMIM8Q96KF7 97 aa9.49□□□□□ -0.89
USP40-205ENST00000430158 TXN2Q99757 166 aa9.49□□□□□ -0.89
USP40-205ENST00000430158 GSKIPQ9P0R6 139 aa9.49□□□□□ -0.89
USP40-205ENST00000430158 C5orf51A6NDU8 294 aa9.48□□□□□ -0.89
USP40-205ENST00000430158 PMS2P5A8MQ11 134 aa9.48□□□□□ -0.89
USP40-205ENST00000430158 CORTO00230 105 aa9.48□□□□□ -0.89
USP40-205ENST00000430158 WRBO00258 174 aa9.48□□□□□ -0.89
USP40-205ENST00000430158 TGOLN2O43493 480 aa9.48□□□□□ -0.89
USP40-205ENST00000430158 GGCTO75223 188 aaKnown RBP9.48□□□□□ -0.89
USP40-205ENST00000430158 OR2C1O95371 312 aa9.48□□□□□ -0.89
USP40-205ENST00000430158 IGLL1P15814 213 aa9.48□□□□□ -0.89
USP40-205ENST00000430158 GPR183P32249 361 aa9.48□□□□□ -0.89
USP40-205ENST00000430158 ARL3P36405 182 aa9.48□□□□□ -0.89
USP40-205ENST00000430158 MFAP4P55083 255 aa9.48□□□□□ -0.89
USP40-205ENST00000430158 PRSS54Q6PEW0 395 aa9.48□□□□□ -0.89
USP40-205ENST00000430158 GSG1LQ6UXU4 331 aa9.48□□□□□ -0.89
USP40-205ENST00000430158 GPHB5Q86YW7 130 aa9.48□□□□□ -0.89
USP40-205ENST00000430158 RCC1LQ96I51 464 aaKnown RBP9.48□□□□□ -0.89
USP40-205ENST00000430158 CIB3Q96Q77 187 aaPredicted RBP9.48□□□□□ -0.89
USP40-205ENST00000430158 ZNF436Q9C0F3 470 aaPredicted RBP9.48□□□□□ -0.89
USP40-205ENST00000430158 MEGF8Q7Z7M0 2845 aa9.48□□□□□ -0.89
USP40-205ENST00000430158 OR2T8A6NH00 312 aa9.47□□□□□ -0.89
USP40-205ENST00000430158 FAM25EA8MYX2 175 aa9.47□□□□□ -0.89
USP40-205ENST00000430158 K7EPK0 472 aa9.47□□□□□ -0.89
USP40-205ENST00000430158 GOSR2O14653 212 aa9.47□□□□□ -0.89
USP40-205ENST00000430158 OVOL1O14753 267 aa9.47□□□□□ -0.89
USP40-205ENST00000430158 LY86O95711 162 aa9.47□□□□□ -0.89
USP40-205ENST00000430158 IFNA10P01566 189 aa9.47□□□□□ -0.89
USP40-205ENST00000430158 CD33P20138 364 aa9.47□□□□□ -0.89
USP40-205ENST00000430158 SYNJ2BPP57105 145 aa9.47□□□□□ -0.89
USP40-205ENST00000430158 TAS2R30P59541 319 aa9.47□□□□□ -0.89
USP40-205ENST00000430158 CD69Q07108 199 aa9.47□□□□□ -0.89
USP40-205ENST00000430158 OXLD1Q5BKU9 147 aa9.47□□□□□ -0.89
USP40-205ENST00000430158 KPRPQ5T749 579 aaPredicted RBP9.47□□□□□ -0.89
USP40-205ENST00000430158 ACSM6Q6P461 480 aa9.47□□□□□ -0.89
USP40-205ENST00000430158 TMEM14EPQ6UXP3 125 aa9.47□□□□□ -0.89
USP40-205ENST00000430158 ADAMTSL5Q6ZMM2 481 aa9.47□□□□□ -0.89
USP40-205ENST00000430158 TMEM116Q8NCL8 245 aa9.47□□□□□ -0.89
USP40-205ENST00000430158 OR4X1Q8NH49 305 aa9.47□□□□□ -0.89
USP40-205ENST00000430158 PINX1Q96BK5 328 aaKnown RBP9.47□□□□□ -0.89
USP40-205ENST00000430158 BSCL2Q96G97 398 aaPredicted RBP9.47□□□□□ -0.89
USP40-205ENST00000430158 RAB40CQ96S21 281 aa9.47□□□□□ -0.89
USP40-205ENST00000430158 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.46□□□□□ -0.9
USP40-205ENST00000430158 G3V4G9 280 aa9.46□□□□□ -0.9
USP40-205ENST00000430158 LGALS9O00182 355 aa9.46□□□□□ -0.9
USP40-205ENST00000430158 SSSCA1O60232 199 aa9.46□□□□□ -0.9
USP40-205ENST00000430158 IGKV1-17P01599 117 aa9.46□□□□□ -0.9
USP40-205ENST00000430158 CXCL3P19876 107 aa9.46□□□□□ -0.9
USP40-205ENST00000430158 GPX4P36969 197 aaPredicted RBP9.46□□□□□ -0.9
USP40-205ENST00000430158 RAB32Q13637 225 aa9.46□□□□□ -0.9
USP40-205ENST00000430158 RPEL1Q2QD12 228 aa9.46□□□□□ -0.9
USP40-205ENST00000430158 SPSB3Q6PJ21 355 aa9.46□□□□□ -0.9
USP40-205ENST00000430158 UNQ9165/PRO28630Q6UXU0 137 aa9.46□□□□□ -0.9
USP40-205ENST00000430158 REC114Q7Z4M0 266 aa9.46□□□□□ -0.9
USP40-205ENST00000430158 NOXA1Q86UR1 476 aa9.46□□□□□ -0.9
USP40-205ENST00000430158 HAPLN4Q86UW8 402 aa9.46□□□□□ -0.9
USP40-205ENST00000430158 C1QL4Q86Z23 238 aa9.46□□□□□ -0.9
USP40-205ENST00000430158 NMES1Q9C002 83 aa9.46□□□□□ -0.9
USP40-205ENST00000430158 ZC4H2Q9NQZ6 224 aa9.46□□□□□ -0.9
USP40-205ENST00000430158 H0YIZ8 118 aa9.45□□□□□ -0.9
USP40-205ENST00000430158 H3BP45 60 aa9.45□□□□□ -0.9
USP40-205ENST00000430158 SSNA1O43805 119 aa9.45□□□□□ -0.9
USP40-205ENST00000430158 TSC22D2O75157 780 aa9.45□□□□□ -0.9
USP40-205ENST00000430158 CLN5O75503 358 aa9.45□□□□□ -0.9
USP40-205ENST00000430158 CCNKO75909 580 aa9.45□□□□□ -0.9
USP40-205ENST00000430158 SCGB1D2O95969 90 aa9.45□□□□□ -0.9
USP40-205ENST00000430158 CSN3P07498 182 aa9.45□□□□□ -0.9
USP40-205ENST00000430158 SLC25A4P12235 298 aa9.45□□□□□ -0.9
USP40-205ENST00000430158 OPRK1P41145 380 aa9.45□□□□□ -0.9
USP40-205ENST00000430158 FCN2Q15485 313 aa9.45□□□□□ -0.9
USP40-205ENST00000430158 BEAN1Q3B7T3 259 aa9.45□□□□□ -0.9
USP40-205ENST00000430158 SPANXN5Q5MJ07 72 aa9.45□□□□□ -0.9
USP40-205ENST00000430158 OR11H7Q8NGC8 314 aa9.45□□□□□ -0.9
USP40-205ENST00000430158 OR9G4Q8NGQ1 327 aa9.45□□□□□ -0.9
USP40-205ENST00000430158 CACNG8Q8WXS5 425 aa9.45□□□□□ -0.9
USP40-205ENST00000430158 KRTAP9-2Q9BYQ4 174 aa9.45□□□□□ -0.9
USP40-205ENST00000430158 GAR1Q9NY12 217 aaKnown RBP9.45□□□□□ -0.9
USP40-205ENST00000430158 PSENENQ9NZ42 101 aa9.45□□□□□ -0.9
USP40-205ENST00000430158 IGKV1D-37A0A075B6S9 117 aa9.44□□□□□ -0.9
USP40-205ENST00000430158 IGHV3-35A0A0C4DH35 117 aa9.44□□□□□ -0.9
USP40-205ENST00000430158 RPS10-NUDT3A0A1W2PQS6 291 aa9.44□□□□□ -0.9
USP40-205ENST00000430158 A8MWP6 167 aa9.44□□□□□ -0.9
USP40-205ENST00000430158 IGLC1P0CG04 106 aa9.44□□□□□ -0.9
USP40-205ENST00000430158 EDN2P20800 178 aa9.44□□□□□ -0.9
USP40-205ENST00000430158 NPBWR1P48145 328 aa9.44□□□□□ -0.9
USP40-205ENST00000430158 RND2P52198 227 aa9.44□□□□□ -0.9
USP40-205ENST00000430158 EGFEM1PQ0D2K5 195 aa9.44□□□□□ -0.9
USP40-205ENST00000430158 ARL16Q0P5N6 197 aa9.44□□□□□ -0.9
USP40-205ENST00000430158 GAMTQ14353 236 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms