RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 APOHP02749 345 aaPredicted RBP9.54□□□□□ -0.88
HLA-F-219ENST00000429294 EIF2B2P49770 351 aaKnown RBP9.54□□□□□ -0.88
HLA-F-219ENST00000429294 LILRB2Q8N423 598 aa9.54□□□□□ -0.88
HLA-F-219ENST00000429294 SLC35G3Q8N808 338 aa9.54□□□□□ -0.88
HLA-F-219ENST00000429294 Q8NAQ8 132 aa9.54□□□□□ -0.88
HLA-F-219ENST00000429294 MRGPRFQ96AM1 343 aa9.54□□□□□ -0.88
HLA-F-219ENST00000429294 GRAMD2BQ96HH9 432 aa9.54□□□□□ -0.88
HLA-F-219ENST00000429294 NAA50Q9GZZ1 169 aaKnown RBP9.54□□□□□ -0.88
HLA-F-219ENST00000429294 TMEM50AO95807 157 aa9.53□□□□□ -0.88
HLA-F-219ENST00000429294 IFNA17P01571 189 aa9.53□□□□□ -0.88
HLA-F-219ENST00000429294 LYSMD2Q8IV50 215 aa9.53□□□□□ -0.88
HLA-F-219ENST00000429294 TMEM230Q96A57 120 aa9.53□□□□□ -0.88
HLA-F-219ENST00000429294 ZFAND3Q9H8U3 227 aa9.53□□□□□ -0.88
HLA-F-219ENST00000429294 ENY2Q9NPA8 101 aa9.53□□□□□ -0.88
HLA-F-219ENST00000429294 IGHV4-4A0A075B6R2 117 aa9.52□□□□□ -0.89
HLA-F-219ENST00000429294 RBMY1A1P0DJD3 496 aaKnown RBP9.52□□□□□ -0.89
HLA-F-219ENST00000429294 RBMY1CP0DJD4 496 aa9.52□□□□□ -0.89
HLA-F-219ENST00000429294 P2RY1P47900 373 aa9.52□□□□□ -0.89
HLA-F-219ENST00000429294 AKR1C2P52895 323 aa9.52□□□□□ -0.89
HLA-F-219ENST00000429294 UCP3P55916 312 aa9.52□□□□□ -0.89
HLA-F-219ENST00000429294 RBMY1FQ15415 496 aaKnown RBP9.52□□□□□ -0.89
HLA-F-219ENST00000429294 SPINK9Q5DT21 86 aa9.52□□□□□ -0.89
HLA-F-219ENST00000429294 PVRIGQ6DKI7 326 aa9.52□□□□□ -0.89
HLA-F-219ENST00000429294 Q6ZTC4 211 aa9.52□□□□□ -0.89
HLA-F-219ENST00000429294 TRPT1Q86TN4 253 aaKnown RBP9.52□□□□□ -0.89
HLA-F-219ENST00000429294 FAM24BQ8N5W8 94 aa9.52□□□□□ -0.89
HLA-F-219ENST00000429294 S100ZQ8WXG8 99 aa9.52□□□□□ -0.89
HLA-F-219ENST00000429294 RNF126Q9BV68 326 aa9.52□□□□□ -0.89
HLA-F-219ENST00000429294 SCPEP1Q9HB40 452 aa9.52□□□□□ -0.89
HLA-F-219ENST00000429294 TBC1D24Q9ULP9 559 aa9.52□□□□□ -0.89
HLA-F-219ENST00000429294 A0A1B0GU03 582 aa9.51□□□□□ -0.89
HLA-F-219ENST00000429294 HELTA6NFD8 242 aa9.51□□□□□ -0.89
HLA-F-219ENST00000429294 ZNF705EA8MWA4 302 aaPredicted RBP9.51□□□□□ -0.89
HLA-F-219ENST00000429294 INS-IGF2F8WCM5 200 aa9.51□□□□□ -0.89
HLA-F-219ENST00000429294 K7EQG2 157 aa9.51□□□□□ -0.89
HLA-F-219ENST00000429294 CLN5O75503 358 aa9.51□□□□□ -0.89
HLA-F-219ENST00000429294 IGKV1-39P01597 117 aa9.51□□□□□ -0.89
HLA-F-219ENST00000429294 IGKV1D-39P04432 117 aa9.51□□□□□ -0.89
HLA-F-219ENST00000429294 ZNF688P0C7X2 276 aa9.51□□□□□ -0.89
HLA-F-219ENST00000429294 PGAM2P15259 253 aa9.51□□□□□ -0.89
HLA-F-219ENST00000429294 ZNF182P17025 639 aaPredicted RBP9.51□□□□□ -0.89
HLA-F-219ENST00000429294 OPRK1P41145 380 aa9.51□□□□□ -0.89
HLA-F-219ENST00000429294 HOXA1P49639 335 aaPredicted RBP9.51□□□□□ -0.89
HLA-F-219ENST00000429294 NUTF2P61970 127 aaKnown RBP9.51□□□□□ -0.89
HLA-F-219ENST00000429294 ACTL10Q5JWF8 245 aa9.51□□□□□ -0.89
HLA-F-219ENST00000429294 GPX8Q8TED1 209 aa9.51□□□□□ -0.89
HLA-F-219ENST00000429294 C1QTNF4Q9BXJ3 329 aa9.51□□□□□ -0.89
HLA-F-219ENST00000429294 CCDC59Q9P031 241 aaKnown RBP9.51□□□□□ -0.89
HLA-F-219ENST00000429294 KIAA1109Q2LD37 5005 aa9.51□□□□□ -0.89
HLA-F-219ENST00000429294 TRAV30A0A087WSZ9 112 aa9.5□□□□□ -0.89
HLA-F-219ENST00000429294 KNCNA6PVL3 124 aa9.5□□□□□ -0.89
HLA-F-219ENST00000429294 P0DMU3 169 aa9.5□□□□□ -0.89
HLA-F-219ENST00000429294 FAM231AP0DMU4 169 aa9.5□□□□□ -0.89
HLA-F-219ENST00000429294 FAM231CP0DMU5 169 aa9.5□□□□□ -0.89
HLA-F-219ENST00000429294 NPY1RP25929 384 aa9.5□□□□□ -0.89
HLA-F-219ENST00000429294 CRYBB3P26998 211 aa9.5□□□□□ -0.89
HLA-F-219ENST00000429294 RCVRNP35243 200 aa9.5□□□□□ -0.89
HLA-F-219ENST00000429294 RPS19P39019 145 aaKnown RBP9.5□□□□□ -0.89
HLA-F-219ENST00000429294 AP2S1P53680 142 aaPredicted RBP9.5□□□□□ -0.89
HLA-F-219ENST00000429294 SPCS2Q15005 226 aa9.5□□□□□ -0.89
HLA-F-219ENST00000429294 OR4X1Q8NH49 305 aa9.5□□□□□ -0.89
HLA-F-219ENST00000429294 RNASE11Q8TAA1 199 aaKnown RBP9.5□□□□□ -0.89
HLA-F-219ENST00000429294 DYNC2LI1Q8TCX1 351 aa9.5□□□□□ -0.89
HLA-F-219ENST00000429294 ZNF486Q96H40 463 aaPredicted RBP9.5□□□□□ -0.89
HLA-F-219ENST00000429294 DNAH6Q9C0G6 4158 aa9.5□□□□□ -0.89
HLA-F-219ENST00000429294 DEFB131BA0A096LNP1 70 aa9.49□□□□□ -0.89
HLA-F-219ENST00000429294 RPS10-NUDT3A0A1W2PQS6 291 aa9.49□□□□□ -0.89
HLA-F-219ENST00000429294 GIG44P09565 113 aaPredicted RBP9.49□□□□□ -0.89
HLA-F-219ENST00000429294 ETV6P41212 452 aa9.49□□□□□ -0.89
HLA-F-219ENST00000429294 DHRS2Q13268 280 aa9.49□□□□□ -0.89
HLA-F-219ENST00000429294 IZUMO4Q1ZYL8 232 aa9.49□□□□□ -0.89
HLA-F-219ENST00000429294 SNX29P2Q8IUI4 249 aa9.49□□□□□ -0.89
HLA-F-219ENST00000429294 RRNAD1Q96FB5 475 aaKnown RBP9.49□□□□□ -0.89
HLA-F-219ENST00000429294 NDUFAF3Q9BU61 184 aa9.49□□□□□ -0.89
HLA-F-219ENST00000429294 WDR12Q9GZL7 423 aaKnown RBP9.49□□□□□ -0.89
HLA-F-219ENST00000429294 CLEC5AQ9NY25 188 aa9.49□□□□□ -0.89
HLA-F-219ENST00000429294 X6R8D5 127 aa9.49□□□□□ -0.89
HLA-F-219ENST00000429294 PCLOQ9Y6V0 5065 aa9.48□□□□□ -0.89
HLA-F-219ENST00000429294 ELOA3CA0A087WX78 387 aaPredicted RBP9.48□□□□□ -0.89
HLA-F-219ENST00000429294 A0A0B4J293 547 aa9.48□□□□□ -0.89
HLA-F-219ENST00000429294 APOA1P02647 267 aa9.48□□□□□ -0.89
HLA-F-219ENST00000429294 AMBPP02760 352 aa9.48□□□□□ -0.89
HLA-F-219ENST00000429294 MED14OSP0DP75 135 aa9.48□□□□□ -0.89
HLA-F-219ENST00000429294 RNASE2P10153 161 aaKnown RBP9.48□□□□□ -0.89
HLA-F-219ENST00000429294 C4BPBP20851 252 aa9.48□□□□□ -0.89
HLA-F-219ENST00000429294 PPP5CP53041 499 aa9.48□□□□□ -0.89
HLA-F-219ENST00000429294 PIGPP57054 158 aa9.48□□□□□ -0.89
HLA-F-219ENST00000429294 RND3P61587 244 aa9.48□□□□□ -0.89
HLA-F-219ENST00000429294 VBP1P61758 197 aa9.48□□□□□ -0.89
HLA-F-219ENST00000429294 LSM3P62310 102 aaKnown RBP9.48□□□□□ -0.89
HLA-F-219ENST00000429294 SNRPD3P62318 126 aaKnown RBP9.48□□□□□ -0.89
HLA-F-219ENST00000429294 ZNF846Q147U1 533 aa9.48□□□□□ -0.89
HLA-F-219ENST00000429294 TRIM16LQ309B1 348 aa9.48□□□□□ -0.89
HLA-F-219ENST00000429294 POM121L12Q8N7R1 296 aa9.48□□□□□ -0.89
HLA-F-219ENST00000429294 DCANP1Q8TF63 244 aa9.48□□□□□ -0.89
HLA-F-219ENST00000429294 Q8WTZ3 238 aa9.48□□□□□ -0.89
HLA-F-219ENST00000429294 COMMD3Q9UBI1 195 aa9.48□□□□□ -0.89
HLA-F-219ENST00000429294 MUC4Q99102 2169 aa9.48□□□□□ -0.89
HLA-F-219ENST00000429294 IGKV1-5P01602 117 aa9.47□□□□□ -0.89
HLA-F-219ENST00000429294 TGFBR1P36897 503 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms