RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 TCF15Q12870 199 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 GUSBP1Q15486 140 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 OR9G4Q8NGQ1 327 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 VGLL1Q99990 258 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 GGTLC1Q9BX51 225 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 JPT1Q9UK76 154 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 SOX21Q9Y651 276 aaPredicted RBP12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 ARHGAP21Q5T5U3 1957 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 PGLYRP1O75594 196 aaPredicted RBP12□□□□□ -0.49
SYNGAP1-203ENST00000428982 COX8AP10176 69 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 TFF3Q07654 80 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 H2BFWTQ7Z2G1 175 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 VCX2Q9H322 139 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 CTNNBIP1Q9NSA3 81 aaPredicted RBP12□□□□□ -0.49
SYNGAP1-203ENST00000428982 NHP2Q9NX24 153 aaKnown RBP12□□□□□ -0.49
SYNGAP1-203ENST00000428982 ZFHX2Q9C0A1 2572 aaPredicted RBP12□□□□□ -0.49
SYNGAP1-203ENST00000428982 ACTL6BO94805 426 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 IGKV1D-33P01593 117 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 IGKV1-33P01594 117 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 TMEM42Q69YG0 159 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 NHLRC2Q8NBF2 726 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 TNFRSF19Q9NS68 423 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 RTTNQ86VV8 2226 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 OR9G9P0C7N8 305 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 Q6ZSR3 168 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 ARPC1AQ92747 370 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 A0A1W2PRE2 83 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 J3QT63 122 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 WISP1O95388 367 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 PAX9P55771 341 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 ARL16Q0P5N6 197 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 GAGE2BQ13066 116 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 IGFBP7Q16270 282 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 GAGE2EQ4V326 116 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 SH2D6Q7Z4S9 175 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 TMEM140Q9NV12 185 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 GAGE2DQ9UEU5 116 aa12□□□□□ -0.49
SYNGAP1-203ENST00000428982 MUC6Q6W4X9 2439 aa11.99□□□□□ -0.49
SYNGAP1-203ENST00000428982 RPL32P62910 135 aaKnown RBP11.99□□□□□ -0.49
SYNGAP1-203ENST00000428982 SSBP2P81877 361 aaPredicted RBP11.99□□□□□ -0.49
SYNGAP1-203ENST00000428982 LIME1Q9H400 295 aa11.99□□□□□ -0.49
SYNGAP1-203ENST00000428982 ZIC3O60481 467 aa11.99□□□□□ -0.49
SYNGAP1-203ENST00000428982 ID1P41134 155 aa11.99□□□□□ -0.49
SYNGAP1-203ENST00000428982 TMPRSS3P57727 454 aa11.99□□□□□ -0.49
SYNGAP1-203ENST00000428982 ANXA2RQ3ZCQ2 193 aa11.99□□□□□ -0.49
SYNGAP1-203ENST00000428982 SPATA12Q7Z6I5 190 aa11.99□□□□□ -0.49
SYNGAP1-203ENST00000428982 PIP4P1Q86T03 277 aa11.99□□□□□ -0.49
SYNGAP1-203ENST00000428982 DUSP13Q9UII6 198 aa11.99□□□□□ -0.49
SYNGAP1-203ENST00000428982 SCTP09683 121 aa11.99□□□□□ -0.49
SYNGAP1-203ENST00000428982 RABAC1Q9UI14 185 aa11.99□□□□□ -0.49
SYNGAP1-203ENST00000428982 ERG28Q9UKR5 140 aa11.99□□□□□ -0.49
SYNGAP1-203ENST00000428982 A0A096LPE4 126 aa11.98□□□□□ -0.49
SYNGAP1-203ENST00000428982 A0A1W2PPZ6 126 aa11.98□□□□□ -0.49
SYNGAP1-203ENST00000428982 TMEM30CPA0ZSE6 113 aa11.98□□□□□ -0.49
SYNGAP1-203ENST00000428982 SPATA31B1PQ5VZV4 182 aa11.98□□□□□ -0.49
SYNGAP1-203ENST00000428982 UFSP1Q6NVU6 142 aa11.98□□□□□ -0.49
SYNGAP1-203ENST00000428982 C1QTNF5Q9BXJ0 243 aa11.98□□□□□ -0.49
SYNGAP1-203ENST00000428982 HES7Q9BYE0 225 aa11.98□□□□□ -0.49
SYNGAP1-203ENST00000428982 SPINK9Q5DT21 86 aa11.98□□□□□ -0.49
SYNGAP1-203ENST00000428982 SRXN1Q9BYN0 137 aa11.98□□□□□ -0.49
SYNGAP1-203ENST00000428982 OSTCQ9NRP0 149 aa11.98□□□□□ -0.49
SYNGAP1-203ENST00000428982 COL4A2P08572 1712 aa11.98□□□□□ -0.49
SYNGAP1-203ENST00000428982 ZNF137PP52743 207 aa11.98□□□□□ -0.49
SYNGAP1-203ENST00000428982 PSG5Q15238 335 aa11.98□□□□□ -0.49
SYNGAP1-203ENST00000428982 COLCA1Q6ZS62 124 aa11.98□□□□□ -0.49
SYNGAP1-203ENST00000428982 FDCSPQ8NFU4 85 aa11.98□□□□□ -0.49
SYNGAP1-203ENST00000428982 GPR82Q96P67 336 aa11.98□□□□□ -0.49
SYNGAP1-203ENST00000428982 IL36RNQ9UBH0 155 aa11.98□□□□□ -0.49
SYNGAP1-203ENST00000428982 PROCRQ9UNN8 238 aa11.98□□□□□ -0.49
SYNGAP1-203ENST00000428982 PHF3Q92576 2039 aaKnown RBP11.98□□□□□ -0.49
SYNGAP1-203ENST00000428982 TRGV10A0A0A0MS01 117 aa11.97□□□□□ -0.49
SYNGAP1-203ENST00000428982 SCNM1Q9BWG6 230 aa11.97□□□□□ -0.49
SYNGAP1-203ENST00000428982 C1QTNF4Q9BXJ3 329 aa11.97□□□□□ -0.49
SYNGAP1-203ENST00000428982 ZNF71Q9NQZ8 489 aaPredicted RBP11.97□□□□□ -0.49
SYNGAP1-203ENST00000428982 SHANK1Q9Y566 2161 aa11.97□□□□□ -0.49
SYNGAP1-203ENST00000428982 SCRT2Q9NQ03 307 aa11.97□□□□□ -0.49
SYNGAP1-203ENST00000428982 PCDH15Q96QU1 1955 aa11.97□□□□□ -0.49
SYNGAP1-203ENST00000428982 ZNF716A6NP11 495 aa11.97□□□□□ -0.49
SYNGAP1-203ENST00000428982 H3BVH4 76 aa11.97□□□□□ -0.49
SYNGAP1-203ENST00000428982 SPINT2O43291 252 aa11.97□□□□□ -0.49
SYNGAP1-203ENST00000428982 CT45A10P0DMU9 189 aa11.97□□□□□ -0.49
SYNGAP1-203ENST00000428982 SPINK2P20155 84 aa11.97□□□□□ -0.49
SYNGAP1-203ENST00000428982 WFDC2Q14508 124 aa11.97□□□□□ -0.49
SYNGAP1-203ENST00000428982 SSMEM1Q8WWF3 244 aa11.97□□□□□ -0.49
SYNGAP1-203ENST00000428982 CYYR1Q96J86 154 aa11.97□□□□□ -0.49
SYNGAP1-203ENST00000428982 TRAV5A0A0B4J249 113 aa11.97□□□□□ -0.49
SYNGAP1-203ENST00000428982 SH2D7A6NKC9 451 aaPredicted RBP11.97□□□□□ -0.49
SYNGAP1-203ENST00000428982 NPPCP23582 126 aa11.97□□□□□ -0.49
SYNGAP1-203ENST00000428982 HES4Q9HCC6 221 aa11.97□□□□□ -0.49
SYNGAP1-203ENST00000428982 TMEM167BQ9NRX6 74 aa11.97□□□□□ -0.49
SYNGAP1-203ENST00000428982 JMJD8Q96S16 334 aa11.96□□□□□ -0.49
SYNGAP1-203ENST00000428982 ZNF816Q0VGE8 651 aaPredicted RBP11.96□□□□□ -0.49
SYNGAP1-203ENST00000428982 C3AR1Q16581 482 aa11.96□□□□□ -0.49
SYNGAP1-203ENST00000428982 GFRALQ6UXV0 394 aa11.96□□□□□ -0.49
SYNGAP1-203ENST00000428982 ASCL5Q7RTU5 278 aa11.96□□□□□ -0.49
SYNGAP1-203ENST00000428982 CHCHD1Q96BP2 118 aaKnown RBP11.96□□□□□ -0.49
SYNGAP1-203ENST00000428982 SPATA25Q9BR10 227 aa11.96□□□□□ -0.49
SYNGAP1-203ENST00000428982 NDFIP1Q9BT67 221 aa11.96□□□□□ -0.49
SYNGAP1-203ENST00000428982 TPPP3Q9BW30 176 aa11.96□□□□□ -0.49
SYNGAP1-203ENST00000428982 OBP2BQ9NPH6 170 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms