RNA–Protein interactions for RNA: ENST00000428956.6

C4A-243, Transcript of complement C4A (Rodgers blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4A, Length 5,460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-243ENST00000428956 NXT2Q9NPJ8 142 aaKnown RBP13.12□□□□□ -0.31
C4A-243ENST00000428956 CLPSP04118 112 aa13.12□□□□□ -0.31
C4A-243ENST00000428956 SCGB1A1P11684 91 aa13.12□□□□□ -0.31
C4A-243ENST00000428956 C18orf15Q96N68 181 aa13.12□□□□□ -0.31
C4A-243ENST00000428956 C9orf172C9J069 976 aa13.11□□□□□ -0.31
C4A-243ENST00000428956 GGNQ86UU5 652 aa13.11□□□□□ -0.31
C4A-243ENST00000428956 RNF125Q96EQ8 232 aa13.11□□□□□ -0.31
C4A-243ENST00000428956 TMEM14EPQ6UXP3 125 aa13.11□□□□□ -0.31
C4A-243ENST00000428956 PNRC2Q9NPJ4 139 aaKnown RBP13.11□□□□□ -0.31
C4A-243ENST00000428956 TNFRSF18Q9Y5U5 241 aa13.11□□□□□ -0.31
C4A-243ENST00000428956 M0R381 172 aa13.11□□□□□ -0.31
C4A-243ENST00000428956 IGKV3-15P01624 115 aa13.11□□□□□ -0.31
C4A-243ENST00000428956 LINC00614P0C842 121 aa13.11□□□□□ -0.31
C4A-243ENST00000428956 DMRTA1Q5VZB9 504 aa13.11□□□□□ -0.31
C4A-243ENST00000428956 TREML4Q6UXN2 200 aa13.11□□□□□ -0.31
C4A-243ENST00000428956 SCN2AQ99250 2005 aa13.11□□□□□ -0.31
C4A-243ENST00000428956 HBDP02042 147 aa13.1□□□□□ -0.31
C4A-243ENST00000428956 TIMP3P35625 211 aa13.1□□□□□ -0.31
C4A-243ENST00000428956 NUTF2P61970 127 aaKnown RBP13.1□□□□□ -0.31
C4A-243ENST00000428956 CACNG7P62955 275 aa13.1□□□□□ -0.31
C4A-243ENST00000428956 LINC00469Q8N7U9 141 aa13.1□□□□□ -0.31
C4A-243ENST00000428956 SRRM5B3KS81 715 aa13.1□□□□□ -0.31
C4A-243ENST00000428956 SPCS1Q9Y6A9 102 aa13.1□□□□□ -0.31
C4A-243ENST00000428956 H3BRM9 83 aa13.1□□□□□ -0.31
C4A-243ENST00000428956 GLRX5Q86SX6 157 aa13.1□□□□□ -0.31
C4A-243ENST00000428956 C2orf88Q9BSF0 95 aa13.1□□□□□ -0.31
C4A-243ENST00000428956 CCL19Q99731 98 aa13.09□□□□□ -0.31
C4A-243ENST00000428956 GGTLC1Q9BX51 225 aa13.09□□□□□ -0.31
C4A-243ENST00000428956 IGHV1-18A0A0C4DH31 117 aa13.09□□□□□ -0.31
C4A-243ENST00000428956 C8orf46Q8TAG6 207 aa13.09□□□□□ -0.31
C4A-243ENST00000428956 FGFBP3Q8TAT2 258 aa13.09□□□□□ -0.31
C4A-243ENST00000428956 RPUSD1Q9UJJ7 312 aaKnown RBP13.09□□□□□ -0.31
C4A-243ENST00000428956 PSG8Q9UQ74 426 aa13.09□□□□□ -0.31
C4A-243ENST00000428956 FOXL2NBQ6ZUU3 175 aa13.09□□□□□ -0.31
C4A-243ENST00000428956 JKAMPQ9P055 326 aa13.09□□□□□ -0.31
C4A-243ENST00000428956 TET1Q8NFU7 2136 aa13.09□□□□□ -0.31
C4A-243ENST00000428956 IGHV3-35A0A0C4DH35 117 aa13.09□□□□□ -0.31
C4A-243ENST00000428956 A0A1B0GV72 72 aa13.09□□□□□ -0.31
C4A-243ENST00000428956 CCL3L1P16619 93 aa13.09□□□□□ -0.31
C4A-243ENST00000428956 CENPVQ7Z7K6 275 aaPredicted RBP13.09□□□□□ -0.31
C4A-243ENST00000428956 ST20Q9HBF5 79 aa13.09□□□□□ -0.31
C4A-243ENST00000428956 FAM186AA6NE01 2351 aa13.09□□□□□ -0.31
C4A-243ENST00000428956 IGKV1-27A0A075B6S5 117 aa13.09□□□□□ -0.31
C4A-243ENST00000428956 DNAL4O96015 105 aa13.09□□□□□ -0.31
C4A-243ENST00000428956 OR5AN1Q8NGI8 311 aa13.09□□□□□ -0.31
C4A-243ENST00000428956 RNASE6Q93091 150 aaKnown RBP13.09□□□□□ -0.31
C4A-243ENST00000428956 ANK1P16157 1881 aa13.08□□□□□ -0.32
C4A-243ENST00000428956 MS4A6AQ9H2W1 248 aa13.08□□□□□ -0.32
C4A-243ENST00000428956 VSIRQ9H7M9 311 aa13.08□□□□□ -0.32
C4A-243ENST00000428956 TNFSF13O75888 250 aa13.08□□□□□ -0.32
C4A-243ENST00000428956 TMEM101Q96IK0 257 aa13.08□□□□□ -0.32
C4A-243ENST00000428956 AHCTF1Q8WYP5 2266 aa13.08□□□□□ -0.32
C4A-243ENST00000428956 DNAJC13O75165 2243 aa13.08□□□□□ -0.32
C4A-243ENST00000428956 F2Z2F3 143 aa13.08□□□□□ -0.32
C4A-243ENST00000428956 CXCL1P09341 107 aa13.08□□□□□ -0.32
C4A-243ENST00000428956 TPRP12270 2363 aaKnown RBP13.08□□□□□ -0.32
C4A-243ENST00000428956 ALPK2Q86TB3 2170 aa13.08□□□□□ -0.32
C4A-243ENST00000428956 SUMO2P61956 95 aaKnown RBP13.07□□□□□ -0.32
C4A-243ENST00000428956 RNF5Q99942 180 aa13.07□□□□□ -0.32
C4A-243ENST00000428956 IGHV3OR16-12A0A075B7B8 117 aa13.07□□□□□ -0.32
C4A-243ENST00000428956 GNG5P63218 68 aa13.07□□□□□ -0.32
C4A-243ENST00000428956 SCN8AQ9UQD0 1980 aa13.07□□□□□ -0.32
C4A-243ENST00000428956 LEPP41159 167 aa13.07□□□□□ -0.32
C4A-243ENST00000428956 PGPEP1LA6NFU8 196 aa13.07□□□□□ -0.32
C4A-243ENST00000428956 AMBPP02760 352 aa13.07□□□□□ -0.32
C4A-243ENST00000428956 ASCL4Q6XD76 172 aa13.07□□□□□ -0.32
C4A-243ENST00000428956 SLC25A2Q9BXI2 301 aa13.07□□□□□ -0.32
C4A-243ENST00000428956 A0A1B0GWB2 263 aa13.06□□□□□ -0.32
C4A-243ENST00000428956 SRSF1Q07955 248 aaKnown RBP eCLIP13.06□□□□□ -0.32
C4A-243ENST00000428956 FOXF2Q12947 444 aa13.06□□□□□ -0.32
C4A-243ENST00000428956 MRPL52Q86TS9 123 aaKnown RBP13.06□□□□□ -0.32
C4A-243ENST00000428956 SPRR3Q9UBC9 169 aa13.06□□□□□ -0.32
C4A-243ENST00000428956 SMPXQ9UHP9 88 aa13.06□□□□□ -0.32
C4A-243ENST00000428956 DOCK6Q96HP0 2047 aa13.06□□□□□ -0.32
C4A-243ENST00000428956 CLEC19AQ6UXS0 136 aa13.06□□□□□ -0.32
C4A-243ENST00000428956 SLC25A48Q6ZT89 311 aaKnown RBP13.06□□□□□ -0.32
C4A-243ENST00000428956 SPOCK3Q9BQ16 436 aa13.06□□□□□ -0.32
C4A-243ENST00000428956 PLSCR4Q9NRQ2 329 aa13.06□□□□□ -0.32
C4A-243ENST00000428956 PINLYPA6NC86 204 aa13.06□□□□□ -0.32
C4A-243ENST00000428956 IGHV3-23P01764 117 aa13.06□□□□□ -0.32
C4A-243ENST00000428956 ORMDL2Q53FV1 153 aa13.06□□□□□ -0.32
C4A-243ENST00000428956 LINC01551Q86U37 167 aa13.06□□□□□ -0.32
C4A-243ENST00000428956 OR5A1Q8NGJ0 315 aa13.06□□□□□ -0.32
C4A-243ENST00000428956 PYYP10082 97 aa13.06□□□□□ -0.32
C4A-243ENST00000428956 MRAP2Q96G30 205 aa13.06□□□□□ -0.32
C4A-243ENST00000428956 DPM2O94777 84 aa13.06□□□□□ -0.32
C4A-243ENST00000428956 TMEM50AO95807 157 aa13.06□□□□□ -0.32
C4A-243ENST00000428956 MYOD1P15172 320 aa13.06□□□□□ -0.32
C4A-243ENST00000428956 SEC11AP67812 179 aa13.06□□□□□ -0.32
C4A-243ENST00000428956 ST6GALNAC6Q969X2 333 aa13.06□□□□□ -0.32
C4A-243ENST00000428956 ZSWIM8A7E2V4 1837 aa13.05□□□□□ -0.32
C4A-243ENST00000428956 IGHV3OR16-13A0A075B7E8 117 aa13.05□□□□□ -0.32
C4A-243ENST00000428956 IGHV3-74A0A0B4J1X5 117 aa13.05□□□□□ -0.32
C4A-243ENST00000428956 IL18BPO95998 194 aa13.05□□□□□ -0.32
C4A-243ENST00000428956 TRAV21A0A0B4J279 112 aa13.05□□□□□ -0.32
C4A-243ENST00000428956 FNDC10F2Z333 226 aa13.05□□□□□ -0.32
C4A-243ENST00000428956 IGKV1-5P01602 117 aa13.05□□□□□ -0.32
C4A-243ENST00000428956 RPP25LQ8N5L8 163 aaKnown RBP13.05□□□□□ -0.32
C4A-243ENST00000428956 IGHV1-46P01743 117 aa13.05□□□□□ -0.32
C4A-243ENST00000428956 ARL6IP6Q8N6S5 226 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms