RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 LINC00271P0C7V0 271 aa7.48□□□□□ -1.21
CTNND1-208ENST00000428599 ZNF250P15622 560 aa7.48□□□□□ -1.21
CTNND1-208ENST00000428599 MORN3Q6PF18 240 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-208ENST00000428599 TRAV41A0A0B4J266 112 aa7.48□□□□□ -1.21
CTNND1-208ENST00000428599 A0A1B0GV72 72 aa7.48□□□□□ -1.21
CTNND1-208ENST00000428599 C17orf98A8MV24 154 aa7.48□□□□□ -1.21
CTNND1-208ENST00000428599 TMEM14DPA8MWL7 114 aa7.48□□□□□ -1.21
CTNND1-208ENST00000428599 LINC00587B1AMM8 73 aa7.48□□□□□ -1.21
CTNND1-208ENST00000428599 RAMP1O60894 148 aa7.48□□□□□ -1.21
CTNND1-208ENST00000428599 OR9G9P0C7N8 305 aa7.48□□□□□ -1.21
CTNND1-208ENST00000428599 RNF125Q96EQ8 232 aa7.48□□□□□ -1.21
CTNND1-208ENST00000428599 SLC25A2Q9BXI2 301 aa7.48□□□□□ -1.21
CTNND1-208ENST00000428599 HAPLN4Q86UW8 402 aa7.48□□□□□ -1.21
CTNND1-208ENST00000428599 ZNF257Q9Y2Q1 563 aa7.48□□□□□ -1.21
CTNND1-208ENST00000428599 IGLV3-12A0A075B6K2 115 aa7.48□□□□□ -1.21
CTNND1-208ENST00000428599 PLNP26678 52 aa7.48□□□□□ -1.21
CTNND1-208ENST00000428599 PSG7Q13046 419 aa7.48□□□□□ -1.21
CTNND1-208ENST00000428599 FBLN7Q53RD9 439 aa7.48□□□□□ -1.21
CTNND1-208ENST00000428599 SIGLEC15Q6ZMC9 328 aa7.48□□□□□ -1.21
CTNND1-208ENST00000428599 RNF166Q96A37 237 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-208ENST00000428599 REPIN1Q9BWE0 567 aaKnown RBP7.48□□□□□ -1.21
CTNND1-208ENST00000428599 C1QTNF5Q9BXJ0 243 aa7.48□□□□□ -1.21
CTNND1-208ENST00000428599 EREGO14944 169 aa7.47□□□□□ -1.21
CTNND1-208ENST00000428599 IGHV4-39P01824 125 aa7.47□□□□□ -1.21
CTNND1-208ENST00000428599 CBLN1P23435 193 aa7.47□□□□□ -1.21
CTNND1-208ENST00000428599 EFNB1P98172 346 aa7.47□□□□□ -1.21
CTNND1-208ENST00000428599 FLVCR1-AS1Q8TAF5 88 aa7.47□□□□□ -1.21
CTNND1-208ENST00000428599 EP300Q09472 2414 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-208ENST00000428599 NTN3O00634 580 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-208ENST00000428599 EFNA4P52798 201 aa7.47□□□□□ -1.21
CTNND1-208ENST00000428599 SRSF7Q16629 238 aaKnown RBP eCLIP7.47□□□□□ -1.211e-6■■□□□ 13.9
CTNND1-208ENST00000428599 ORMDL2Q53FV1 153 aa7.47□□□□□ -1.21
CTNND1-208ENST00000428599 UPK2O00526 184 aa7.47□□□□□ -1.21
CTNND1-208ENST00000428599 CFHR1Q03591 330 aa7.47□□□□□ -1.21
CTNND1-208ENST00000428599 CNOT1A5YKK6 2376 aaKnown RBP7.47□□□□□ -1.21
CTNND1-208ENST00000428599 SAA2-SAA4A0A096LPE2 208 aa7.47□□□□□ -1.21
CTNND1-208ENST00000428599 B4DSR2 109 aa7.47□□□□□ -1.21
CTNND1-208ENST00000428599 SAA2P0DJI9 122 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-208ENST00000428599 CCL3L1P16619 93 aa7.47□□□□□ -1.21
CTNND1-208ENST00000428599 RCHY1Q96PM5 261 aa7.47□□□□□ -1.21
CTNND1-208ENST00000428599 C1QTNF4Q9BXJ3 329 aa7.47□□□□□ -1.21
CTNND1-208ENST00000428599 RPL32P62910 135 aaKnown RBP7.47□□□□□ -1.21
CTNND1-208ENST00000428599 TFF3Q07654 80 aa7.47□□□□□ -1.21
CTNND1-208ENST00000428599 NPDC1Q9NQX5 325 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-208ENST00000428599 FNDC1Q4ZHG4 1894 aaPredicted RBP7.46□□□□□ -1.21
CTNND1-208ENST00000428599 IZUMO1RA6ND01 250 aa7.46□□□□□ -1.21
CTNND1-208ENST00000428599 ELF5Q9UKW6 265 aaPredicted RBP7.46□□□□□ -1.21
CTNND1-208ENST00000428599 ARID1AO14497 2285 aa7.46□□□□□ -1.21
CTNND1-208ENST00000428599 HBDP02042 147 aa7.46□□□□□ -1.21
CTNND1-208ENST00000428599 SLC25A38Q96DW6 304 aa7.46□□□□□ -1.21
CTNND1-208ENST00000428599 CRIM1Q9NZV1 1036 aa7.46□□□□□ -1.21
CTNND1-208ENST00000428599 LINC01549A6NIU2 74 aa7.46□□□□□ -1.22
CTNND1-208ENST00000428599 TBX6O95947 436 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-208ENST00000428599 TOMM40O96008 361 aa7.46□□□□□ -1.22
CTNND1-208ENST00000428599 SRD5A1P18405 259 aa7.46□□□□□ -1.22
CTNND1-208ENST00000428599 MIR17HGQ75NE6 70 aa7.46□□□□□ -1.22
CTNND1-208ENST00000428599 TNFRSF14Q92956 283 aa7.46□□□□□ -1.22
CTNND1-208ENST00000428599 PPP1R3EQ9H7J1 279 aa7.46□□□□□ -1.22
CTNND1-208ENST00000428599 SCO2A0A1W2PP80 73 aa7.46□□□□□ -1.22
CTNND1-208ENST00000428599 YPEL1O60688 119 aa7.46□□□□□ -1.22
CTNND1-208ENST00000428599 ZNF660Q6AZW8 331 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-208ENST00000428599 YPEL2Q96QA6 119 aa7.46□□□□□ -1.22
CTNND1-208ENST00000428599 GVINP1Q7Z2Y8 2422 aa7.46□□□□□ -1.22
CTNND1-208ENST00000428599 TRAV9-1A0A075B6T8 112 aa7.46□□□□□ -1.22
CTNND1-208ENST00000428599 RPL35AP18077 110 aaKnown RBP7.46□□□□□ -1.22
CTNND1-208ENST00000428599 RPL36AP83881 106 aaKnown RBP7.46□□□□□ -1.22
CTNND1-208ENST00000428599 RPL36ALQ969Q0 106 aaKnown RBP7.46□□□□□ -1.22
CTNND1-208ENST00000428599 TM2D1Q9BX74 207 aa7.46□□□□□ -1.22
CTNND1-208ENST00000428599 MS4A6AQ9H2W1 248 aa7.46□□□□□ -1.22
CTNND1-208ENST00000428599 SPTBN2O15020 2390 aa7.45□□□□□ -1.22
CTNND1-208ENST00000428599 VWA8A3KMH1 1905 aa7.45□□□□□ -1.22
CTNND1-208ENST00000428599 TRAV2A0A0B4J234 112 aa7.45□□□□□ -1.22
CTNND1-208ENST00000428599 SRSF6Q13247 344 aaKnown RBP7.45□□□□□ -1.22
CTNND1-208ENST00000428599 LINC01590Q5TEZ4 76 aa7.45□□□□□ -1.22
CTNND1-208ENST00000428599 GFI1BQ5VTD9 330 aa7.45□□□□□ -1.22
CTNND1-208ENST00000428599 A0A0G2JK05 382 aa7.45□□□□□ -1.22
CTNND1-208ENST00000428599 TIMM23O14925 209 aa7.45□□□□□ -1.22
CTNND1-208ENST00000428599 PCP4P48539 62 aa7.45□□□□□ -1.22
CTNND1-208ENST00000428599 RCC1LQ96I51 464 aaKnown RBP7.45□□□□□ -1.22
CTNND1-208ENST00000428599 CHTOPQ9Y3Y2 248 aaKnown RBP7.45□□□□□ -1.22
CTNND1-208ENST00000428599 TRAV8-2A0A0B4J237 113 aa7.45□□□□□ -1.22
CTNND1-208ENST00000428599 SLC17A3O00476 420 aa7.45□□□□□ -1.22
CTNND1-208ENST00000428599 CELA3BP08861 270 aa7.45□□□□□ -1.22
CTNND1-208ENST00000428599 LINC00614P0C842 121 aa7.45□□□□□ -1.22
CTNND1-208ENST00000428599 SIP14410 1827 aa7.45□□□□□ -1.22
CTNND1-208ENST00000428599 COL4A6Q14031 1691 aa7.45□□□□□ -1.22
CTNND1-208ENST00000428599 TMEM144Q7Z5S9 345 aa7.45□□□□□ -1.22
CTNND1-208ENST00000428599 C15orf61A6NNL5 157 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 GNLYP22749 145 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 CD24P25063 80 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 VMO1Q7Z5L0 202 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 PUSL1Q8N0Z8 303 aaKnown RBP7.44□□□□□ -1.22
CTNND1-208ENST00000428599 TRGV1A0A0A0MS02 117 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 PPBPP02775 128 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 DDTP30046 118 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 WFIKKN1Q96NZ8 548 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 NRN1Q9NPD7 142 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 PRCDQ00LT1 54 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 F2Z2F3 143 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 LYNX1G3V0Z9 82 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms