RNA–Protein interactions for RNA: ENST00000428394.6

HCLS1-202, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 2 BASIC

Gene HCLS1, Length 1,560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-202ENST00000428394 PCNX2A6NKB5 2137 aa13.7□□□□□ -0.22
HCLS1-202ENST00000428394 IGHV1-46P01743 117 aa13.7□□□□□ -0.22
HCLS1-202ENST00000428394 HIST1H1EP10412 219 aaKnown RBP13.7□□□□□ -0.22
HCLS1-202ENST00000428394 DOLPP1Q86YN1 238 aa13.7□□□□□ -0.22
HCLS1-202ENST00000428394 ZADH2Q8N4Q0 377 aa13.7□□□□□ -0.22
HCLS1-202ENST00000428394 DEFB124Q8NES8 71 aa13.7□□□□□ -0.22
HCLS1-202ENST00000428394 SAP30LQ9HAJ7 183 aa13.7□□□□□ -0.22
HCLS1-202ENST00000428394 AMMECR1Q9Y4X0 333 aaPredicted RBP13.7□□□□□ -0.22
HCLS1-202ENST00000428394 COX7A2P2O60397 106 aa13.69□□□□□ -0.22
HCLS1-202ENST00000428394 CDKN1AP38936 164 aa13.69□□□□□ -0.22
HCLS1-202ENST00000428394 C10orf113Q5VZT2 155 aa13.69□□□□□ -0.22
HCLS1-202ENST00000428394 PVRIGQ6DKI7 326 aa13.69□□□□□ -0.22
HCLS1-202ENST00000428394 SEM1Q6ZVN7 128 aa13.69□□□□□ -0.22
HCLS1-202ENST00000428394 OR4C13Q8NGP0 309 aa13.69□□□□□ -0.22
HCLS1-202ENST00000428394 TMEM186Q96B77 213 aa13.69□□□□□ -0.22
HCLS1-202ENST00000428394 RNASE7Q9H1E1 156 aaKnown RBP13.69□□□□□ -0.22
HCLS1-202ENST00000428394 ZFHX4Q86UP3 3567 aa13.69□□□□□ -0.22
HCLS1-202ENST00000428394 CFAP47Q6ZTR5 3102 aa13.69□□□□□ -0.22
HCLS1-202ENST00000428394 H0YJW9 148 aa13.68□□□□□ -0.22
HCLS1-202ENST00000428394 PEX7O00628 323 aa13.68□□□□□ -0.22
HCLS1-202ENST00000428394 NKX2-8O15522 239 aa13.68□□□□□ -0.22
HCLS1-202ENST00000428394 ZNF25P17030 456 aaPredicted RBP13.68□□□□□ -0.22
HCLS1-202ENST00000428394 ZNF137PP52743 207 aa13.68□□□□□ -0.22
HCLS1-202ENST00000428394 C1orf185Q5T7R7 199 aa13.68□□□□□ -0.22
HCLS1-202ENST00000428394 OR10X1Q8NGY0 326 aa13.68□□□□□ -0.22
HCLS1-202ENST00000428394 LEAP2Q969E1 77 aa13.68□□□□□ -0.22
HCLS1-202ENST00000428394 BORCS7Q96B45 105 aa13.68□□□□□ -0.22
HCLS1-202ENST00000428394 HARBI1Q96MB7 349 aa13.68□□□□□ -0.22
HCLS1-202ENST00000428394 PAXXQ9BUH6 204 aa13.68□□□□□ -0.22
HCLS1-202ENST00000428394 ASCL3Q9NQ33 180 aa13.68□□□□□ -0.22
HCLS1-202ENST00000428394 PAM16Q9Y3D7 125 aa13.68□□□□□ -0.22
HCLS1-202ENST00000428394 SRIP30626 198 aa13.67□□□□□ -0.22
HCLS1-202ENST00000428394 KRTDAPP60985 99 aa13.67□□□□□ -0.22
HCLS1-202ENST00000428394 TBR1Q16650 682 aa13.67□□□□□ -0.22
HCLS1-202ENST00000428394 ZNF474Q6S9Z5 364 aaPredicted RBP13.67□□□□□ -0.22
HCLS1-202ENST00000428394 ZNF329Q86UD4 541 aa13.67□□□□□ -0.22
HCLS1-202ENST00000428394 OR9G1Q8NH87 305 aa13.67□□□□□ -0.22
HCLS1-202ENST00000428394 TSKUQ8WUA8 353 aa13.67□□□□□ -0.22
HCLS1-202ENST00000428394 FLYWCH2Q96CP2 140 aaKnown RBP13.67□□□□□ -0.22
HCLS1-202ENST00000428394 C1RLQ9NZP8 487 aa13.67□□□□□ -0.22
HCLS1-202ENST00000428394 GOLT1BQ9Y3E0 138 aa13.67□□□□□ -0.22
HCLS1-202ENST00000428394 KLF12Q9Y4X4 402 aa13.67□□□□□ -0.22
HCLS1-202ENST00000428394 ATRXP46100 2492 aa13.67□□□□□ -0.22
HCLS1-202ENST00000428394 SRRM4A7MD48 611 aaKnown RBP13.66□□□□□ -0.22
HCLS1-202ENST00000428394 IGKV1-16P04430 117 aa13.66□□□□□ -0.22
HCLS1-202ENST00000428394 MGST1P10620 155 aaKnown RBP13.66□□□□□ -0.22
HCLS1-202ENST00000428394 MC5RP33032 325 aa13.66□□□□□ -0.22
HCLS1-202ENST00000428394 MYCNOSP40205 109 aa13.66□□□□□ -0.22
HCLS1-202ENST00000428394 GNG10P50151 68 aa13.66□□□□□ -0.22
HCLS1-202ENST00000428394 PERPQ96FX8 193 aa13.66□□□□□ -0.22
HCLS1-202ENST00000428394 TMEM208Q9BTX3 173 aa13.66□□□□□ -0.22
HCLS1-202ENST00000428394 ZNF492Q9P255 531 aa13.66□□□□□ -0.22
HCLS1-202ENST00000428394 DSCAMO60469 2012 aa13.66□□□□□ -0.22
HCLS1-202ENST00000428394 HEATR1Q9H583 2144 aaKnown RBP13.66□□□□□ -0.22
HCLS1-202ENST00000428394 FAM231BA6NCW3 169 aa13.66□□□□□ -0.22
HCLS1-202ENST00000428394 IGHV3-7P01780 117 aa13.66□□□□□ -0.22
HCLS1-202ENST00000428394 SPATA45Q537H7 98 aa13.66□□□□□ -0.22
HCLS1-202ENST00000428394 NIT1Q86X76 327 aa13.66□□□□□ -0.22
HCLS1-202ENST00000428394 C18orf32Q8TCD1 76 aa13.66□□□□□ -0.22
HCLS1-202ENST00000428394 C22orf15Q8WYQ4 148 aa13.66□□□□□ -0.22
HCLS1-202ENST00000428394 CCL13Q99616 98 aa13.66□□□□□ -0.22
HCLS1-202ENST00000428394 MRPS16Q9Y3D3 137 aaKnown RBP13.66□□□□□ -0.22
HCLS1-202ENST00000428394 YLPM1P49750 1951 aaKnown RBP13.66□□□□□ -0.22
HCLS1-202ENST00000428394 FAM208BQ5VWN6 2430 aa13.65□□□□□ -0.22
HCLS1-202ENST00000428394 SPAARA0A1B0GVQ0 90 aa13.65□□□□□ -0.22
HCLS1-202ENST00000428394 DPRXA6NFQ7 191 aa13.65□□□□□ -0.22
HCLS1-202ENST00000428394 CORTO00230 105 aa13.65□□□□□ -0.22
HCLS1-202ENST00000428394 FTH1P19P0C7X4 201 aa13.65□□□□□ -0.22
HCLS1-202ENST00000428394 IGLC2P0DOY2 106 aa13.65□□□□□ -0.22
HCLS1-202ENST00000428394 IGLC3P0DOY3 106 aa13.65□□□□□ -0.22
HCLS1-202ENST00000428394 CEACAM8P31997 349 aaPredicted RBP13.65□□□□□ -0.22
HCLS1-202ENST00000428394 VMA21Q3ZAQ7 101 aa13.65□□□□□ -0.22
HCLS1-202ENST00000428394 SPRNQ5BIV9 151 aa13.65□□□□□ -0.22
HCLS1-202ENST00000428394 ZCCHC24Q8N2G6 241 aaKnown RBP13.65□□□□□ -0.22
HCLS1-202ENST00000428394 ATG101Q9BSB4 218 aa13.65□□□□□ -0.22
HCLS1-202ENST00000428394 GFRA4Q9GZZ7 299 aa13.65□□□□□ -0.22
HCLS1-202ENST00000428394 LPAR2Q9HBW0 351 aa13.65□□□□□ -0.22
HCLS1-202ENST00000428394 ZNF355PQ9NSJ1 428 aa13.65□□□□□ -0.22
HCLS1-202ENST00000428394 SERTAD4Q9NUC0 356 aa13.65□□□□□ -0.22
HCLS1-202ENST00000428394 ZFP30Q9Y2G7 519 aa13.65□□□□□ -0.22
HCLS1-202ENST00000428394 WASHC3Q9Y3C0 194 aa13.65□□□□□ -0.22
HCLS1-202ENST00000428394 SPEGQ15772 3267 aa13.65□□□□□ -0.22
HCLS1-202ENST00000428394 RAI1Q7Z5J4 1906 aaPredicted RBP13.65□□□□□ -0.22
HCLS1-202ENST00000428394 F2Z2F3 143 aa13.64□□□□□ -0.23
HCLS1-202ENST00000428394 CRYGCP07315 174 aa13.64□□□□□ -0.23
HCLS1-202ENST00000428394 LGALS7P47929 136 aa13.64□□□□□ -0.23
HCLS1-202ENST00000428394 FXYD3Q14802 87 aa13.64□□□□□ -0.23
HCLS1-202ENST00000428394 FXYD5Q96DB9 178 aa13.64□□□□□ -0.23
HCLS1-202ENST00000428394 TRGV9Q99603 122 aa13.64□□□□□ -0.23
HCLS1-202ENST00000428394 MRPL20Q9BYC9 149 aaKnown RBP13.64□□□□□ -0.23
HCLS1-202ENST00000428394 SSUH2Q9Y2M2 353 aa13.64□□□□□ -0.23
HCLS1-202ENST00000428394 INTS1Q8N201 2190 aaKnown RBP13.64□□□□□ -0.23
HCLS1-202ENST00000428394 CEP295Q9C0D2 2601 aa13.64□□□□□ -0.23
HCLS1-202ENST00000428394 A0A1B0GXF2 115 aa13.63□□□□□ -0.23
HCLS1-202ENST00000428394 C3orf79P0CE67 100 aa13.63□□□□□ -0.23
HCLS1-202ENST00000428394 MYOD1P15172 320 aa13.63□□□□□ -0.23
HCLS1-202ENST00000428394 CD40P25942 277 aa13.63□□□□□ -0.23
HCLS1-202ENST00000428394 PLP1P60201 277 aa13.63□□□□□ -0.23
HCLS1-202ENST00000428394 UTF1Q5T230 341 aa13.63□□□□□ -0.23
HCLS1-202ENST00000428394 MRPL54Q6P161 138 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms