RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 TRAV30A0A087WSZ9 112 aa12.7□□□□□ -0.38
DDR1-235ENST00000428153 A0A1B0GU03 582 aa12.7□□□□□ -0.38
DDR1-235ENST00000428153 M0QYG6 137 aa12.7□□□□□ -0.38
DDR1-235ENST00000428153 HPGDSO60760 199 aa12.7□□□□□ -0.38
DDR1-235ENST00000428153 SPP1P10451 314 aa12.7□□□□□ -0.38
DDR1-235ENST00000428153 UCP1P25874 307 aa12.7□□□□□ -0.38
DDR1-235ENST00000428153 RPL11P62913 178 aaKnown RBP12.7□□□□□ -0.38
DDR1-235ENST00000428153 IZUMO4Q1ZYL8 232 aa12.7□□□□□ -0.38
DDR1-235ENST00000428153 AARDQ4LEZ3 155 aa12.7□□□□□ -0.38
DDR1-235ENST00000428153 MORN3Q6PF18 240 aaPredicted RBP12.7□□□□□ -0.38
DDR1-235ENST00000428153 FAM219AQ8IW50 185 aa12.7□□□□□ -0.38
DDR1-235ENST00000428153 AP3S1Q92572 193 aa12.7□□□□□ -0.38
DDR1-235ENST00000428153 RRNAD1Q96FB5 475 aaKnown RBP12.7□□□□□ -0.38
DDR1-235ENST00000428153 NARS2Q96I59 477 aaKnown RBP12.7□□□□□ -0.38
DDR1-235ENST00000428153 ENY2Q9NPA8 101 aa12.7□□□□□ -0.38
DDR1-235ENST00000428153 MTFP1Q9UDX5 166 aa12.7□□□□□ -0.38
DDR1-235ENST00000428153 K7EQG2 157 aa12.69□□□□□ -0.38
DDR1-235ENST00000428153 HOXA1P49639 335 aaPredicted RBP12.69□□□□□ -0.38
DDR1-235ENST00000428153 VBP1P61758 197 aa12.69□□□□□ -0.38
DDR1-235ENST00000428153 SPINK9Q5DT21 86 aa12.69□□□□□ -0.38
DDR1-235ENST00000428153 OR52E5Q8NH55 327 aa12.69□□□□□ -0.38
DDR1-235ENST00000428153 TERB2Q8NHR7 220 aa12.69□□□□□ -0.38
DDR1-235ENST00000428153 FNDC4Q9H6D8 234 aaPredicted RBP12.69□□□□□ -0.38
DDR1-235ENST00000428153 COPZ2Q9P299 210 aa12.69□□□□□ -0.38
DDR1-235ENST00000428153 KLK11Q9UBX7 282 aa12.69□□□□□ -0.38
DDR1-235ENST00000428153 FBXL17Q9UF56 701 aa12.69□□□□□ -0.38
DDR1-235ENST00000428153 DEDDO75618 318 aa12.68□□□□□ -0.38
DDR1-235ENST00000428153 CD3DP04234 171 aa12.68□□□□□ -0.38
DDR1-235ENST00000428153 MIFP14174 115 aa12.68□□□□□ -0.38
DDR1-235ENST00000428153 PI3P19957 117 aa12.68□□□□□ -0.38
DDR1-235ENST00000428153 OPRK1P41145 380 aa12.68□□□□□ -0.38
DDR1-235ENST00000428153 EIF2B2P49770 351 aaKnown RBP12.68□□□□□ -0.38
DDR1-235ENST00000428153 TRIM16LQ309B1 348 aa12.68□□□□□ -0.38
DDR1-235ENST00000428153 LEMD1Q68G75 181 aa12.68□□□□□ -0.38
DDR1-235ENST00000428153 TRPT1Q86TN4 253 aaKnown RBP12.68□□□□□ -0.38
DDR1-235ENST00000428153 FAM24BQ8N5W8 94 aa12.68□□□□□ -0.38
DDR1-235ENST00000428153 Q8NAQ8 132 aa12.68□□□□□ -0.38
DDR1-235ENST00000428153 RABAC1Q9UI14 185 aa12.68□□□□□ -0.38
DDR1-235ENST00000428153 DNAH6Q9C0G6 4158 aa12.68□□□□□ -0.38
DDR1-235ENST00000428153 RPS10-NUDT3A0A1W2PQS6 291 aa12.67□□□□□ -0.38
DDR1-235ENST00000428153 ZNF705EA8MWA4 302 aaPredicted RBP12.67□□□□□ -0.38
DDR1-235ENST00000428153 FAM25AB3EWG3 89 aa12.67□□□□□ -0.38
DDR1-235ENST00000428153 FAM25CB3EWG5 89 aa12.67□□□□□ -0.38
DDR1-235ENST00000428153 FAM25GB3EWG6 89 aa12.67□□□□□ -0.38
DDR1-235ENST00000428153 CD74P04233 296 aa12.67□□□□□ -0.38
DDR1-235ENST00000428153 ETV6P41212 452 aa12.67□□□□□ -0.38
DDR1-235ENST00000428153 HTR2BP41595 481 aa12.67□□□□□ -0.38
DDR1-235ENST00000428153 P2RY1P47900 373 aa12.67□□□□□ -0.38
DDR1-235ENST00000428153 SPCS3P61009 180 aa12.67□□□□□ -0.38
DDR1-235ENST00000428153 OR52I2Q8NH67 350 aa12.67□□□□□ -0.38
DDR1-235ENST00000428153 DCANP1Q8TF63 244 aa12.67□□□□□ -0.38
DDR1-235ENST00000428153 IGHV3-66A0A0C4DH42 116 aa12.66□□□□□ -0.38
DDR1-235ENST00000428153 CDS2O95674 445 aa12.66□□□□□ -0.38
DDR1-235ENST00000428153 IGKV1-17P01599 117 aa12.66□□□□□ -0.38
DDR1-235ENST00000428153 GIG44P09565 113 aaPredicted RBP12.66□□□□□ -0.38
DDR1-235ENST00000428153 AP2S1P53680 142 aaPredicted RBP12.66□□□□□ -0.38
DDR1-235ENST00000428153 SSBP1Q04837 148 aaKnown RBP12.66□□□□□ -0.38
DDR1-235ENST00000428153 TMEM229BQ8NBD8 167 aa12.66□□□□□ -0.38
DDR1-235ENST00000428153 RNASEH2CQ8TDP1 164 aaKnown RBP12.66□□□□□ -0.38
DDR1-235ENST00000428153 TMEM230Q96A57 120 aa12.66□□□□□ -0.38
DDR1-235ENST00000428153 SEPSECSQ9HD40 501 aaKnown RBP12.66□□□□□ -0.38
DDR1-235ENST00000428153 MRPL36Q9P0J6 103 aaKnown RBP12.66□□□□□ -0.38
DDR1-235ENST00000428153 CACFD1Q9UGQ2 172 aa12.66□□□□□ -0.38
DDR1-235ENST00000428153 U3KQE9 123 aa12.66□□□□□ -0.38
DDR1-235ENST00000428153 HELTA6NFD8 242 aa12.65□□□□□ -0.38
DDR1-235ENST00000428153 SLC25A4P12235 298 aa12.65□□□□□ -0.38
DDR1-235ENST00000428153 ZNF182P17025 639 aaPredicted RBP12.65□□□□□ -0.38
DDR1-235ENST00000428153 TAS2R19P59542 299 aa12.65□□□□□ -0.38
DDR1-235ENST00000428153 MRPS10P82664 201 aaKnown RBP12.65□□□□□ -0.38
DDR1-235ENST00000428153 STXBP6Q8NFX7 210 aa12.65□□□□□ -0.38
DDR1-235ENST00000428153 OR1S2Q8NGQ3 325 aa12.65□□□□□ -0.38
DDR1-235ENST00000428153 OR13C8Q8NGS7 320 aa12.65□□□□□ -0.38
DDR1-235ENST00000428153 ABHD1Q96SE0 405 aa12.65□□□□□ -0.38
DDR1-235ENST00000428153 TMEM222Q9H0R3 208 aa12.65□□□□□ -0.38
DDR1-235ENST00000428153 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.65□□□□□ -0.38
DDR1-235ENST00000428153 EXTL2Q9UBQ6 330 aa12.65□□□□□ -0.38
DDR1-235ENST00000428153 AGRNO00468 2067 aa12.65□□□□□ -0.39
DDR1-235ENST00000428153 HERC2O95714 4834 aa12.64□□□□□ -0.39
DDR1-235ENST00000428153 A0A0G2JRQ6 117 aa12.64□□□□□ -0.39
DDR1-235ENST00000428153 GABARAPO95166 117 aa12.64□□□□□ -0.39
DDR1-235ENST00000428153 PPP5CP53041 499 aa12.64□□□□□ -0.39
DDR1-235ENST00000428153 YPEL3P61236 119 aaPredicted RBP12.64□□□□□ -0.39
DDR1-235ENST00000428153 SURF2Q15527 256 aaPredicted RBP12.64□□□□□ -0.39
DDR1-235ENST00000428153 SP6Q3SY56 376 aa12.64□□□□□ -0.39
DDR1-235ENST00000428153 C2orf83Q53S99 150 aa12.64□□□□□ -0.39
DDR1-235ENST00000428153 RNASE11Q8TAA1 199 aaKnown RBP12.64□□□□□ -0.39
DDR1-235ENST00000428153 RBPMSQ93062 196 aaKnown RBP12.64□□□□□ -0.39
DDR1-235ENST00000428153 APLNQ9ULZ1 77 aa12.64□□□□□ -0.39
DDR1-235ENST00000428153 IGHV4-28A0A0C4DH34 117 aa12.63□□□□□ -0.39
DDR1-235ENST00000428153 GABARAPH6UMI1 98 aa12.63□□□□□ -0.39
DDR1-235ENST00000428153 DEFB4AO15263 64 aa12.63□□□□□ -0.39
DDR1-235ENST00000428153 RAB3DO95716 219 aa12.63□□□□□ -0.39
DDR1-235ENST00000428153 ZNF688P0C7X2 276 aa12.63□□□□□ -0.39
DDR1-235ENST00000428153 IGLC1P0CG04 106 aa12.63□□□□□ -0.39
DDR1-235ENST00000428153 STEAP1BQ6NZ63 245 aa12.63□□□□□ -0.39
DDR1-235ENST00000428153 Q6ZRM9 215 aa12.63□□□□□ -0.39
DDR1-235ENST00000428153 NOXA1Q86UR1 476 aa12.63□□□□□ -0.39
DDR1-235ENST00000428153 CENPSQ8N2Z9 138 aa12.63□□□□□ -0.39
DDR1-235ENST00000428153 OR4D10Q8NGI6 311 aa12.63□□□□□ -0.39
DDR1-235ENST00000428153 Q8WTZ3 238 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms