RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 COMMD5Q9GZQ3 224 aa12.68□□□□□ -0.38
TVP23C-203ENST00000428082 SEPSECSQ9HD40 501 aaKnown RBP12.68□□□□□ -0.38
TVP23C-203ENST00000428082 NAV2Q8IVL1 2488 aa12.68□□□□□ -0.38
TVP23C-203ENST00000428082 TRAV20A0A0B4J274 112 aa12.67□□□□□ -0.38
TVP23C-203ENST00000428082 A0A0U1RQK1 487 aa12.67□□□□□ -0.38
TVP23C-203ENST00000428082 SCO2A0A1W2PP80 73 aa12.67□□□□□ -0.38
TVP23C-203ENST00000428082 ZNF320A2RRD8 509 aa12.67□□□□□ -0.38
TVP23C-203ENST00000428082 NDUFB3O43676 98 aa12.67□□□□□ -0.38
TVP23C-203ENST00000428082 MMP23AO75900 390 aa12.67□□□□□ -0.38
TVP23C-203ENST00000428082 LINC00869P0C866 280 aa12.67□□□□□ -0.38
TVP23C-203ENST00000428082 USF1P22415 310 aaPredicted RBP12.67□□□□□ -0.38
TVP23C-203ENST00000428082 IL3RAP26951 378 aa12.67□□□□□ -0.38
TVP23C-203ENST00000428082 RPL19P84098 196 aaKnown RBP12.67□□□□□ -0.38
TVP23C-203ENST00000428082 LINC00311Q8N616 119 aa12.67□□□□□ -0.38
TVP23C-203ENST00000428082 TMEM186Q96B77 213 aa12.67□□□□□ -0.38
TVP23C-203ENST00000428082 NABP2Q9BQ15 211 aa12.67□□□□□ -0.38
TVP23C-203ENST00000428082 BEX4Q9NWD9 120 aaPredicted RBP12.67□□□□□ -0.38
TVP23C-203ENST00000428082 YTHDF2Q9Y5A9 579 aaKnown RBP12.67□□□□□ -0.38
TVP23C-203ENST00000428082 SAA1P0DJI8 122 aaPredicted RBP12.66□□□□□ -0.38
TVP23C-203ENST00000428082 CNN1P51911 297 aaKnown RBP12.66□□□□□ -0.38
TVP23C-203ENST00000428082 JOSD1Q15040 202 aaPredicted RBP12.66□□□□□ -0.38
TVP23C-203ENST00000428082 LRRC10Q5BKY1 277 aa12.66□□□□□ -0.38
TVP23C-203ENST00000428082 CLEC2AQ6UVW9 174 aa12.66□□□□□ -0.38
TVP23C-203ENST00000428082 ZNF841Q6ZN19 808 aa12.66□□□□□ -0.38
TVP23C-203ENST00000428082 PDPNQ86YL7 162 aa12.66□□□□□ -0.38
TVP23C-203ENST00000428082 OR5AN1Q8NGI8 311 aa12.66□□□□□ -0.38
TVP23C-203ENST00000428082 C10orf105Q8TEF2 133 aa12.66□□□□□ -0.38
TVP23C-203ENST00000428082 TMEM18Q96B42 140 aa12.66□□□□□ -0.38
TVP23C-203ENST00000428082 FLYWCH2Q96CP2 140 aaKnown RBP12.66□□□□□ -0.38
TVP23C-203ENST00000428082 DERL1Q9BUN8 251 aa12.66□□□□□ -0.38
TVP23C-203ENST00000428082 TRAPPC1Q9Y5R8 145 aa12.66□□□□□ -0.38
TVP23C-203ENST00000428082 ITPR2Q14571 2701 aa12.66□□□□□ -0.38
TVP23C-203ENST00000428082 GCGP01275 180 aa12.66□□□□□ -0.38
TVP23C-203ENST00000428082 IGKV1-16P04430 117 aa12.66□□□□□ -0.38
TVP23C-203ENST00000428082 PKIAP61925 76 aa12.66□□□□□ -0.38
TVP23C-203ENST00000428082 SGMS2Q8NHU3 365 aa12.66□□□□□ -0.38
TVP23C-203ENST00000428082 TMEM37Q8WXS4 190 aa12.66□□□□□ -0.38
TVP23C-203ENST00000428082 HARBI1Q96MB7 349 aa12.66□□□□□ -0.38
TVP23C-203ENST00000428082 PIMREGQ9BSJ6 248 aa12.66□□□□□ -0.38
TVP23C-203ENST00000428082 MRPL32Q9BYC8 188 aaKnown RBP12.66□□□□□ -0.38
TVP23C-203ENST00000428082 CSMD1Q96PZ7 3565 aa12.65□□□□□ -0.38
TVP23C-203ENST00000428082 TSTD3H0UI37 97 aa12.65□□□□□ -0.38
TVP23C-203ENST00000428082 H0YJW9 148 aa12.65□□□□□ -0.38
TVP23C-203ENST00000428082 RNASE2P10153 161 aaKnown RBP12.65□□□□□ -0.38
TVP23C-203ENST00000428082 SUB1P53999 127 aaKnown RBP eCLIP12.65□□□□□ -0.38
TVP23C-203ENST00000428082 RPL8P62917 257 aaKnown RBP12.65□□□□□ -0.38
TVP23C-203ENST00000428082 CD69Q07108 199 aa12.65□□□□□ -0.38
TVP23C-203ENST00000428082 CLEC12BQ2HXU8 276 aa12.65□□□□□ -0.38
TVP23C-203ENST00000428082 TEX38Q6PEX7 206 aa12.65□□□□□ -0.38
TVP23C-203ENST00000428082 LURAP1LQ8IV03 231 aa12.65□□□□□ -0.38
TVP23C-203ENST00000428082 OR4C13Q8NGP0 309 aa12.65□□□□□ -0.38
TVP23C-203ENST00000428082 ZNF596Q8TC21 504 aa12.65□□□□□ -0.38
TVP23C-203ENST00000428082 TET2Q6N021 2002 aaPredicted RBP12.65□□□□□ -0.38
TVP23C-203ENST00000428082 MALRD1Q5VYJ5 2156 aa12.65□□□□□ -0.39
TVP23C-203ENST00000428082 MAP1AP78559 2803 aaPredicted RBP12.64□□□□□ -0.39
TVP23C-203ENST00000428082 IGHV4-30-2A0A087WSY4 118 aa12.64□□□□□ -0.39
TVP23C-203ENST00000428082 SRRM4A7MD48 611 aaKnown RBP12.64□□□□□ -0.39
TVP23C-203ENST00000428082 NDUFS8O00217 210 aa12.64□□□□□ -0.39
TVP23C-203ENST00000428082 AMBPP02760 352 aa12.64□□□□□ -0.39
TVP23C-203ENST00000428082 OR5G3P0C626 314 aa12.64□□□□□ -0.39
TVP23C-203ENST00000428082 RPL15P61313 204 aaKnown RBP12.64□□□□□ -0.39
TVP23C-203ENST00000428082 MRPL41Q8IXM3 137 aaKnown RBP12.64□□□□□ -0.39
TVP23C-203ENST00000428082 OR8B3Q8NGG8 313 aa12.64□□□□□ -0.39
TVP23C-203ENST00000428082 OCC1Q8TAD7 63 aa12.64□□□□□ -0.39
TVP23C-203ENST00000428082 TMEM167AQ8TBQ9 72 aa12.64□□□□□ -0.39
TVP23C-203ENST00000428082 OR8B2Q96RD0 313 aa12.64□□□□□ -0.39
TVP23C-203ENST00000428082 MRPL20Q9BYC9 149 aaKnown RBP12.64□□□□□ -0.39
TVP23C-203ENST00000428082 NDUFA4L2Q9NRX3 87 aa12.64□□□□□ -0.39
TVP23C-203ENST00000428082 IL36BQ9NZH7 164 aa12.64□□□□□ -0.39
TVP23C-203ENST00000428082 VWC2LB2RUY7 222 aa12.64□□□□□ -0.39
TVP23C-203ENST00000428082 GAMTQ14353 236 aa12.64□□□□□ -0.39
TVP23C-203ENST00000428082 PSG5Q15238 335 aa12.64□□□□□ -0.39
TVP23C-203ENST00000428082 HLA-DRB5Q30154 266 aa12.64□□□□□ -0.39
TVP23C-203ENST00000428082 SPATA31B1PQ5VZV4 182 aa12.64□□□□□ -0.39
TVP23C-203ENST00000428082 TMEM200BQ69YZ2 307 aa12.64□□□□□ -0.39
TVP23C-203ENST00000428082 LRRC75A-AS1Q8N1F1 130 aa12.64□□□□□ -0.39
TVP23C-203ENST00000428082 OR10X1Q8NGY0 326 aa12.64□□□□□ -0.39
TVP23C-203ENST00000428082 H1FXQ92522 213 aaKnown RBP12.64□□□□□ -0.39
TVP23C-203ENST00000428082 MBD6Q96DN6 1003 aa12.64□□□□□ -0.39
TVP23C-203ENST00000428082 PRDM13Q9H4Q3 707 aa12.64□□□□□ -0.39
TVP23C-203ENST00000428082 PDZD2O15018 2839 aa12.64□□□□□ -0.39
TVP23C-203ENST00000428082 TRBV20OR9-2A0A075B6H5 130 aa12.63□□□□□ -0.39
TVP23C-203ENST00000428082 MYOD1P15172 320 aa12.63□□□□□ -0.39
TVP23C-203ENST00000428082 OR10J1P30954 320 aa12.63□□□□□ -0.39
TVP23C-203ENST00000428082 MC5RP33032 325 aa12.63□□□□□ -0.39
TVP23C-203ENST00000428082 YPEL3P61236 119 aaPredicted RBP12.63□□□□□ -0.39
TVP23C-203ENST00000428082 DEFA6Q01524 100 aa12.63□□□□□ -0.39
TVP23C-203ENST00000428082 MIR17HGQ75NE6 70 aa12.63□□□□□ -0.39
TVP23C-203ENST00000428082 ZNF114Q8NC26 417 aa12.63□□□□□ -0.39
TVP23C-203ENST00000428082 ARHGAP32A7KAX9 2087 aa12.62□□□□□ -0.39
TVP23C-203ENST00000428082 FOXH1O75593 365 aa12.62□□□□□ -0.39
TVP23C-203ENST00000428082 DSCR9P59020 149 aa12.62□□□□□ -0.39
TVP23C-203ENST00000428082 ZNF90Q03938 601 aa12.62□□□□□ -0.39
TVP23C-203ENST00000428082 FAM209BQ5JX69 171 aa12.62□□□□□ -0.39
TVP23C-203ENST00000428082 EAF1Q96JC9 268 aaPredicted RBP12.62□□□□□ -0.39
TVP23C-203ENST00000428082 AURKAIP1Q9NWT8 199 aaPredicted RBP12.62□□□□□ -0.39
TVP23C-203ENST00000428082 WASHC3Q9Y3C0 194 aa12.62□□□□□ -0.39
TVP23C-203ENST00000428082 A0A1W2PRE2 83 aa12.62□□□□□ -0.39
TVP23C-203ENST00000428082 HELTA6NFD8 242 aa12.62□□□□□ -0.39
TVP23C-203ENST00000428082 ACTL6BO94805 426 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms